Protein–RNA interactions for Protein: P58321

Uchl4, Ubiquitin carboxyl-terminal hydrolase isozyme L4, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uchl4P58321 Gm25239-201ENSMUST00000174915 86 ntBASIC40.11■■■■■ 4.01
Uchl4P58321 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC37.02■■■■□ 3.52
Uchl4P58321 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC36.48■■■■□ 3.43
Uchl4P58321 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC35.7■■■■□ 3.31
Uchl4P58321 Gm15042-201ENSMUST00000120212 883 ntBASIC35.23■■■■□ 3.23
Uchl4P58321 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.16
Uchl4P58321 Gm24109-201ENSMUST00000175489 103 ntBASIC34.67■■■■□ 3.14
Uchl4P58321 Gm15045-201ENSMUST00000117359 883 ntBASIC34.48■■■■□ 3.11
Uchl4P58321 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC34.46■■■■□ 3.11
Uchl4P58321 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC34.1■■■■□ 3.05
Uchl4P58321 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC33.81■■■■□ 3
Uchl4P58321 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC33.55■■■□□ 2.96
Uchl4P58321 Gm23366-201ENSMUST00000175022 89 ntBASIC33.5■■■□□ 2.95
Uchl4P58321 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
Uchl4P58321 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC33.32■■■□□ 2.92
Uchl4P58321 Psd-208ENSMUST00000224556 2034 ntBASIC33.31■■■□□ 2.92
Uchl4P58321 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC33.04■■■□□ 2.88
Uchl4P58321 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
Uchl4P58321 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.78■■■□□ 2.84
Uchl4P58321 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
Uchl4P58321 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32.62■■■□□ 2.81
Uchl4P58321 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
Uchl4P58321 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32.52■■■□□ 2.8
Uchl4P58321 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32.5■■■□□ 2.79
Uchl4P58321 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC32.45■■■□□ 2.78
Uchl4P58321 AC153911.1-202ENSMUST00000218534 1034 ntBASIC32.36■■■□□ 2.77
Uchl4P58321 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
Uchl4P58321 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
Uchl4P58321 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC32.24■■■□□ 2.75
Uchl4P58321 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC32.21■■■□□ 2.75
Uchl4P58321 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC32.15■■■□□ 2.74
Uchl4P58321 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Uchl4P58321 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Uchl4P58321 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Uchl4P58321 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31.89■■■□□ 2.7
Uchl4P58321 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Uchl4P58321 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.74■■■□□ 2.67
Uchl4P58321 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Uchl4P58321 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
Uchl4P58321 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Uchl4P58321 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31.61■■■□□ 2.65
Uchl4P58321 Gm25238-201ENSMUST00000174914 89 ntBASIC31.6■■■□□ 2.65
Uchl4P58321 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC31.51■■■□□ 2.63
Uchl4P58321 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Uchl4P58321 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Uchl4P58321 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
Uchl4P58321 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC31.13■■■□□ 2.57
Uchl4P58321 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Uchl4P58321 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Uchl4P58321 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC31.07■■■□□ 2.56
Uchl4P58321 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Uchl4P58321 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30.97■■■□□ 2.55
Uchl4P58321 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.94■■■□□ 2.54
Uchl4P58321 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30.92■■■□□ 2.54
Uchl4P58321 Gm27325-201ENSMUST00000175467 74 ntBASIC30.88■■■□□ 2.53
Uchl4P58321 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Uchl4P58321 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Uchl4P58321 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
Uchl4P58321 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
Uchl4P58321 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30.61■■■□□ 2.49
Uchl4P58321 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC30.56■■■□□ 2.48
Uchl4P58321 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC30.56■■■□□ 2.48
Uchl4P58321 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC30.53■■■□□ 2.48
Uchl4P58321 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Uchl4P58321 Gm10524-201ENSMUST00000181931 1893 ntBASIC30.48■■■□□ 2.47
Uchl4P58321 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
Uchl4P58321 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Uchl4P58321 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30.43■■■□□ 2.46
Uchl4P58321 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC30.42■■■□□ 2.46
Uchl4P58321 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Uchl4P58321 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Uchl4P58321 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC30.36■■■□□ 2.45
Uchl4P58321 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Uchl4P58321 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Uchl4P58321 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC30.29■■■□□ 2.44
Uchl4P58321 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Uchl4P58321 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC30.21■■■□□ 2.43
Uchl4P58321 Rab21-202ENSMUST00000218831 843 ntBASIC30.19■■■□□ 2.42
Uchl4P58321 Gm25262-201ENSMUST00000174934 133 ntBASIC30.15■■■□□ 2.42
Uchl4P58321 CT025624.2-201ENSMUST00000223609 1909 ntBASIC30.12■■■□□ 2.41
Uchl4P58321 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC30.08■■■□□ 2.41
Uchl4P58321 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Uchl4P58321 Gm42596-201ENSMUST00000196305 1958 ntBASIC30.06■■■□□ 2.4
Uchl4P58321 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30.06■■■□□ 2.4
Uchl4P58321 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Uchl4P58321 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
Uchl4P58321 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC29.91■■■□□ 2.38
Uchl4P58321 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC29.86■■■□□ 2.37
Uchl4P58321 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC29.85■■■□□ 2.37
Uchl4P58321 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC29.8■■■□□ 2.36
Uchl4P58321 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC29.78■■■□□ 2.36
Uchl4P58321 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
Uchl4P58321 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Uchl4P58321 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Uchl4P58321 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC29.73■■■□□ 2.35
Uchl4P58321 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Uchl4P58321 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Uchl4P58321 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC29.64■■■□□ 2.34
Uchl4P58321 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC29.6■■■□□ 2.33
Uchl4P58321 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC29.56■■■□□ 2.32
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms