RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 DIABLOQ9NR28 239 aa12.68□□□□□ -0.38
NPLOC4-202ENST00000374747 PAPOLBQ9NRJ5 636 aaKnown RBP12.68□□□□□ -0.38
NPLOC4-202ENST00000374747 TAGLN3Q9UI15 199 aa12.68□□□□□ -0.38
NPLOC4-202ENST00000374747 CYP3A7-CYP3A51PA0A087WV96 503 aa12.67□□□□□ -0.38
NPLOC4-202ENST00000374747 A0A087X0T9 212 aa12.67□□□□□ -0.38
NPLOC4-202ENST00000374747 NPTXRO95502 500 aa12.67□□□□□ -0.38
NPLOC4-202ENST00000374747 FAM228BP0C875 321 aa12.67□□□□□ -0.38
NPLOC4-202ENST00000374747 PYGMP11217 842 aa12.67□□□□□ -0.38
NPLOC4-202ENST00000374747 CYP3A7P24462 503 aa12.67□□□□□ -0.38
NPLOC4-202ENST00000374747 PTPN4P29074 926 aa12.67□□□□□ -0.38
NPLOC4-202ENST00000374747 IZUMO2Q6UXV1 221 aa12.67□□□□□ -0.38
NPLOC4-202ENST00000374747 CBWD2Q8IUF1 395 aa12.67□□□□□ -0.38
NPLOC4-202ENST00000374747 RRAGCQ9HB90 399 aa12.67□□□□□ -0.38
NPLOC4-202ENST00000374747 DYRK4Q9NR20 520 aa12.67□□□□□ -0.38
NPLOC4-202ENST00000374747 H3BQF6 201 aa12.67□□□□□ -0.38
NPLOC4-202ENST00000374747 RGS5O15539 181 aa12.67□□□□□ -0.38
NPLOC4-202ENST00000374747 PLA2G6O60733 806 aa12.67□□□□□ -0.38
NPLOC4-202ENST00000374747 PTPN7P35236 360 aa12.67□□□□□ -0.38
NPLOC4-202ENST00000374747 SERPINB5P36952 375 aa12.67□□□□□ -0.38
NPLOC4-202ENST00000374747 CLCN3P51790 818 aa12.67□□□□□ -0.38
NPLOC4-202ENST00000374747 TJP1Q07157 1748 aa12.67□□□□□ -0.38
NPLOC4-202ENST00000374747 PTRHD1Q6GMV3 140 aaKnown RBP12.67□□□□□ -0.38
NPLOC4-202ENST00000374747 LINC00523Q86TU6 105 aa12.67□□□□□ -0.38
NPLOC4-202ENST00000374747 ACTRT1Q8TDG2 376 aa12.67□□□□□ -0.38
NPLOC4-202ENST00000374747 CAVIN3Q969G5 261 aa12.67□□□□□ -0.38
NPLOC4-202ENST00000374747 MTERF3Q96E29 417 aa12.67□□□□□ -0.38
NPLOC4-202ENST00000374747 CBWD1Q9BRT8 395 aa12.67□□□□□ -0.38
NPLOC4-202ENST00000374747 CATSPERBQ9H7T0 1116 aa12.67□□□□□ -0.38
NPLOC4-202ENST00000374747 RXFP1Q9HBX9 757 aa12.67□□□□□ -0.38
NPLOC4-202ENST00000374747 METTL5Q9NRN9 209 aaKnown RBP12.67□□□□□ -0.38
NPLOC4-202ENST00000374747 CPA4Q9UI42 421 aa12.67□□□□□ -0.38
NPLOC4-202ENST00000374747 CAPN6Q9Y6Q1 641 aa12.67□□□□□ -0.38
NPLOC4-202ENST00000374747 ZNF839A8K0R7 811 aa12.67□□□□□ -0.38
NPLOC4-202ENST00000374747 KPNA6O60684 536 aa12.67□□□□□ -0.38
NPLOC4-202ENST00000374747 UBOX5O94941 541 aa12.67□□□□□ -0.38
NPLOC4-202ENST00000374747 POU4F1Q01851 419 aa12.67□□□□□ -0.38
NPLOC4-202ENST00000374747 GLB1LQ6UWU2 654 aa12.67□□□□□ -0.38
NPLOC4-202ENST00000374747 RINLQ6ZS11 566 aa12.67□□□□□ -0.38
NPLOC4-202ENST00000374747 RIOX2Q8IUF8 465 aa12.67□□□□□ -0.38
NPLOC4-202ENST00000374747 SLC25A41Q8N5S1 370 aa12.67□□□□□ -0.38
NPLOC4-202ENST00000374747 KIAA0895Q8NCT3 520 aa12.67□□□□□ -0.38
NPLOC4-202ENST00000374747 SPIRE2Q8WWL2 714 aa12.67□□□□□ -0.38
NPLOC4-202ENST00000374747 HPDLQ96IR7 371 aa12.67□□□□□ -0.38
NPLOC4-202ENST00000374747 EPS8L2Q9H6S3 715 aa12.67□□□□□ -0.38
NPLOC4-202ENST00000374747 KCNMB3Q9NPA1 279 aa12.67□□□□□ -0.38
NPLOC4-202ENST00000374747 UBQLN1Q9UMX0 589 aaKnown RBP12.67□□□□□ -0.38
NPLOC4-202ENST00000374747 PCDHB8Q9UN66 801 aa12.67□□□□□ -0.38
NPLOC4-202ENST00000374747 FRMPD4Q14CM0 1322 aa12.67□□□□□ -0.38
NPLOC4-202ENST00000374747 ZC3H4Q9UPT8 1303 aaKnown RBP12.67□□□□□ -0.38
NPLOC4-202ENST00000374747 SASH3O75995 380 aa12.67□□□□□ -0.38
NPLOC4-202ENST00000374747 PPP3CCP48454 512 aa12.67□□□□□ -0.38
NPLOC4-202ENST00000374747 GTF2H3Q13889 308 aa12.67□□□□□ -0.38
NPLOC4-202ENST00000374747 DENND1BQ6P3S1 775 aa12.67□□□□□ -0.38
NPLOC4-202ENST00000374747 GJB7Q6PEY0 223 aa12.67□□□□□ -0.38
NPLOC4-202ENST00000374747 CCNJLQ8IV13 435 aa12.67□□□□□ -0.38
NPLOC4-202ENST00000374747 ZNF384Q8TF68 577 aa12.67□□□□□ -0.38
NPLOC4-202ENST00000374747 BLOC1S4Q9NUP1 217 aa12.67□□□□□ -0.38
NPLOC4-202ENST00000374747 SOAT2O75908 522 aa12.66□□□□□ -0.38
NPLOC4-202ENST00000374747 TFE3P19532 575 aaPredicted RBP12.66□□□□□ -0.38
NPLOC4-202ENST00000374747 CASP4P49662 377 aa12.66□□□□□ -0.38
NPLOC4-202ENST00000374747 CUL2Q13617 745 aa12.66□□□□□ -0.38
NPLOC4-202ENST00000374747 BOLA3Q53S33 107 aa12.66□□□□□ -0.38
NPLOC4-202ENST00000374747 FBXO36Q8NEA4 188 aa12.66□□□□□ -0.38
NPLOC4-202ENST00000374747 GLMNQ92990 594 aa12.66□□□□□ -0.38
NPLOC4-202ENST00000374747 THUMPD3Q9BV44 507 aaKnown RBP12.66□□□□□ -0.38
NPLOC4-202ENST00000374747 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.66□□□□□ -0.38
NPLOC4-202ENST00000374747 MYPNQ86TC9 1320 aa12.66□□□□□ -0.38
NPLOC4-202ENST00000374747 MEIS2O14770 477 aa12.66□□□□□ -0.38
NPLOC4-202ENST00000374747 AGAP9Q5VTM2 703 aa12.66□□□□□ -0.38
NPLOC4-202ENST00000374747 APTXQ7Z2E3 356 aaKnown RBP12.66□□□□□ -0.38
NPLOC4-202ENST00000374747 SH3RF1Q7Z6J0 888 aa12.66□□□□□ -0.38
NPLOC4-202ENST00000374747 TFB1MQ8WVM0 346 aaKnown RBP12.66□□□□□ -0.38
NPLOC4-202ENST00000374747 NMD3Q96D46 503 aaKnown RBP12.66□□□□□ -0.38
NPLOC4-202ENST00000374747 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.66□□□□□ -0.38
NPLOC4-202ENST00000374747 SNUPNO95149 360 aaKnown RBP12.66□□□□□ -0.38
NPLOC4-202ENST00000374747 GUCA1CO95843 209 aa12.66□□□□□ -0.38
NPLOC4-202ENST00000374747 SERPIND1P05546 499 aa12.66□□□□□ -0.38
NPLOC4-202ENST00000374747 CHRNB3Q05901 458 aa12.66□□□□□ -0.38
NPLOC4-202ENST00000374747 TRMT5Q32P41 509 aaKnown RBP12.66□□□□□ -0.38
NPLOC4-202ENST00000374747 EFHC1Q5JVL4 640 aa12.66□□□□□ -0.38
NPLOC4-202ENST00000374747 MTDHQ86UE4 582 aaKnown RBP12.66□□□□□ -0.38
NPLOC4-202ENST00000374747 CCDC126Q96EE4 140 aa12.66□□□□□ -0.38
NPLOC4-202ENST00000374747 PI4K2AQ9BTU6 479 aa12.66□□□□□ -0.38
NPLOC4-202ENST00000374747 CDC42EP4Q9H3Q1 356 aaKnown RBP12.66□□□□□ -0.38
NPLOC4-202ENST00000374747 CHORDC1Q9UHD1 332 aaPredicted RBP12.66□□□□□ -0.38
NPLOC4-202ENST00000374747 SESN1Q9Y6P5 492 aa12.66□□□□□ -0.38
NPLOC4-202ENST00000374747 ATP9AO75110 1047 aa12.66□□□□□ -0.38
NPLOC4-202ENST00000374747 SKAP2O75563 359 aaPredicted RBP12.66□□□□□ -0.38
NPLOC4-202ENST00000374747 TCF3P15923 654 aa12.66□□□□□ -0.38
NPLOC4-202ENST00000374747 PCSK1P29120 753 aa12.66□□□□□ -0.38
NPLOC4-202ENST00000374747 SERPINB8P50452 374 aa12.66□□□□□ -0.38
NPLOC4-202ENST00000374747 PEX5P50542 639 aa12.66□□□□□ -0.38
NPLOC4-202ENST00000374747 SGF29Q96ES7 293 aa12.66□□□□□ -0.38
NPLOC4-202ENST00000374747 MAML3Q96JK9 1138 aa12.66□□□□□ -0.38
NPLOC4-202ENST00000374747 TMEM120AQ9BXJ8 343 aa12.66□□□□□ -0.38
NPLOC4-202ENST00000374747 AKAP3O75969 853 aa12.66□□□□□ -0.38
NPLOC4-202ENST00000374747 RHOBTB1O94844 696 aa12.66□□□□□ -0.38
NPLOC4-202ENST00000374747 ERVK-9P63128 1117 aa12.66□□□□□ -0.38
NPLOC4-202ENST00000374747 RASA2Q15283 850 aa12.66□□□□□ -0.38
NPLOC4-202ENST00000374747 TRIP4Q15650 581 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms