RNA–Protein interactions for RNA: ENST00000566095.6

SF3B3-207, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-207ENST00000566095 EFR3BQ9Y2G0 817 aa10.3□□□□□ -0.76
SF3B3-207ENST00000566095 PCDHA3Q9Y5H8 950 aa10.3□□□□□ -0.76
SF3B3-207ENST00000566095 ALG6Q9Y672 507 aa10.3□□□□□ -0.76
SF3B3-207ENST00000566095 PTPRSQ13332 1948 aa10.3□□□□□ -0.76
SF3B3-207ENST00000566095 MYH10P35580 1976 aa10.29□□□□□ -0.76
SF3B3-207ENST00000566095 WDR27A2RRH5 827 aa10.29□□□□□ -0.76
SF3B3-207ENST00000566095 LCHNA4D1U4 455 aa10.29□□□□□ -0.76
SF3B3-207ENST00000566095 TMEM191CA6NGB0 347 aa10.29□□□□□ -0.76
SF3B3-207ENST00000566095 PSTPIP1O43586 416 aa10.29□□□□□ -0.76
SF3B3-207ENST00000566095 DAB1O75553 588 aa10.29□□□□□ -0.76
SF3B3-207ENST00000566095 PROSCO94903 275 aa10.29□□□□□ -0.76
SF3B3-207ENST00000566095 KRT7P08729 469 aa10.29□□□□□ -0.76
SF3B3-207ENST00000566095 LINC00271P0C7V0 271 aa10.29□□□□□ -0.76
SF3B3-207ENST00000566095 PDGFRAP16234 1089 aa10.29□□□□□ -0.76
SF3B3-207ENST00000566095 IGFBP6P24592 240 aaPredicted RBP10.29□□□□□ -0.76
SF3B3-207ENST00000566095 CYP2F1P24903 491 aa10.29□□□□□ -0.76
SF3B3-207ENST00000566095 PSMA2P25787 234 aa10.29□□□□□ -0.76
SF3B3-207ENST00000566095 YWHAQP27348 245 aa10.29□□□□□ -0.76
SF3B3-207ENST00000566095 CTNNA1P35221 906 aaKnown RBP10.29□□□□□ -0.76
SF3B3-207ENST00000566095 KPNA1P52294 538 aaPredicted RBP10.29□□□□□ -0.76
SF3B3-207ENST00000566095 ZNF143P52747 638 aaPredicted RBP10.29□□□□□ -0.76
SF3B3-207ENST00000566095 COPS2P61201 443 aa10.29□□□□□ -0.76
SF3B3-207ENST00000566095 YWHAZP63104 245 aaKnown RBP10.29□□□□□ -0.76
SF3B3-207ENST00000566095 MESDQ14696 234 aa10.29□□□□□ -0.76
SF3B3-207ENST00000566095 ACBD5Q5T8D3 534 aaPredicted RBP10.29□□□□□ -0.76
SF3B3-207ENST00000566095 CCDC181Q5TID7 509 aa10.29□□□□□ -0.76
SF3B3-207ENST00000566095 PLPP4Q5VZY2 271 aa10.29□□□□□ -0.76
SF3B3-207ENST00000566095 BTBD8Q5XKL5 378 aa10.29□□□□□ -0.76
SF3B3-207ENST00000566095 OLFML1Q6UWY5 402 aa10.29□□□□□ -0.76
SF3B3-207ENST00000566095 FAM183BPQ6ZVS7 135 aa10.29□□□□□ -0.76
SF3B3-207ENST00000566095 POLNQ7Z5Q5 900 aa10.29□□□□□ -0.76
SF3B3-207ENST00000566095 MON1AQ86VX9 555 aa10.29□□□□□ -0.76
SF3B3-207ENST00000566095 ATAD1Q8NBU5 361 aa10.29□□□□□ -0.76
SF3B3-207ENST00000566095 LEMD2Q8NC56 503 aa10.29□□□□□ -0.76
SF3B3-207ENST00000566095 RNF139Q8WU17 664 aa10.29□□□□□ -0.76
SF3B3-207ENST00000566095 FBXO32Q969P5 355 aa10.29□□□□□ -0.76
SF3B3-207ENST00000566095 TIFAQ96CG3 184 aa10.29□□□□□ -0.76
SF3B3-207ENST00000566095 ARHGEF26Q96DR7 871 aa10.29□□□□□ -0.76
SF3B3-207ENST00000566095 TMEM209Q96SK2 561 aa10.29□□□□□ -0.76
SF3B3-207ENST00000566095 CLSTN3Q9BQT9 956 aa10.29□□□□□ -0.76
SF3B3-207ENST00000566095 CNPY3Q9BT09 278 aa10.29□□□□□ -0.76
SF3B3-207ENST00000566095 CARD6Q9BX69 1037 aa10.29□□□□□ -0.76
SF3B3-207ENST00000566095 VN1R3Q9BXE9 311 aa10.29□□□□□ -0.76
SF3B3-207ENST00000566095 PBX4Q9BYU1 374 aa10.29□□□□□ -0.76
SF3B3-207ENST00000566095 FAM129AQ9BZQ8 928 aa10.29□□□□□ -0.76
SF3B3-207ENST00000566095 PRDM16Q9HAZ2 1276 aa10.29□□□□□ -0.76
SF3B3-207ENST00000566095 HOMER3Q9NSC5 361 aa10.29□□□□□ -0.76
SF3B3-207ENST00000566095 ABCC13Q9NSE7 274 aa10.29□□□□□ -0.76
SF3B3-207ENST00000566095 TMLHEQ9NVH6 421 aa10.29□□□□□ -0.76
SF3B3-207ENST00000566095 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.29□□□□□ -0.76
SF3B3-207ENST00000566095 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.29□□□□□ -0.766e-12■□□□□ 8.9
SF3B3-207ENST00000566095 CYTH4Q9UIA0 394 aa10.29□□□□□ -0.76
SF3B3-207ENST00000566095 RAB21Q9UL25 225 aa10.29□□□□□ -0.76
SF3B3-207ENST00000566095 SCML2Q9UQR0 700 aa10.29□□□□□ -0.76
SF3B3-207ENST00000566095 NLRC5Q86WI3 1866 aa10.29□□□□□ -0.76
SF3B3-207ENST00000566095 VWA8A3KMH1 1905 aa10.29□□□□□ -0.76
SF3B3-207ENST00000566095 KIAA1671Q9BY89 1806 aa10.28□□□□□ -0.76
SF3B3-207ENST00000566095 CCDC151A5D8V7 595 aa10.28□□□□□ -0.76
SF3B3-207ENST00000566095 C2orf71A6NGG8 1288 aa10.28□□□□□ -0.76
SF3B3-207ENST00000566095 PGRMC1O00264 195 aaKnown RBP10.28□□□□□ -0.76
SF3B3-207ENST00000566095 DPYSL4O14531 572 aa10.28□□□□□ -0.76
SF3B3-207ENST00000566095 FSCN2O14926 492 aa10.28□□□□□ -0.76
SF3B3-207ENST00000566095 TEX28O15482 410 aa10.28□□□□□ -0.76
SF3B3-207ENST00000566095 PAPSS1O43252 624 aaPredicted RBP10.28□□□□□ -0.76
SF3B3-207ENST00000566095 ATMINO43313 823 aaPredicted RBP10.28□□□□□ -0.76
SF3B3-207ENST00000566095 LILRB3O75022 631 aa10.28□□□□□ -0.76
SF3B3-207ENST00000566095 XYLBO75191 536 aa10.28□□□□□ -0.76
SF3B3-207ENST00000566095 LTFP02788 710 aa10.28□□□□□ -0.76
SF3B3-207ENST00000566095 CNPP09543 421 aaKnown RBP10.28□□□□□ -0.76
SF3B3-207ENST00000566095 HNRNPA1P09651 372 aaKnown RBP eCLIP10.28□□□□□ -0.76
SF3B3-207ENST00000566095 HOXA9P31269 272 aa10.28□□□□□ -0.76
SF3B3-207ENST00000566095 NOS2P35228 1153 aa10.28□□□□□ -0.76
SF3B3-207ENST00000566095 PCK1P35558 622 aa10.28□□□□□ -0.76
SF3B3-207ENST00000566095 MATKP42679 507 aa10.28□□□□□ -0.76
SF3B3-207ENST00000566095 SSR1P43307 286 aaKnown RBP10.28□□□□□ -0.76
SF3B3-207ENST00000566095 PTPN9P43378 593 aa10.28□□□□□ -0.76
SF3B3-207ENST00000566095 AIF1P55008 147 aa10.28□□□□□ -0.76
SF3B3-207ENST00000566095 DAOAP59103 153 aa10.28□□□□□ -0.76
SF3B3-207ENST00000566095 DUSP4Q13115 394 aa10.28□□□□□ -0.76
SF3B3-207ENST00000566095 BRD3Q15059 726 aa10.28□□□□□ -0.76
SF3B3-207ENST00000566095 PPP1R15BQ5SWA1 713 aa10.28□□□□□ -0.76
SF3B3-207ENST00000566095 PM20D1Q6GTS8 502 aa10.28□□□□□ -0.76
SF3B3-207ENST00000566095 STRADAQ7RTN6 431 aa10.28□□□□□ -0.76
SF3B3-207ENST00000566095 SCUBE3Q8IX30 993 aa10.28□□□□□ -0.76
SF3B3-207ENST00000566095 RHOT1Q8IXI2 618 aa10.28□□□□□ -0.76
SF3B3-207ENST00000566095 SPATA4Q8NEY3 305 aa10.28□□□□□ -0.76
SF3B3-207ENST00000566095 ZMIZ2Q8NF64 920 aa10.28□□□□□ -0.76
SF3B3-207ENST00000566095 KLHL5Q96PQ7 755 aa10.28□□□□□ -0.76
SF3B3-207ENST00000566095 KCNK16Q96T55 309 aa10.28□□□□□ -0.76
SF3B3-207ENST00000566095 C17orf80Q9BSJ5 609 aa10.28□□□□□ -0.76
SF3B3-207ENST00000566095 ULBP1Q9BZM6 244 aa10.28□□□□□ -0.76
SF3B3-207ENST00000566095 NKX2-4Q9H2Z4 354 aa10.28□□□□□ -0.76
SF3B3-207ENST00000566095 SLITRK6Q9H5Y7 841 aa10.28□□□□□ -0.76
SF3B3-207ENST00000566095 ALG13Q9NP73 1137 aaKnown RBP10.28□□□□□ -0.76
SF3B3-207ENST00000566095 OSGEPQ9NPF4 335 aa10.28□□□□□ -0.76
SF3B3-207ENST00000566095 DDX56Q9NY93 547 aaKnown RBP10.28□□□□□ -0.76
SF3B3-207ENST00000566095 ZMYM5Q9UJ78 669 aa10.28□□□□□ -0.76
SF3B3-207ENST00000566095 FBXW11Q9UKB1 542 aa10.28□□□□□ -0.76
SF3B3-207ENST00000566095 YIPF1Q9Y548 306 aa10.28□□□□□ -0.76
SF3B3-207ENST00000566095 USP3Q9Y6I4 520 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms