RNA–Protein interactions for RNA: ENSMUST00000047835.7

Scaf11-201, Transcript of SR-related CTD-associated factor 11, mousemouse

TSL 5 BASIC

Gene Scaf11, Length 5,766 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11-201ENSMUST00000047835 TubP50586 505 aa18.94■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Dpysl3Q62188 570 aa18.94■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Snx5Q9D8U8 404 aa18.94■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Tns2Q8CGB6 1400 aa18.94■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Ptpn23Q6PB44 1692 aa18.93■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Patl2A2ARM1 529 aa18.93■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Trmt1lA2RSY6 728 aaKnown RBP18.93■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Scrn3Q3TMH2 418 aa18.93■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Esyt3Q5DTI8 891 aa18.93■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Sema5bQ60519 1093 aa18.93■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Tas2r109Q7M707 316 aa18.93■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Pcdhb19Q91Y01 801 aa18.93■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Lrrc71Q9D3W5 558 aa18.93■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Nfu1Q9QZ23 255 aa18.93■□□□□ 0.62
Scaf11-201ENSMUST00000047835 PdynO35417 248 aa18.93■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Bmpr2O35607 1038 aa18.93■□□□□ 0.62
Scaf11-201ENSMUST00000047835 PorP37040 678 aa18.93■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Gpatch4Q3TFK5 415 aaKnown RBP18.93■□□□□ 0.62
Scaf11-201ENSMUST00000047835 GzmnQ920S1 248 aa18.93■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Dach2Q925Q8 634 aa18.93■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Ascc1Q9D8Z1 356 aaKnown RBP18.93■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Zfp990B1AVN5 605 aa18.93■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Fdxacb1Q3UY23 622 aa18.93■□□□□ 0.62
Scaf11-201ENSMUST00000047835 CtifQ6PEE2 600 aaKnown RBP18.93■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Setdb2Q8C267 713 aa18.93■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Q8CD60 292 aa18.93■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Rnf135Q9CWS1 417 aa18.93■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Oas1fQ14AZ4 364 aa18.93■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Sco1Q5SUC9 284 aa18.93■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Orc2Q60862 576 aaKnown RBP18.93■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Ccser1Q8C0C4 895 aa18.93■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Smok2bQ9QYZ3 484 aa18.93■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Smok2aQ9QYZ6 504 aa18.93■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Mup6A2AV72 179 aa18.93■□□□□ 0.62
Scaf11-201ENSMUST00000047835 YwhaqP68254 245 aaKnown RBP18.93■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Tekt4Q149S1 447 aa18.93■□□□□ 0.62
Scaf11-201ENSMUST00000047835 GmncQ3URY2 333 aa18.93■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Srek1ip1Q4V9W2 153 aa18.93■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Kcnj11Q61743 390 aa18.93■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Stk40Q7TNL3 435 aa18.93■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Tmem82Q8R115 356 aa18.93■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Pcdhb21Q91V48 774 aa18.93■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Mrpl57Q9CQF8 102 aaKnown RBP18.93■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Ptf1aQ9QX98 324 aa18.93■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Gm6133B2RY53 190 aa18.92■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Akap10O88845 662 aa18.92■□□□□ 0.62
Scaf11-201ENSMUST00000047835 IppP28575 584 aa18.92■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Traf2P39429 501 aa18.92■□□□□ 0.62
Scaf11-201ENSMUST00000047835 PtpaP58389 323 aa18.92■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Phlda1Q62392 405 aa18.92■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Letm2Q7TNU7 480 aa18.92■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Akr1c20Q8VC77 323 aa18.92■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Kcnq4Q9JK97 696 aa18.92■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Olfr271-ps1A0A1L1SQH2 283 aa18.92■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Wnt7aP24383 349 aa18.92■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Cpne3Q8BT60 533 aa18.92■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Ppp1r3gQ9CW07 347 aa18.92■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Mapk13Q9Z1B7 366 aa18.92■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Casp4P70343 373 aa18.92■□□□□ 0.62
Scaf11-201ENSMUST00000047835 A1cfQ5YD48 595 aa18.92■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Efl1Q8C0D5 1127 aa18.92■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Krt6bQ9Z331 562 aa18.92■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Oip5A2AQ14 241 aa18.92■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Usp4P35123 962 aa18.92■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Atg16l2Q6KAU8 623 aa18.92■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Dnajc8Q6NZB0 253 aaKnown RBP18.92■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Mrpl1Q99N96 336 aaKnown RBP18.92■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Sh2d4aQ9D7V1 421 aa18.92■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Nfat5Q9WV30 1534 aa18.91■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Bpifb9bA2AJD1 591 aa18.91■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Scgb2b7D3YYY1 112 aa18.91■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Krt2Q3TTY5 707 aa18.91■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Sema3cQ62181 751 aa18.91■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Bpifb9aQ80XI7 591 aa18.91■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Nipal1Q8BMW7 416 aa18.91■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Daam1Q8BPM0 1077 aa18.91■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Unc93b1Q8VCW4 598 aa18.91■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Serbp1Q9CY58 407 aaKnown RBP18.91■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Ndufs3Q9DCT2 263 aaKnown RBP18.91■□□□□ 0.62
Scaf11-201ENSMUST00000047835 LnpkQ7TQ95 425 aa18.91■□□□□ 0.62
Scaf11-201ENSMUST00000047835 AgpsQ8C0I1 645 aa18.91■□□□□ 0.62
Scaf11-201ENSMUST00000047835 PolbQ8K409 335 aa18.91■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Prl2c5Q9JLV9 222 aa18.91■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Cldn3Q9Z0G9 219 aa18.91■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Ubr1O70481 1757 aa18.91■□□□□ 0.62
Scaf11-201ENSMUST00000047835 1700011I03RikE9PYL8 271 aa18.91■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Nek2O35942 443 aa18.91■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Serping1P97290 504 aa18.91■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Arl14Q3SXC5 192 aa18.91■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Gpd1lQ3ULJ0 351 aa18.91■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Sh2d1b2Q45HK4 132 aa18.91■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Foxo6Q70KY4 559 aa18.91■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Tas2r131Q7M708 310 aa18.91■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Eif4bQ8BGD9 611 aaKnown RBP18.91■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Klhl2Q8JZP3 593 aa18.91■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Tssc4Q9JHE7 317 aa18.91■□□□□ 0.62
Scaf11-201ENSMUST00000047835 GraspQ9JJA9 392 aa18.91■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Vangl2Q91ZD4 521 aa18.91■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Wars2Q9CYK1 360 aa18.91■□□□□ 0.62
Scaf11-201ENSMUST00000047835 B4galt5Q9JMK0 388 aa18.91■□□□□ 0.62
Retrieved 100 of 22,080 RNA–protein pairs in 45.1 ms