RNA–Protein interactions for RNA: ENST00000522638.1

IGKV3D-34-201, Transcript of immunoglobulin kappa variable 3D-34 (pseudogene), humanhuman

BASIC

Gene IGKV3D-34, Length 302 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-34-201ENST00000522638 DDR2Q16832 855 aa6.33□□□□□ -1.4
IGKV3D-34-201ENST00000522638 SKIDA1Q1XH10 827 aa6.33□□□□□ -1.4
IGKV3D-34-201ENST00000522638 SEZ6Q53EL9 994 aa6.33□□□□□ -1.4
IGKV3D-34-201ENST00000522638 MPZL3Q6UWV2 235 aa6.33□□□□□ -1.4
IGKV3D-34-201ENST00000522638 SMC5Q8IY18 1101 aa6.33□□□□□ -1.4
IGKV3D-34-201ENST00000522638 EID2Q8N6I1 236 aa6.33□□□□□ -1.4
IGKV3D-34-201ENST00000522638 NAT16Q8N8M0 369 aa6.33□□□□□ -1.4
IGKV3D-34-201ENST00000522638 LEO1Q8WVC0 666 aaPredicted RBP6.33□□□□□ -1.4
IGKV3D-34-201ENST00000522638 PRR11Q96HE9 360 aaPredicted RBP6.33□□□□□ -1.4
IGKV3D-34-201ENST00000522638 MMS19Q96T76 1030 aa6.33□□□□□ -1.4
IGKV3D-34-201ENST00000522638 ELF4Q99607 663 aaPredicted RBP6.33□□□□□ -1.4
IGKV3D-34-201ENST00000522638 PKMYT1Q99640 499 aa6.33□□□□□ -1.4
IGKV3D-34-201ENST00000522638 RNF26Q9BY78 433 aaPredicted RBP6.33□□□□□ -1.4
IGKV3D-34-201ENST00000522638 RNF38Q9H0F5 515 aa6.33□□□□□ -1.4
IGKV3D-34-201ENST00000522638 TTC12Q9H892 705 aaPredicted RBP6.33□□□□□ -1.4
IGKV3D-34-201ENST00000522638 POLR1BQ9H9Y6 1135 aa6.33□□□□□ -1.4
IGKV3D-34-201ENST00000522638 SH3GLB2Q9NR46 395 aa6.33□□□□□ -1.4
IGKV3D-34-201ENST00000522638 THSD1Q9NS62 852 aa6.33□□□□□ -1.4
IGKV3D-34-201ENST00000522638 PCDHB5Q9Y5E4 795 aa6.33□□□□□ -1.4
IGKV3D-34-201ENST00000522638 NAV3Q8IVL0 2385 aa6.33□□□□□ -1.4
IGKV3D-34-201ENST00000522638 TTC26A0AVF1 554 aa6.32□□□□□ -1.4
IGKV3D-34-201ENST00000522638 CDRT15L2A8MXV6 281 aa6.32□□□□□ -1.4
IGKV3D-34-201ENST00000522638 ZBTB24O43167 697 aaPredicted RBP6.32□□□□□ -1.4
IGKV3D-34-201ENST00000522638 PPFIA2O75334 1257 aa6.32□□□□□ -1.4
IGKV3D-34-201ENST00000522638 PRPF40AO75400 957 aaKnown RBP6.32□□□□□ -1.4
IGKV3D-34-201ENST00000522638 SPATA31C1P0DKV0 1188 aa6.32□□□□□ -1.4
IGKV3D-34-201ENST00000522638 C7P10643 843 aa6.32□□□□□ -1.4
IGKV3D-34-201ENST00000522638 SFTPCP11686 197 aa6.32□□□□□ -1.4
IGKV3D-34-201ENST00000522638 GCFC2P16383 781 aaKnown RBP6.32□□□□□ -1.4
IGKV3D-34-201ENST00000522638 CKMT2P17540 419 aa6.32□□□□□ -1.4
IGKV3D-34-201ENST00000522638 CYP11B2P19099 503 aa6.32□□□□□ -1.4
IGKV3D-34-201ENST00000522638 GRNP28799 593 aaKnown RBP6.32□□□□□ -1.4
IGKV3D-34-201ENST00000522638 GRIK1P39086 918 aa6.32□□□□□ -1.4
IGKV3D-34-201ENST00000522638 COPAP53621 1224 aa6.32□□□□□ -1.4
IGKV3D-34-201ENST00000522638 NLRP5P59047 1200 aa6.32□□□□□ -1.4
IGKV3D-34-201ENST00000522638 RPL10AP62906 217 aaKnown RBP6.32□□□□□ -1.4
IGKV3D-34-201ENST00000522638 GAD2Q05329 585 aa6.32□□□□□ -1.4
IGKV3D-34-201ENST00000522638 GRIN1Q05586 938 aa6.32□□□□□ -1.4
IGKV3D-34-201ENST00000522638 ENPP2Q13822 863 aa6.32□□□□□ -1.4
IGKV3D-34-201ENST00000522638 PPP2R5AQ15172 486 aa6.32□□□□□ -1.4
IGKV3D-34-201ENST00000522638 CCDC142Q17RM4 750 aa6.32□□□□□ -1.4
IGKV3D-34-201ENST00000522638 PROX2Q3B8N5 592 aa6.32□□□□□ -1.4
IGKV3D-34-201ENST00000522638 PRAMEF14Q5SWL7 426 aa6.32□□□□□ -1.4
IGKV3D-34-201ENST00000522638 CREB3L3Q68CJ9 461 aa6.32□□□□□ -1.4
IGKV3D-34-201ENST00000522638 ZNF787Q6DD87 383 aa6.32□□□□□ -1.4
IGKV3D-34-201ENST00000522638 CHD1LQ86WJ1 897 aa6.32□□□□□ -1.4
IGKV3D-34-201ENST00000522638 BLIDQ8IZY5 108 aa6.32□□□□□ -1.4
IGKV3D-34-201ENST00000522638 RUFY2Q8WXA3 655 aa6.32□□□□□ -1.4
IGKV3D-34-201ENST00000522638 SNX19Q92543 992 aa6.32□□□□□ -1.4
IGKV3D-34-201ENST00000522638 ZBTB45Q96K62 511 aaPredicted RBP6.32□□□□□ -1.4
IGKV3D-34-201ENST00000522638 CCDC43Q96MW1 224 aaKnown RBP6.32□□□□□ -1.4
IGKV3D-34-201ENST00000522638 NUP58Q9BVL2 599 aa6.32□□□□□ -1.4
IGKV3D-34-201ENST00000522638 TARS2Q9BW92 718 aaKnown RBP6.32□□□□□ -1.4
IGKV3D-34-201ENST00000522638 TRIM9Q9C026 710 aa6.32□□□□□ -1.4
IGKV3D-34-201ENST00000522638 LSG1Q9H089 658 aaKnown RBP6.32□□□□□ -1.4
IGKV3D-34-201ENST00000522638 ABCB6Q9NP58 842 aa6.32□□□□□ -1.4
IGKV3D-34-201ENST00000522638 CFAP97Q9P2B7 532 aa6.32□□□□□ -1.4
IGKV3D-34-201ENST00000522638 DEC1Q9P2X7 70 aa6.32□□□□□ -1.4
IGKV3D-34-201ENST00000522638 TJP2Q9UDY2 1190 aa6.32□□□□□ -1.4
IGKV3D-34-201ENST00000522638 UBQLN1Q9UMX0 589 aaKnown RBP6.32□□□□□ -1.4
IGKV3D-34-201ENST00000522638 CPQQ9Y646 472 aa6.32□□□□□ -1.4
IGKV3D-34-201ENST00000522638 RP1P56715 2156 aa6.32□□□□□ -1.4
IGKV3D-34-201ENST00000522638 SDK2Q58EX2 2172 aa6.32□□□□□ -1.4
IGKV3D-34-201ENST00000522638 PIRO00625 290 aa6.31□□□□□ -1.4
IGKV3D-34-201ENST00000522638 VILLO15195 856 aa6.31□□□□□ -1.4
IGKV3D-34-201ENST00000522638 TSPAN3O60637 253 aa6.31□□□□□ -1.4
IGKV3D-34-201ENST00000522638 USP12O75317 370 aa6.31□□□□□ -1.4
IGKV3D-34-201ENST00000522638 OAS1P00973 400 aaKnown RBP6.31□□□□□ -1.4
IGKV3D-34-201ENST00000522638 WNT1P04628 370 aa6.31□□□□□ -1.4
IGKV3D-34-201ENST00000522638 ITGAVP06756 1048 aa6.31□□□□□ -1.4
IGKV3D-34-201ENST00000522638 RNF224P0DH78 156 aa6.31□□□□□ -1.4
IGKV3D-34-201ENST00000522638 CYP2F1P24903 491 aa6.31□□□□□ -1.4
IGKV3D-34-201ENST00000522638 CD27P26842 260 aa6.31□□□□□ -1.4
IGKV3D-34-201ENST00000522638 ACSL1P33121 698 aa6.31□□□□□ -1.4
IGKV3D-34-201ENST00000522638 CASRP41180 1078 aa6.31□□□□□ -1.4
IGKV3D-34-201ENST00000522638 PDE6CP51160 858 aa6.31□□□□□ -1.4
IGKV3D-34-201ENST00000522638 NUCB1Q02818 461 aa6.31□□□□□ -1.4
IGKV3D-34-201ENST00000522638 SRSF6Q13247 344 aaKnown RBP6.31□□□□□ -1.4
IGKV3D-34-201ENST00000522638 NOLC1Q14978 699 aaKnown RBP eCLIP6.31□□□□□ -1.4
IGKV3D-34-201ENST00000522638 NECTIN1Q15223 517 aa6.31□□□□□ -1.4
IGKV3D-34-201ENST00000522638 C9orf57Q5W0N0 161 aa6.31□□□□□ -1.4
IGKV3D-34-201ENST00000522638 GRAMD4Q6IC98 578 aa6.31□□□□□ -1.4
IGKV3D-34-201ENST00000522638 SDE2Q6IQ49 451 aa6.31□□□□□ -1.4
IGKV3D-34-201ENST00000522638 NEK8Q86SG6 692 aa6.31□□□□□ -1.4
IGKV3D-34-201ENST00000522638 CLEC14AQ86T13 490 aa6.31□□□□□ -1.4
IGKV3D-34-201ENST00000522638 FSIP1Q8NA03 581 aa6.31□□□□□ -1.4
IGKV3D-34-201ENST00000522638 ZNF564Q8TBZ8 553 aaPredicted RBP6.31□□□□□ -1.4
IGKV3D-34-201ENST00000522638 BIRC7Q96CA5 298 aa6.31□□□□□ -1.4
IGKV3D-34-201ENST00000522638 SGF29Q96ES7 293 aa6.31□□□□□ -1.4
IGKV3D-34-201ENST00000522638 CCNL2Q96S94 520 aaPredicted RBP6.31□□□□□ -1.4
IGKV3D-34-201ENST00000522638 DUSP9Q99956 384 aaKnown RBP6.31□□□□□ -1.4
IGKV3D-34-201ENST00000522638 SLC4A5Q9BY07 1137 aa6.31□□□□□ -1.4
IGKV3D-34-201ENST00000522638 MRPL4Q9BYD3 311 aaKnown RBP6.31□□□□□ -1.4
IGKV3D-34-201ENST00000522638 CCSER1Q9C0I3 900 aa6.31□□□□□ -1.4
IGKV3D-34-201ENST00000522638 HAPLN2Q9GZV7 340 aa6.31□□□□□ -1.4
IGKV3D-34-201ENST00000522638 SLC25A18Q9H1K4 315 aa6.31□□□□□ -1.4
IGKV3D-34-201ENST00000522638 TMEM134Q9H6X4 195 aa6.31□□□□□ -1.4
IGKV3D-34-201ENST00000522638 PLEKHA5Q9HAU0 1116 aa6.31□□□□□ -1.4
IGKV3D-34-201ENST00000522638 POLD4Q9HCU8 107 aa6.31□□□□□ -1.4
IGKV3D-34-201ENST00000522638 GEMIN8Q9NWZ8 242 aaKnown RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms