Protein–RNA interactions for Protein: Q3UY23

Fdxacb1, Ferredoxin-fold anticodon-binding domain-containing protein 1 homolog, mousemouse

Predictions only

Length 622 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdxacb1Q3UY23 Gm25239-201ENSMUST00000174915 86 ntBASIC42.69■■■■■ 4.42
Fdxacb1Q3UY23 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC39.34■■■■□ 3.89
Fdxacb1Q3UY23 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC38.86■■■■□ 3.81
Fdxacb1Q3UY23 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC37.69■■■■□ 3.62
Fdxacb1Q3UY23 Gm15042-201ENSMUST00000120212 883 ntBASIC37.53■■■■□ 3.6
Fdxacb1Q3UY23 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC36.98■■■■□ 3.51
Fdxacb1Q3UY23 Gm24109-201ENSMUST00000175489 103 ntBASIC36.91■■■■□ 3.5
Fdxacb1Q3UY23 Gm15045-201ENSMUST00000117359 883 ntBASIC36.77■■■■□ 3.48
Fdxacb1Q3UY23 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC36.53■■■■□ 3.44
Fdxacb1Q3UY23 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC36.3■■■■□ 3.4
Fdxacb1Q3UY23 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC36.05■■■■□ 3.36
Fdxacb1Q3UY23 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC35.74■■■■□ 3.31
Fdxacb1Q3UY23 Gm23366-201ENSMUST00000175022 89 ntBASIC35.7■■■■□ 3.31
Fdxacb1Q3UY23 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC35.51■■■■□ 3.28
Fdxacb1Q3UY23 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC35.5■■■■□ 3.27
Fdxacb1Q3UY23 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC35.19■■■■□ 3.22
Fdxacb1Q3UY23 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
Fdxacb1Q3UY23 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC34.9■■■■□ 3.18
Fdxacb1Q3UY23 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
Fdxacb1Q3UY23 Psd-208ENSMUST00000224556 2034 ntBASIC34.81■■■■□ 3.16
Fdxacb1Q3UY23 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
Fdxacb1Q3UY23 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC34.67■■■■□ 3.14
Fdxacb1Q3UY23 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC34.64■■■■□ 3.14
Fdxacb1Q3UY23 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC34.57■■■■□ 3.12
Fdxacb1Q3UY23 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
Fdxacb1Q3UY23 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC34.49■■■■□ 3.11
Fdxacb1Q3UY23 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC34.45■■■■□ 3.11
Fdxacb1Q3UY23 AC153911.1-202ENSMUST00000218534 1034 ntBASIC34.4■■■■□ 3.1
Fdxacb1Q3UY23 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC34.28■■■■□ 3.08
Fdxacb1Q3UY23 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC34.11■■■■□ 3.05
Fdxacb1Q3UY23 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC33.88■■■■□ 3.01
Fdxacb1Q3UY23 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC33.87■■■■□ 3.01
Fdxacb1Q3UY23 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC33.86■■■■□ 3.01
Fdxacb1Q3UY23 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC33.81■■■■□ 3
Fdxacb1Q3UY23 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■□□ 2.99
Fdxacb1Q3UY23 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC33.73■■■□□ 2.99
Fdxacb1Q3UY23 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
Fdxacb1Q3UY23 Gm25238-201ENSMUST00000174914 89 ntBASIC33.63■■■□□ 2.97
Fdxacb1Q3UY23 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC33.59■■■□□ 2.97
Fdxacb1Q3UY23 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC33.57■■■□□ 2.97
Fdxacb1Q3UY23 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC33.47■■■□□ 2.95
Fdxacb1Q3UY23 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC33.29■■■□□ 2.92
Fdxacb1Q3UY23 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
Fdxacb1Q3UY23 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
Fdxacb1Q3UY23 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC33.12■■■□□ 2.89
Fdxacb1Q3UY23 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC33.05■■■□□ 2.88
Fdxacb1Q3UY23 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
Fdxacb1Q3UY23 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
Fdxacb1Q3UY23 Gm27325-201ENSMUST00000175467 74 ntBASIC32.98■■■□□ 2.87
Fdxacb1Q3UY23 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC32.98■■■□□ 2.87
Fdxacb1Q3UY23 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC32.92■■■□□ 2.86
Fdxacb1Q3UY23 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
Fdxacb1Q3UY23 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
Fdxacb1Q3UY23 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC32.71■■■□□ 2.83
Fdxacb1Q3UY23 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
Fdxacb1Q3UY23 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
Fdxacb1Q3UY23 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC32.61■■■□□ 2.81
Fdxacb1Q3UY23 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
Fdxacb1Q3UY23 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC32.56■■■□□ 2.8
Fdxacb1Q3UY23 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC32.55■■■□□ 2.8
Fdxacb1Q3UY23 Gm10524-201ENSMUST00000181931 1893 ntBASIC32.48■■■□□ 2.79
Fdxacb1Q3UY23 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC32.48■■■□□ 2.79
Fdxacb1Q3UY23 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Fdxacb1Q3UY23 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Fdxacb1Q3UY23 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC32.39■■■□□ 2.78
Fdxacb1Q3UY23 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Fdxacb1Q3UY23 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC32.36■■■□□ 2.77
Fdxacb1Q3UY23 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
Fdxacb1Q3UY23 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC32.32■■■□□ 2.76
Fdxacb1Q3UY23 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
Fdxacb1Q3UY23 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
Fdxacb1Q3UY23 Rab21-202ENSMUST00000218831 843 ntBASIC32.21■■■□□ 2.75
Fdxacb1Q3UY23 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC32.19■■■□□ 2.74
Fdxacb1Q3UY23 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
Fdxacb1Q3UY23 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Fdxacb1Q3UY23 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC32.1■■■□□ 2.73
Fdxacb1Q3UY23 Gm25262-201ENSMUST00000174934 133 ntBASIC32.09■■■□□ 2.73
Fdxacb1Q3UY23 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC32.08■■■□□ 2.73
Fdxacb1Q3UY23 CT025624.2-201ENSMUST00000223609 1909 ntBASIC32.04■■■□□ 2.72
Fdxacb1Q3UY23 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Fdxacb1Q3UY23 Gm42596-201ENSMUST00000196305 1958 ntBASIC31.98■■■□□ 2.71
Fdxacb1Q3UY23 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Fdxacb1Q3UY23 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC31.9■■■□□ 2.7
Fdxacb1Q3UY23 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
Fdxacb1Q3UY23 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC31.82■■■□□ 2.68
Fdxacb1Q3UY23 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Fdxacb1Q3UY23 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
Fdxacb1Q3UY23 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC31.74■■■□□ 2.67
Fdxacb1Q3UY23 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC31.72■■■□□ 2.67
Fdxacb1Q3UY23 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
Fdxacb1Q3UY23 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Fdxacb1Q3UY23 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC31.62■■■□□ 2.65
Fdxacb1Q3UY23 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Fdxacb1Q3UY23 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Fdxacb1Q3UY23 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC31.51■■■□□ 2.63
Fdxacb1Q3UY23 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
Fdxacb1Q3UY23 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC31.47■■■□□ 2.63
Fdxacb1Q3UY23 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC31.47■■■□□ 2.63
Fdxacb1Q3UY23 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Fdxacb1Q3UY23 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms