RNA–Protein interactions for RNA: ENST00000580573.1

KPNB1-210, Transcript of karyopherin subunit beta 1, humanhuman

TSL 3

Gene KPNB1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-210ENST00000580573 RAD9AQ99638 391 aa8.34□□□□□ -1.07
KPNB1-210ENST00000580573 KRTAP3-3Q9BYR6 98 aa8.34□□□□□ -1.07
KPNB1-210ENST00000580573 KRTAP3-2Q9BYR7 98 aa8.34□□□□□ -1.07
KPNB1-210ENST00000580573 ULBP1Q9BZM6 244 aa8.34□□□□□ -1.07
KPNB1-210ENST00000580573 CRISPLD1Q9H336 500 aa8.34□□□□□ -1.07
KPNB1-210ENST00000580573 LRRC4Q9HBW1 653 aa8.34□□□□□ -1.07
KPNB1-210ENST00000580573 RXFP1Q9HBX9 757 aa8.34□□□□□ -1.07
KPNB1-210ENST00000580573 COMMD8Q9NX08 183 aa8.34□□□□□ -1.07
KPNB1-210ENST00000580573 DDX56Q9NY93 547 aaKnown RBP8.34□□□□□ -1.07
KPNB1-210ENST00000580573 SPG21Q9NZD8 308 aa8.34□□□□□ -1.07
KPNB1-210ENST00000580573 EHD2Q9NZN4 543 aa8.34□□□□□ -1.07
KPNB1-210ENST00000580573 FNIP2Q9P278 1114 aa8.34□□□□□ -1.07
KPNB1-210ENST00000580573 TSR3Q9UJK0 312 aaKnown RBP8.34□□□□□ -1.07
KPNB1-210ENST00000580573 MAFFQ9ULX9 164 aa8.34□□□□□ -1.07
KPNB1-210ENST00000580573 EFR3BQ9Y2G0 817 aa8.34□□□□□ -1.07
KPNB1-210ENST00000580573 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.34□□□□□ -1.07
KPNB1-210ENST00000580573 INSL6Q9Y581 213 aa8.34□□□□□ -1.07
KPNB1-210ENST00000580573 PCDHB5Q9Y5E4 795 aa8.34□□□□□ -1.07
KPNB1-210ENST00000580573 IRAK3Q9Y616 596 aa8.34□□□□□ -1.07
KPNB1-210ENST00000580573 HELZP42694 1942 aaKnown RBP8.34□□□□□ -1.07
KPNB1-210ENST00000580573 CHD5Q8TDI0 1954 aa8.33□□□□□ -1.08
KPNB1-210ENST00000580573 UQCRHLA0A096LP55 91 aa8.33□□□□□ -1.08
KPNB1-210ENST00000580573 WDR27A2RRH5 827 aa8.33□□□□□ -1.08
KPNB1-210ENST00000580573 YJEFN3A6XGL0 299 aa8.33□□□□□ -1.08
KPNB1-210ENST00000580573 E7ENQ6 273 aa8.33□□□□□ -1.08
KPNB1-210ENST00000580573 C5orf67F2Z3F1 127 aa8.33□□□□□ -1.08
KPNB1-210ENST00000580573 PIK3R2O00459 728 aa8.33□□□□□ -1.08
KPNB1-210ENST00000580573 MDM4O15151 490 aa8.33□□□□□ -1.08
KPNB1-210ENST00000580573 ADAM12O43184 909 aa8.33□□□□□ -1.08
KPNB1-210ENST00000580573 CEP104O60308 925 aa8.33□□□□□ -1.08
KPNB1-210ENST00000580573 RNF8O76064 485 aa8.33□□□□□ -1.08
KPNB1-210ENST00000580573 TRUB2O95900 331 aaKnown RBP8.33□□□□□ -1.08
KPNB1-210ENST00000580573 UQCRHP07919 91 aa8.33□□□□□ -1.08
KPNB1-210ENST00000580573 HAPLN1P10915 354 aaPredicted RBP8.33□□□□□ -1.08
KPNB1-210ENST00000580573 LCP1P13796 627 aa8.33□□□□□ -1.08
KPNB1-210ENST00000580573 PDGFRAP16234 1089 aa8.33□□□□□ -1.08
KPNB1-210ENST00000580573 CYP2F1P24903 491 aa8.33□□□□□ -1.08
KPNB1-210ENST00000580573 MIPP30301 263 aa8.33□□□□□ -1.08
KPNB1-210ENST00000580573 PAFAH1B1P43034 410 aa8.33□□□□□ -1.08
KPNB1-210ENST00000580573 GLUD2P49448 558 aa8.33□□□□□ -1.08
KPNB1-210ENST00000580573 SLC5A3P53794 718 aa8.33□□□□□ -1.08
KPNB1-210ENST00000580573 RAB33AQ14088 237 aa8.33□□□□□ -1.08
KPNB1-210ENST00000580573 PPP2R5EQ16537 467 aa8.33□□□□□ -1.08
KPNB1-210ENST00000580573 TPGS2Q68CL5 300 aa8.33□□□□□ -1.08
KPNB1-210ENST00000580573 TXNRD3NBQ6F5E7 133 aa8.33□□□□□ -1.08
KPNB1-210ENST00000580573 PRSS55Q6UWB4 352 aaPredicted RBP8.33□□□□□ -1.08
KPNB1-210ENST00000580573 ANKS1BQ7Z6G8 1248 aa8.33□□□□□ -1.08
KPNB1-210ENST00000580573 SLC13A5Q86YT5 568 aaPredicted RBP8.33□□□□□ -1.08
KPNB1-210ENST00000580573 PSTKQ8IV42 348 aaKnown RBP8.33□□□□□ -1.08
KPNB1-210ENST00000580573 SIX6OS1Q8N1H7 587 aa8.33□□□□□ -1.08
KPNB1-210ENST00000580573 ZNF276Q8N554 614 aa8.33□□□□□ -1.08
KPNB1-210ENST00000580573 RUBCNQ92622 972 aa8.33□□□□□ -1.08
KPNB1-210ENST00000580573 CFAP57Q96MR6 1250 aa8.33□□□□□ -1.08
KPNB1-210ENST00000580573 PEBP4Q96S96 227 aa8.33□□□□□ -1.08
KPNB1-210ENST00000580573 YME1L1Q96TA2 773 aa8.33□□□□□ -1.08
KPNB1-210ENST00000580573 CLSTN3Q9BQT9 956 aa8.33□□□□□ -1.08
KPNB1-210ENST00000580573 HERPUD2Q9BSE4 406 aa8.33□□□□□ -1.08
KPNB1-210ENST00000580573 TRIM62Q9BVG3 475 aa8.33□□□□□ -1.08
KPNB1-210ENST00000580573 TTLL2Q9BWV7 592 aa8.33□□□□□ -1.08
KPNB1-210ENST00000580573 PLVAPQ9BX97 442 aa8.33□□□□□ -1.08
KPNB1-210ENST00000580573 ZBP1Q9H171 429 aa8.33□□□□□ -1.08
KPNB1-210ENST00000580573 POPDC2Q9HBU9 364 aa8.33□□□□□ -1.08
KPNB1-210ENST00000580573 AAASQ9NRG9 546 aa8.33□□□□□ -1.08
KPNB1-210ENST00000580573 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.33□□□□□ -1.08
KPNB1-210ENST00000580573 RBM12Q9NTZ6 932 aaKnown RBP8.33□□□□□ -1.08
KPNB1-210ENST00000580573 TMEM51Q9NW97 253 aa8.33□□□□□ -1.08
KPNB1-210ENST00000580573 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.33□□□□□ -1.08
KPNB1-210ENST00000580573 RRN3Q9NYV6 651 aa8.33□□□□□ -1.08
KPNB1-210ENST00000580573 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.33□□□□□ -1.08
KPNB1-210ENST00000580573 SMARCAL1Q9NZC9 954 aa8.33□□□□□ -1.08
KPNB1-210ENST00000580573 CALCOCO1Q9P1Z2 691 aa8.33□□□□□ -1.08
KPNB1-210ENST00000580573 PCDH10Q9P2E7 1040 aa8.33□□□□□ -1.08
KPNB1-210ENST00000580573 USP18Q9UMW8 372 aa8.33□□□□□ -1.08
KPNB1-210ENST00000580573 LZTS1Q9Y250 596 aa8.33□□□□□ -1.08
KPNB1-210ENST00000580573 hCG_1818297A0A087WSY0 165 aa8.32□□□□□ -1.08
KPNB1-210ENST00000580573 TARSL2A2RTX5 802 aaKnown RBP8.32□□□□□ -1.08
KPNB1-210ENST00000580573 DYNC1I1O14576 645 aa8.32□□□□□ -1.08
KPNB1-210ENST00000580573 GRAP2O75791 330 aa8.32□□□□□ -1.08
KPNB1-210ENST00000580573 FGF18O76093 207 aa8.32□□□□□ -1.08
KPNB1-210ENST00000580573 ZRANB2O95218 330 aaKnown RBP eCLIP8.32□□□□□ -1.08
KPNB1-210ENST00000580573 C1RP00736 705 aa8.32□□□□□ -1.08
KPNB1-210ENST00000580573 FGGP02679 453 aa8.32□□□□□ -1.08
KPNB1-210ENST00000580573 LTFP02788 710 aa8.32□□□□□ -1.08
KPNB1-210ENST00000580573 ZDHHC11BP0C7U3 371 aa8.32□□□□□ -1.08
KPNB1-210ENST00000580573 CTSAP10619 480 aa8.32□□□□□ -1.08
KPNB1-210ENST00000580573 ATF2P15336 505 aa8.32□□□□□ -1.08
KPNB1-210ENST00000580573 ATF6P18850 670 aa8.32□□□□□ -1.08
KPNB1-210ENST00000580573 TFE3P19532 575 aaPredicted RBP8.32□□□□□ -1.08
KPNB1-210ENST00000580573 CDKN2BP42772 138 aa8.32□□□□□ -1.08
KPNB1-210ENST00000580573 DNA2P51530 1060 aa8.32□□□□□ -1.08
KPNB1-210ENST00000580573 AIF1P55008 147 aa8.32□□□□□ -1.08
KPNB1-210ENST00000580573 CREMQ03060 361 aa8.32□□□□□ -1.08
KPNB1-210ENST00000580573 SCAPQ12770 1279 aa8.32□□□□□ -1.08
KPNB1-210ENST00000580573 ZNF211Q13398 564 aaPredicted RBP8.32□□□□□ -1.08
KPNB1-210ENST00000580573 DPYSL2Q16555 572 aa8.32□□□□□ -1.08
KPNB1-210ENST00000580573 HADHQ16836 314 aaKnown RBP8.32□□□□□ -1.08
KPNB1-210ENST00000580573 ERCC6LQ2NKX8 1250 aa8.32□□□□□ -1.08
KPNB1-210ENST00000580573 C15orf59Q2T9L4 293 aaPredicted RBP8.32□□□□□ -1.08
KPNB1-210ENST00000580573 GLE1Q53GS7 698 aaKnown RBP8.32□□□□□ -1.08
KPNB1-210ENST00000580573 RAB6CQ53S08 254 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms