RNA–Protein interactions for RNA: ENST00000525155.5

CHKA-203, Transcript of choline kinase alpha, humanhuman

TSL 5

Gene CHKA, Length 1,201 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-203ENST00000525155 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.91□□□□□ -0.34
CHKA-203ENST00000525155 GDF9O60383 454 aa12.9□□□□□ -0.34
CHKA-203ENST00000525155 RETP07949 1114 aa12.9□□□□□ -0.34
CHKA-203ENST00000525155 ATP1A3P13637 1013 aa12.9□□□□□ -0.34
CHKA-203ENST00000525155 CD58P19256 250 aa12.9□□□□□ -0.34
CHKA-203ENST00000525155 GJA4P35212 333 aa12.9□□□□□ -0.34
CHKA-203ENST00000525155 RAP1GAPP47736 663 aa12.9□□□□□ -0.34
CHKA-203ENST00000525155 NDST1P52848 882 aa12.9□□□□□ -0.34
CHKA-203ENST00000525155 RPL10AP62906 217 aaKnown RBP12.9□□□□□ -0.34
CHKA-203ENST00000525155 SIM2Q14190 667 aaPredicted RBP12.9□□□□□ -0.34
CHKA-203ENST00000525155 LRRC32Q14392 662 aa12.9□□□□□ -0.34
CHKA-203ENST00000525155 ZNF268Q14587 947 aaPredicted RBP12.9□□□□□ -0.34
CHKA-203ENST00000525155 ZNF77Q15935 545 aa12.9□□□□□ -0.34
CHKA-203ENST00000525155 TAF12Q16514 161 aa12.9□□□□□ -0.34
CHKA-203ENST00000525155 VSTM1Q6UX27 236 aa12.9□□□□□ -0.34
CHKA-203ENST00000525155 SYNPOQ8N3V7 929 aa12.9□□□□□ -0.34
CHKA-203ENST00000525155 ARL14EPQ8N8R7 260 aaPredicted RBP12.9□□□□□ -0.34
CHKA-203ENST00000525155 ELMO3Q96BJ8 720 aa12.9□□□□□ -0.34
CHKA-203ENST00000525155 TMEM176AQ96HP8 235 aa12.9□□□□□ -0.34
CHKA-203ENST00000525155 UBE2TQ9NPD8 197 aaPredicted RBP12.9□□□□□ -0.34
CHKA-203ENST00000525155 SOBPA7XYQ1 873 aa12.89□□□□□ -0.35
CHKA-203ENST00000525155 CBFA2T2O43439 604 aa12.89□□□□□ -0.35
CHKA-203ENST00000525155 PAEPP09466 180 aa12.89□□□□□ -0.35
CHKA-203ENST00000525155 CHRM1P11229 460 aaPredicted RBP12.89□□□□□ -0.35
CHKA-203ENST00000525155 SLC9A1P19634 815 aa12.89□□□□□ -0.35
CHKA-203ENST00000525155 BDNFP23560 247 aa12.89□□□□□ -0.35
CHKA-203ENST00000525155 DDX6P26196 483 aaKnown RBP eCLIP12.89□□□□□ -0.35
CHKA-203ENST00000525155 AVPR1AP37288 418 aa12.89□□□□□ -0.35
CHKA-203ENST00000525155 MAGEA11P43364 429 aa12.89□□□□□ -0.35
CHKA-203ENST00000525155 MESP2Q0VG99 397 aa12.89□□□□□ -0.35
CHKA-203ENST00000525155 EML3Q32P44 896 aa12.89□□□□□ -0.35
CHKA-203ENST00000525155 LAIR1Q6GTX8 287 aa12.89□□□□□ -0.35
CHKA-203ENST00000525155 C1orf228Q6PIY5 440 aa12.89□□□□□ -0.35
CHKA-203ENST00000525155 PRR23BQ6ZRT6 265 aa12.89□□□□□ -0.35
CHKA-203ENST00000525155 WDR5BQ86VZ2 330 aa12.89□□□□□ -0.35
CHKA-203ENST00000525155 FMNL3Q8IVF7 1028 aa12.89□□□□□ -0.35
CHKA-203ENST00000525155 SCN4BQ8IWT1 228 aa12.89□□□□□ -0.35
CHKA-203ENST00000525155 FAM160A2Q8N612 972 aaPredicted RBP12.89□□□□□ -0.35
CHKA-203ENST00000525155 MRPS31Q92665 395 aaKnown RBP12.89□□□□□ -0.35
CHKA-203ENST00000525155 MYLPFQ96A32 169 aa12.89□□□□□ -0.35
CHKA-203ENST00000525155 PCED1BQ96HM7 432 aa12.89□□□□□ -0.35
CHKA-203ENST00000525155 PCMTD1Q96MG8 357 aaPredicted RBP12.89□□□□□ -0.35
CHKA-203ENST00000525155 ERGIC2Q96RQ1 377 aa12.89□□□□□ -0.35
CHKA-203ENST00000525155 ELOVL4Q9GZR5 314 aa12.89□□□□□ -0.35
CHKA-203ENST00000525155 RNF38Q9H0F5 515 aa12.89□□□□□ -0.35
CHKA-203ENST00000525155 SDCBP2Q9H190 292 aa12.89□□□□□ -0.35
CHKA-203ENST00000525155 ECT2Q9H8V3 914 aa12.89□□□□□ -0.35
CHKA-203ENST00000525155 RTN4Q9NQC3 1192 aaKnown RBP12.89□□□□□ -0.35
CHKA-203ENST00000525155 RXFP3Q9NSD7 469 aa12.89□□□□□ -0.35
CHKA-203ENST00000525155 THG1LQ9NWX6 298 aaKnown RBP12.89□□□□□ -0.35
CHKA-203ENST00000525155 EHD2Q9NZN4 543 aa12.89□□□□□ -0.35
CHKA-203ENST00000525155 USP18Q9UMW8 372 aa12.89□□□□□ -0.35
CHKA-203ENST00000525155 PCDHB4Q9Y5E5 795 aa12.89□□□□□ -0.35
CHKA-203ENST00000525155 WNT6Q9Y6F9 365 aa12.89□□□□□ -0.35
CHKA-203ENST00000525155 EPG5Q9HCE0 2579 aa12.89□□□□□ -0.35
CHKA-203ENST00000525155 A0A1B0GTH6 734 aa12.88□□□□□ -0.35
CHKA-203ENST00000525155 A0A1W2PQC6 194 aa12.88□□□□□ -0.35
CHKA-203ENST00000525155 TRIM66O15016 1216 aa12.88□□□□□ -0.35
CHKA-203ENST00000525155 UBASH3AP57075 661 aa12.88□□□□□ -0.35
CHKA-203ENST00000525155 SLC8A3P57103 927 aa12.88□□□□□ -0.35
CHKA-203ENST00000525155 BPIFB4P59827 614 aa12.88□□□□□ -0.35
CHKA-203ENST00000525155 FANCCQ00597 558 aa12.88□□□□□ -0.35
CHKA-203ENST00000525155 CYP27A1Q02318 531 aa12.88□□□□□ -0.35
CHKA-203ENST00000525155 MTF1Q14872 753 aa12.88□□□□□ -0.35
CHKA-203ENST00000525155 STILQ15468 1287 aa12.88□□□□□ -0.35
CHKA-203ENST00000525155 MDH1BQ5I0G3 518 aa12.88□□□□□ -0.35
CHKA-203ENST00000525155 KLHDC7AQ5VTJ3 777 aa12.88□□□□□ -0.35
CHKA-203ENST00000525155 RRAGAQ7L523 313 aa12.88□□□□□ -0.35
CHKA-203ENST00000525155 APTXQ7Z2E3 356 aaKnown RBP12.88□□□□□ -0.35
CHKA-203ENST00000525155 ACOT1Q86TX2 421 aa12.88□□□□□ -0.35
CHKA-203ENST00000525155 SFTPA1Q8IWL2 248 aa12.88□□□□□ -0.35
CHKA-203ENST00000525155 GPR161Q8N6U8 529 aaKnown RBP12.88□□□□□ -0.35
CHKA-203ENST00000525155 NEK11Q8NG66 645 aa12.88□□□□□ -0.35
CHKA-203ENST00000525155 SH3RF2Q8TEC5 729 aa12.88□□□□□ -0.35
CHKA-203ENST00000525155 OSCP1Q8WVF1 389 aa12.88□□□□□ -0.35
CHKA-203ENST00000525155 IQCDQ96DY2 449 aa12.88□□□□□ -0.35
CHKA-203ENST00000525155 SPATA17Q96L03 361 aa12.88□□□□□ -0.35
CHKA-203ENST00000525155 HEXIM2Q96MH2 286 aaKnown RBP12.88□□□□□ -0.35
CHKA-203ENST00000525155 GCNAQ96QF7 691 aa12.88□□□□□ -0.35
CHKA-203ENST00000525155 LSM14BQ9BX40 385 aaKnown RBP12.88□□□□□ -0.35
CHKA-203ENST00000525155 DPEP3Q9H4B8 488 aa12.88□□□□□ -0.35
CHKA-203ENST00000525155 SEMA4GQ9NTN9 838 aa12.88□□□□□ -0.35
CHKA-203ENST00000525155 ZMYM5Q9UJ78 669 aa12.88□□□□□ -0.35
CHKA-203ENST00000525155 CNTN6Q9UQ52 1028 aa12.88□□□□□ -0.35
CHKA-203ENST00000525155 ZNF840PA6NDX5 716 aa12.87□□□□□ -0.35
CHKA-203ENST00000525155 PRR5-ARHGAP8B1AHC4 643 aa12.87□□□□□ -0.35
CHKA-203ENST00000525155 CLDN5O00501 218 aa12.87□□□□□ -0.35
CHKA-203ENST00000525155 RNF40O75150 1001 aa12.87□□□□□ -0.35
CHKA-203ENST00000525155 VDRP11473 427 aa12.87□□□□□ -0.35
CHKA-203ENST00000525155 UCHL3P15374 230 aa12.87□□□□□ -0.35
CHKA-203ENST00000525155 ANXA13P27216 316 aa12.87□□□□□ -0.35
CHKA-203ENST00000525155 CNR2P34972 360 aa12.87□□□□□ -0.35
CHKA-203ENST00000525155 ARHGAP8P85298 464 aa12.87□□□□□ -0.35
CHKA-203ENST00000525155 USP4Q13107 963 aa12.87□□□□□ -0.35
CHKA-203ENST00000525155 PPP2R5DQ14738 602 aa12.87□□□□□ -0.35
CHKA-203ENST00000525155 SYCP1Q15431 976 aa12.87□□□□□ -0.35
CHKA-203ENST00000525155 CCDC6Q16204 474 aa12.87□□□□□ -0.35
CHKA-203ENST00000525155 TMEM270Q6UE05 265 aa12.87□□□□□ -0.35
CHKA-203ENST00000525155 PAQR9Q6ZVX9 377 aa12.87□□□□□ -0.35
CHKA-203ENST00000525155 KBTBD6Q86V97 674 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms