RNA–Protein interactions for RNA: ENST00000304621.10

TTC39C-201, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TTC39C, Length 2,304 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-201ENST00000304621 RAB21Q9UL25 225 aa6.04□□□□□ -1.44
TTC39C-201ENST00000304621 CDY1Q9Y6F8 540 aa6.04□□□□□ -1.44
TTC39C-201ENST00000304621 USP3Q9Y6I4 520 aa6.04□□□□□ -1.44
TTC39C-201ENST00000304621 KIAA0100Q14667 2235 aaKnown RBP6.04□□□□□ -1.44
TTC39C-201ENST00000304621 PLXNA3P51805 1871 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 MYO16Q9Y6X6 1858 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 SYNJ2BP-COX16A0A087WUM0 186 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 ARHGEF37A1IGU5 675 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 OR6C75A6NL08 312 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 TTI1O43156 1089 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 SART1O43290 800 aaKnown RBP6.03□□□□□ -1.44
TTC39C-201ENST00000304621 HSF2BPO75031 334 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 PHF2O75151 1096 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 RNF8O76064 485 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 ENDOD1O94919 500 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 FGBP02675 491 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 LTFP02788 710 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 CPB1P15086 417 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 KDELR1P24390 212 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 IL4RP24394 825 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 SDC4P31431 198 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 PCK1P35558 622 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 SLC8A3P57103 927 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 GPR17Q13304 367 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 PPIGQ13427 754 aaKnown RBP eCLIP6.03□□□□□ -1.44
TTC39C-201ENST00000304621 SNX1Q13596 522 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 MTMR3Q13615 1198 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 ACAP1Q15027 740 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 MAPRE1Q15691 268 aaKnown RBP6.03□□□□□ -1.44
TTC39C-201ENST00000304621 TAZQ16635 292 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 CYP1B1Q16678 543 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 FAM182AQ5T1J6 154 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 C8orf74Q6P047 294 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 SCYL2Q6P3W7 929 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 C4orf50Q6ZRC1 276 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 POLNQ7Z5Q5 900 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 RCOR2Q8IZ40 523 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 DCP1BQ8IZD4 617 aaKnown RBP6.03□□□□□ -1.44
TTC39C-201ENST00000304621 PYROXD2Q8N2H3 581 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 CMASQ8NFW8 434 aaPredicted RBP6.03□□□□□ -1.44
TTC39C-201ENST00000304621 CASKIN2Q8WXE0 1202 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 HAUS1Q96CS2 278 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 ZNF558Q96NG5 402 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 OSBPL8Q9BZF1 889 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 DCLK3Q9C098 648 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 NMUR1Q9HB89 426 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 CNGB3Q9NQW8 809 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 PIGVQ9NUD9 493 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.03□□□□□ -1.44
TTC39C-201ENST00000304621 ZNF446Q9NWS9 450 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 MTMR10Q9NXD2 777 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 COX16Q9P0S2 106 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 SAE1Q9UBE0 346 aaPredicted RBP6.03□□□□□ -1.44
TTC39C-201ENST00000304621 LCMT1Q9UIC8 334 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.03□□□□□ -1.44
TTC39C-201ENST00000304621 PCDHB5Q9Y5E4 795 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 CCDC188H7C350 402 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 RRP9O43818 475 aaKnown RBP6.03□□□□□ -1.44
TTC39C-201ENST00000304621 FBXO21O94952 628 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 HEXIM1O94992 359 aaKnown RBP6.03□□□□□ -1.44
TTC39C-201ENST00000304621 GJB5O95377 273 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 SEC24AO95486 1093 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 CAPN2P17655 700 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 ATF6P18850 670 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 OR1D2P34982 312 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 NOS2P35228 1153 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 SNX16P57768 344 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 HTRA4P83105 476 aaPredicted RBP6.03□□□□□ -1.44
TTC39C-201ENST00000304621 ROR1Q01973 937 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 ELAVL2Q12926 359 aaKnown RBP6.03□□□□□ -1.44
TTC39C-201ENST00000304621 DUSP4Q13115 394 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 DPYSL3Q14195 570 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 SMC1AQ14683 1233 aaKnown RBP6.03□□□□□ -1.44
TTC39C-201ENST00000304621 PSMD5Q16401 504 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 SLC25A52Q3SY17 297 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 ZFYVE27Q5T4F4 411 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 BSPRYQ5W0U4 402 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 NPNTQ6UXI9 565 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 B4GALNT4Q76KP1 1039 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 PRUNE1Q86TP1 453 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 FAM131BQ86XD5 332 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 DDX42Q86XP3 938 aaKnown RBP eCLIP6.03□□□□□ -1.44
TTC39C-201ENST00000304621 C12orf50Q8NA57 414 aaPredicted RBP6.03□□□□□ -1.44
TTC39C-201ENST00000304621 PIK3R5Q8WYR1 880 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 MAGOHBQ96A72 148 aaKnown RBP6.03□□□□□ -1.44
TTC39C-201ENST00000304621 C8orf48Q96LL4 319 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 KCTD15Q96SI1 283 aaPredicted RBP6.03□□□□□ -1.44
TTC39C-201ENST00000304621 YME1L1Q96TA2 773 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 HERC2P3Q9BVR0 1158 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 POPDC2Q9HBU9 364 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 PCDH18Q9HCL0 1135 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 WDR6Q9NNW5 1121 aaKnown RBP6.03□□□□□ -1.44
TTC39C-201ENST00000304621 DDX56Q9NY93 547 aaKnown RBP6.03□□□□□ -1.44
TTC39C-201ENST00000304621 SPG21Q9NZD8 308 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 NUDT5Q9UKK9 219 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 MFHAS1Q9Y4C4 1052 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 SNX10Q9Y5X0 201 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 PLXNA4Q9HCM2 1894 aa6.03□□□□□ -1.44
TTC39C-201ENST00000304621 A0A1W2PQH9 124 aa6.02□□□□□ -1.45
TTC39C-201ENST00000304621 TARSL2A2RTX5 802 aaKnown RBP6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms