RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 STEAP1Q9UHE8 339 aa4.84□□□□□ -1.63
LINC00397-201ENST00000422074 PPEF2O14830 753 aa4.83□□□□□ -1.64
LINC00397-201ENST00000422074 GCATO75600 419 aa4.83□□□□□ -1.64
LINC00397-201ENST00000422074 ANXA2P07355 339 aaKnown RBP4.83□□□□□ -1.64
LINC00397-201ENST00000422074 COPB1P53618 953 aaKnown RBP4.83□□□□□ -1.64
LINC00397-201ENST00000422074 FHL3Q13643 280 aa4.83□□□□□ -1.64
LINC00397-201ENST00000422074 C12orf76Q8N812 135 aaPredicted RBP4.83□□□□□ -1.64
LINC00397-201ENST00000422074 PNPLA1Q8N8W4 532 aa4.83□□□□□ -1.64
LINC00397-201ENST00000422074 MAFAQ8NHW3 353 aaPredicted RBP4.83□□□□□ -1.64
LINC00397-201ENST00000422074 ZNF48Q96MX3 618 aaPredicted RBP4.83□□□□□ -1.64
LINC00397-201ENST00000422074 HIST1H2AAQ96QV6 131 aa4.83□□□□□ -1.64
LINC00397-201ENST00000422074 ZNF212Q9UDV6 495 aa4.83□□□□□ -1.64
LINC00397-201ENST00000422074 ITGB1BP2Q9UKP3 347 aa4.83□□□□□ -1.64
LINC00397-201ENST00000422074 SLC27A6Q9Y2P4 619 aa4.83□□□□□ -1.64
LINC00397-201ENST00000422074 SPATA31A1Q5TZJ5 1347 aa4.82□□□□□ -1.64
LINC00397-201ENST00000422074 KCNU1A8MYU2 1149 aa4.82□□□□□ -1.64
LINC00397-201ENST00000422074 AREL1O15033 823 aa4.82□□□□□ -1.64
LINC00397-201ENST00000422074 ATF3P18847 181 aa4.82□□□□□ -1.64
LINC00397-201ENST00000422074 ADRA1DP25100 572 aa4.82□□□□□ -1.64
LINC00397-201ENST00000422074 RBL1P28749 1068 aa4.82□□□□□ -1.64
LINC00397-201ENST00000422074 HTR7P34969 479 aa4.82□□□□□ -1.64
LINC00397-201ENST00000422074 THBS4P35443 961 aa4.82□□□□□ -1.64
LINC00397-201ENST00000422074 ITGA8P53708 1063 aa4.82□□□□□ -1.64
LINC00397-201ENST00000422074 DEUP1Q05D60 604 aa4.82□□□□□ -1.64
LINC00397-201ENST00000422074 STK3Q13188 491 aa4.82□□□□□ -1.64
LINC00397-201ENST00000422074 LAMB3Q13751 1172 aa4.82□□□□□ -1.64
LINC00397-201ENST00000422074 DAG1Q14118 895 aa4.82□□□□□ -1.64
LINC00397-201ENST00000422074 TMEM65Q6PI78 240 aa4.82□□□□□ -1.64
LINC00397-201ENST00000422074 DEF8Q6ZN54 512 aa4.82□□□□□ -1.64
LINC00397-201ENST00000422074 UBE2Q1Q7Z7E8 422 aa4.82□□□□□ -1.64
LINC00397-201ENST00000422074 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.82□□□□□ -1.64
LINC00397-201ENST00000422074 C9orf106Q8NAJ2 232 aa4.82□□□□□ -1.64
LINC00397-201ENST00000422074 NGDNQ8NEJ9 315 aaKnown RBP4.82□□□□□ -1.64
LINC00397-201ENST00000422074 MBD3L2Q8NHZ7 208 aaPredicted RBP4.82□□□□□ -1.64
LINC00397-201ENST00000422074 FCRL4Q96PJ5 515 aa4.82□□□□□ -1.64
LINC00397-201ENST00000422074 EFHD1Q9BUP0 239 aa4.82□□□□□ -1.64
LINC00397-201ENST00000422074 VPS16Q9H269 839 aa4.82□□□□□ -1.64
LINC00397-201ENST00000422074 ASAP1Q9ULH1 1129 aa4.82□□□□□ -1.64
LINC00397-201ENST00000422074 FZD4Q9ULV1 537 aa4.82□□□□□ -1.64
LINC00397-201ENST00000422074 CLCA1A8K7I4 914 aa4.81□□□□□ -1.64
LINC00397-201ENST00000422074 DSCR3O14972 297 aa4.81□□□□□ -1.64
LINC00397-201ENST00000422074 KCNQ3O43525 872 aa4.81□□□□□ -1.64
LINC00397-201ENST00000422074 SNX2O60749 519 aa4.81□□□□□ -1.64
LINC00397-201ENST00000422074 IL18RAPO95256 599 aa4.81□□□□□ -1.64
LINC00397-201ENST00000422074 ARHGAP25P42331 645 aa4.81□□□□□ -1.64
LINC00397-201ENST00000422074 MMP13P45452 471 aa4.81□□□□□ -1.64
LINC00397-201ENST00000422074 GPC5P78333 572 aa4.81□□□□□ -1.64
LINC00397-201ENST00000422074 MTAPQ13126 283 aa4.81□□□□□ -1.64
LINC00397-201ENST00000422074 KCNAB1Q14722 419 aa4.81□□□□□ -1.64
LINC00397-201ENST00000422074 EPHA10Q5JZY3 1008 aa4.81□□□□□ -1.64
LINC00397-201ENST00000422074 VSTM1Q6UX27 236 aa4.81□□□□□ -1.64
LINC00397-201ENST00000422074 RANBP10Q6VN20 620 aa4.81□□□□□ -1.64
LINC00397-201ENST00000422074 DCDC5Q6ZRR9 648 aa4.81□□□□□ -1.64
LINC00397-201ENST00000422074 RNF44Q7L0R7 432 aa4.81□□□□□ -1.64
LINC00397-201ENST00000422074 FMNL3Q8IVF7 1028 aa4.81□□□□□ -1.64
LINC00397-201ENST00000422074 C11orf44Q8N8P7 122 aa4.81□□□□□ -1.64
LINC00397-201ENST00000422074 MAP4K1Q92918 833 aa4.81□□□□□ -1.64
LINC00397-201ENST00000422074 SPRTNQ9H040 489 aaPredicted RBP4.81□□□□□ -1.64
LINC00397-201ENST00000422074 RXFP3Q9NSD7 469 aa4.81□□□□□ -1.64
LINC00397-201ENST00000422074 KLHL42Q9P2K6 505 aa4.81□□□□□ -1.64
LINC00397-201ENST00000422074 KLHL13Q9P2N7 655 aa4.81□□□□□ -1.64
LINC00397-201ENST00000422074 HPSEQ9Y251 543 aa4.81□□□□□ -1.64
LINC00397-201ENST00000422074 PCDHGB6Q9Y5F9 930 aa4.81□□□□□ -1.64
LINC00397-201ENST00000422074 ZNF521Q96K83 1311 aa4.8□□□□□ -1.64
LINC00397-201ENST00000422074 A0A087WZ62 844 aa4.8□□□□□ -1.64
LINC00397-201ENST00000422074 CBFA2T3O75081 653 aa4.8□□□□□ -1.64
LINC00397-201ENST00000422074 NTSR1P30989 418 aa4.8□□□□□ -1.64
LINC00397-201ENST00000422074 PIK3CBP42338 1070 aa4.8□□□□□ -1.64
LINC00397-201ENST00000422074 NR4A2P43354 598 aa4.8□□□□□ -1.64
LINC00397-201ENST00000422074 EIF4A1P60842 406 aaKnown RBP4.8□□□□□ -1.64
LINC00397-201ENST00000422074 CFHR1Q03591 330 aa4.8□□□□□ -1.64
LINC00397-201ENST00000422074 SRSF1Q07955 248 aaKnown RBP eCLIP4.8□□□□□ -1.64
LINC00397-201ENST00000422074 DNASE1L3Q13609 305 aa4.8□□□□□ -1.64
LINC00397-201ENST00000422074 ZNF268Q14587 947 aaPredicted RBP4.8□□□□□ -1.64
LINC00397-201ENST00000422074 ACOX1Q15067 660 aa4.8□□□□□ -1.64
LINC00397-201ENST00000422074 SEC23BQ15437 767 aa4.8□□□□□ -1.64
LINC00397-201ENST00000422074 TWIST1Q15672 202 aa4.8□□□□□ -1.64
LINC00397-201ENST00000422074 Q4G0T1 1027 aa4.8□□□□□ -1.64
LINC00397-201ENST00000422074 TMTC4Q5T4D3 741 aa4.8□□□□□ -1.64
LINC00397-201ENST00000422074 PPP4R4Q6NUP7 873 aa4.8□□□□□ -1.64
LINC00397-201ENST00000422074 RNF152Q8N8N0 203 aa4.8□□□□□ -1.64
LINC00397-201ENST00000422074 ATP11CQ8NB49 1132 aa4.8□□□□□ -1.64
LINC00397-201ENST00000422074 C16orf52Q8NHV5 167 aa4.8□□□□□ -1.64
LINC00397-201ENST00000422074 SUN3Q8TAQ9 357 aa4.8□□□□□ -1.64
LINC00397-201ENST00000422074 HIC2Q96JB3 615 aa4.8□□□□□ -1.64
LINC00397-201ENST00000422074 VPS50Q96JG6 964 aa4.8□□□□□ -1.64
LINC00397-201ENST00000422074 COLEC11Q9BWP8 271 aa4.8□□□□□ -1.64
LINC00397-201ENST00000422074 MAFFQ9ULX9 164 aa4.8□□□□□ -1.64
LINC00397-201ENST00000422074 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.79□□□□□ -1.64
LINC00397-201ENST00000422074 CLIC1O00299 241 aa4.79□□□□□ -1.64
LINC00397-201ENST00000422074 THAP12O43422 761 aa4.79□□□□□ -1.64
LINC00397-201ENST00000422074 KCNAB3O43448 404 aa4.79□□□□□ -1.64
LINC00397-201ENST00000422074 CNOT3O75175 753 aaKnown RBP4.79□□□□□ -1.64
LINC00397-201ENST00000422074 FGBP02675 491 aa4.79□□□□□ -1.64
LINC00397-201ENST00000422074 GHRHRQ02643 423 aa4.79□□□□□ -1.64
LINC00397-201ENST00000422074 ZNF543Q08ER8 600 aa4.79□□□□□ -1.64
LINC00397-201ENST00000422074 MAPK7Q13164 816 aa4.79□□□□□ -1.64
LINC00397-201ENST00000422074 KCNB1Q14721 858 aa4.79□□□□□ -1.64
LINC00397-201ENST00000422074 AWAT1Q58HT5 328 aa4.79□□□□□ -1.64
LINC00397-201ENST00000422074 C10orf25Q5T742 122 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms