RNA–Protein interactions for RNA: ENSMUST00000071057.13

Ddx55-201, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx55, Length 2,799 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-201ENSMUST00000071057 Q9D4A5 307 aa11.77□□□□□ -0.53
Ddx55-201ENSMUST00000071057 PirQ9D711 290 aa11.77□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Iqcf1Q9D9K8 182 aa11.77□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Mrpl4Q9DCU6 294 aaKnown RBP11.77□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Dnajc12Q9R022 198 aa11.77□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Spata31d1aE9QA35 1336 aa11.77□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Zfp990B1AVN5 605 aa11.77□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Gm6133B2RY53 190 aa11.77□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Apol11aE9PZG0 334 aa11.77□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Rbp3P49194 1234 aa11.77□□□□□ -0.53
Ddx55-201ENSMUST00000071057 PtpreP49446 699 aa11.77□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Q3UTZ3 580 aa11.77□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Tnfaip2Q61333 691 aa11.77□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Kiaa1328Q6NZK5 612 aa11.77□□□□□ -0.53
Ddx55-201ENSMUST00000071057 L3mbtl3Q8BLB7 883 aa11.77□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Samd3Q8C4H2 520 aa11.77□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Tp53inp2Q8CFU8 221 aa11.77□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Mnd1Q8K396 205 aa11.77□□□□□ -0.53
Ddx55-201ENSMUST00000071057 OafQ8QZR4 282 aa11.77□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Brd8Q8R3B7 951 aa11.77□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Snrnp25Q8VIK1 123 aa11.77□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Epn3Q91W69 636 aa11.77□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Pcdha10Q91Y20 946 aa11.77□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Lrrc49Q91YK0 686 aa11.77□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Ank3G5E8K5 1961 aa11.77□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Arrdc4A0A0B4J1F4 415 aa11.76□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Lonrf1D3YY23 762 aa11.76□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Cyp4f40G3UW81 524 aa11.76□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Itgb3O54890 787 aa11.76□□□□□ -0.53
Ddx55-201ENSMUST00000071057 IkbkgO88522 412 aa11.76□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Ercc5P35689 1170 aa11.76□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Gdi1P50396 447 aa11.76□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Lhx5P61375 402 aa11.76□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Aars2Q14CH7 980 aa11.76□□□□□ -0.53
Ddx55-201ENSMUST00000071057 9130409I23RikQ3TS87 320 aa11.76□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Mpzl3Q3V3F6 237 aa11.76□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Srrm1Q52KI8 946 aaKnown RBP11.76□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Samhd1Q60710 627 aa11.76□□□□□ -0.53
Ddx55-201ENSMUST00000071057 March4Q80TE3 409 aa11.76□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Ttc29Q80VM3 471 aa11.76□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Wscd1Q80XH4 572 aa11.76□□□□□ -0.53
Ddx55-201ENSMUST00000071057 LppQ8BFW7 613 aa11.76□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Pum3Q8BKS9 647 aaKnown RBP11.76□□□□□ -0.53
Ddx55-201ENSMUST00000071057 UvragQ8K245 698 aa11.76□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Pomgnt1Q91X88 660 aa11.76□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Q9CQC3 228 aa11.76□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Psmg1Q9JK23 289 aa11.76□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Rfx8D3YU81 596 aa11.76□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Gm10721J3QPJ9 223 aa11.76□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Gm21833J3QPK1 500 aa11.76□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Ebf2O08792 575 aa11.76□□□□□ -0.53
Ddx55-201ENSMUST00000071057 PtgisO35074 501 aa11.76□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Mmp3P28862 477 aa11.76□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Nr2c2P49117 596 aa11.76□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Uchl4P58321 233 aa11.76□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Creb1Q01147 341 aaKnown RBP11.76□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Sox8Q04886 464 aa11.76□□□□□ -0.53
Ddx55-201ENSMUST00000071057 GsapQ3TCV3 858 aa11.76□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Nlrc4Q3UP24 1024 aa11.76□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Drc1Q3USS3 753 aa11.76□□□□□ -0.53
Ddx55-201ENSMUST00000071057 PoliQ6R3M4 717 aa11.76□□□□□ -0.53
Ddx55-201ENSMUST00000071057 VcpkmtQ8C436 228 aa11.76□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Vps37cQ8R105 352 aa11.76□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Ptcd2Q8R3K3 381 aaKnown RBP11.76□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Olfr1090Q8VGA6 313 aa11.76□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Hars2Q99KK9 505 aa11.76□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Polr3eQ9CZT4 710 aa11.76□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Caln1Q9JJG7 219 aa11.76□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Sgk1Q9WVC6 431 aa11.76□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Kiaa1522A2A7S8 1013 aa11.75□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Exoc7O35250 697 aa11.75□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Aimp1P31230 310 aaKnown RBP11.75□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Tap2P36371 702 aa11.75□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Stmn1P54227 149 aaKnown RBP11.75□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Gm13103Q4VAD2 491 aa11.75□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Xkr4Q5GH67 647 aa11.75□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Vmn2r26Q6TAC4 855 aa11.75□□□□□ -0.53
Ddx55-201ENSMUST00000071057 WtipQ7TQJ8 398 aa11.75□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Slc45a1Q8BIV7 751 aa11.75□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Q8BZE1 841 aa11.75□□□□□ -0.53
Ddx55-201ENSMUST00000071057 McmbpQ8R3C0 642 aa11.75□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Nsmce3Q9CPR8 279 aa11.75□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Pcyox1Q9CQF9 505 aa11.75□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Fam212aQ9CX62 282 aa11.75□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Gstt4Q9D4P7 240 aa11.75□□□□□ -0.53
Ddx55-201ENSMUST00000071057 1700123K08RikQ9D991 295 aa11.75□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Acsl4Q9QUJ7 711 aa11.75□□□□□ -0.53
Ddx55-201ENSMUST00000071057 VarsQ9Z1Q9 1263 aaKnown RBP11.75□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Ssxb9A2BI93 185 aa11.75□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Gm3460E9QAI8 215 aa11.75□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Itm2bO89051 266 aa11.75□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Casp8O89110 480 aa11.75□□□□□ -0.53
Ddx55-201ENSMUST00000071057 RxrbP28704 520 aa11.75□□□□□ -0.53
Ddx55-201ENSMUST00000071057 SbdsP70122 250 aa11.75□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Pde1bQ01065 535 aa11.75□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Nell1Q2VWQ2 810 aa11.75□□□□□ -0.53
Ddx55-201ENSMUST00000071057 PighQ5M9N4 188 aa11.75□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Txndc8Q69AB2 127 aa11.75□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Nlrp4aQ8BU40 982 aa11.75□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Slc9a4Q8BUE1 797 aa11.75□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 30.9 ms