RNA–Protein interactions for RNA: ENST00000489583.1

APTX-229, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 397 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-229ENST00000489583 CHD8Q9HCK8 2581 aa20.6■□□□□ 0.89
APTX-229ENST00000489583 CNOT1A5YKK6 2376 aaKnown RBP20.59■□□□□ 0.89
APTX-229ENST00000489583 A0A0A0MRY4 1105 aa20.59■□□□□ 0.89
APTX-229ENST00000489583 CFIP05156 583 aa20.59■□□□□ 0.89
APTX-229ENST00000489583 CSRP1P21291 193 aaKnown RBP20.59■□□□□ 0.89
APTX-229ENST00000489583 CACNA2D1P54289 1103 aa20.59■□□□□ 0.89
APTX-229ENST00000489583 CDH8P55286 799 aa20.59■□□□□ 0.89
APTX-229ENST00000489583 IRX4P78413 519 aa20.59■□□□□ 0.89
APTX-229ENST00000489583 SGSM1Q2NKQ1 1148 aa20.59■□□□□ 0.89
APTX-229ENST00000489583 C10orf76Q5T2E6 689 aa20.59■□□□□ 0.89
APTX-229ENST00000489583 FOXD4L5Q5VV16 416 aaPredicted RBP20.59■□□□□ 0.89
APTX-229ENST00000489583 HDDC3Q8N4P3 179 aa20.59■□□□□ 0.89
APTX-229ENST00000489583 SCAMP5Q8TAC9 235 aa20.59■□□□□ 0.89
APTX-229ENST00000489583 OLIG1Q8TAK6 271 aa20.59■□□□□ 0.89
APTX-229ENST00000489583 CEP76Q8TAP6 659 aa20.59■□□□□ 0.89
APTX-229ENST00000489583 FOXD4L4Q8WXT5 416 aaPredicted RBP20.59■□□□□ 0.89
APTX-229ENST00000489583 VRTNQ9H8Y1 702 aa20.59■□□□□ 0.89
APTX-229ENST00000489583 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.59■□□□□ 0.89
APTX-229ENST00000489583 CFAP45Q9UL16 551 aa20.59■□□□□ 0.89
APTX-229ENST00000489583 FRMD4BQ9Y2L6 1034 aa20.59■□□□□ 0.89
APTX-229ENST00000489583 KMT2BQ9UMN6 2715 aaPredicted RBP20.59■□□□□ 0.89
APTX-229ENST00000489583 EML5Q05BV3 1969 aa20.58■□□□□ 0.89
APTX-229ENST00000489583 PATE3B3GLJ2 98 aa20.58■□□□□ 0.89
APTX-229ENST00000489583 KIF20AO95235 890 aa20.58■□□□□ 0.89
APTX-229ENST00000489583 RPN1P04843 607 aaKnown RBP20.58■□□□□ 0.89
APTX-229ENST00000489583 HOXD12P35452 270 aa20.58■□□□□ 0.89
APTX-229ENST00000489583 MAPK8P45983 427 aa20.58■□□□□ 0.89
APTX-229ENST00000489583 RPL6Q02878 288 aaKnown RBP20.58■□□□□ 0.89
APTX-229ENST00000489583 BMT2Q1RMZ1 405 aa20.58■□□□□ 0.89
APTX-229ENST00000489583 GAB4Q2WGN9 574 aa20.58■□□□□ 0.89
APTX-229ENST00000489583 FOXD4L6Q3SYB3 417 aaPredicted RBP20.58■□□□□ 0.89
APTX-229ENST00000489583 EMC10Q5UCC4 262 aa20.58■□□□□ 0.89
APTX-229ENST00000489583 SNX30Q5VWJ9 437 aa20.58■□□□□ 0.89
APTX-229ENST00000489583 GRAMD4Q6IC98 578 aa20.58■□□□□ 0.89
APTX-229ENST00000489583 SHC4Q6S5L8 630 aa20.58■□□□□ 0.89
APTX-229ENST00000489583 FOXD4L3Q6VB84 417 aaPredicted RBP20.58■□□□□ 0.89
APTX-229ENST00000489583 ACOT1Q86TX2 421 aa20.58■□□□□ 0.89
APTX-229ENST00000489583 ZNF516Q92618 1163 aa20.58■□□□□ 0.89
APTX-229ENST00000489583 XYLT2Q9H1B5 865 aa20.58■□□□□ 0.89
APTX-229ENST00000489583 CCSER2Q9H7U1 834 aa20.58■□□□□ 0.89
APTX-229ENST00000489583 GMIPQ9P107 970 aa20.58■□□□□ 0.89
APTX-229ENST00000489583 WDR35Q9P2L0 1181 aa20.58■□□□□ 0.89
APTX-229ENST00000489583 HOXC11O43248 304 aaPredicted RBP20.57■□□□□ 0.88
APTX-229ENST00000489583 TLR5O60602 858 aa20.57■□□□□ 0.88
APTX-229ENST00000489583 TULP3O75386 442 aa20.57■□□□□ 0.88
APTX-229ENST00000489583 PROS1P07225 676 aa20.57■□□□□ 0.88
APTX-229ENST00000489583 HOXB2P14652 356 aa20.57■□□□□ 0.88
APTX-229ENST00000489583 KIR2DL1P43626 348 aaPredicted RBP20.57■□□□□ 0.88
APTX-229ENST00000489583 CASP4P49662 377 aa20.57■□□□□ 0.88
APTX-229ENST00000489583 GFPT1Q06210 699 aaPredicted RBP20.57■□□□□ 0.88
APTX-229ENST00000489583 TADA2BQ86TJ2 420 aa20.57■□□□□ 0.88
APTX-229ENST00000489583 C12orf40Q86WS4 652 aa20.57■□□□□ 0.88
APTX-229ENST00000489583 CCDC150Q8NCX0 1101 aa20.57■□□□□ 0.88
APTX-229ENST00000489583 PARD3BQ8TEW8 1205 aa20.57■□□□□ 0.88
APTX-229ENST00000489583 TAF4BQ92750 862 aa20.57■□□□□ 0.88
APTX-229ENST00000489583 CCDC47Q96A33 483 aaKnown RBP20.57■□□□□ 0.88
APTX-229ENST00000489583 DNAJC17Q9NVM6 304 aaKnown RBP20.57■□□□□ 0.88
APTX-229ENST00000489583 THADAQ6YHU6 1953 aa20.56■□□□□ 0.88
APTX-229ENST00000489583 ZNF217O75362 1048 aa20.56■□□□□ 0.88
APTX-229ENST00000489583 FAM200BP0CF97 657 aa20.56■□□□□ 0.88
APTX-229ENST00000489583 NTSR1P30989 418 aa20.56■□□□□ 0.88
APTX-229ENST00000489583 ATP5C1P36542 298 aaKnown RBP20.56■□□□□ 0.88
APTX-229ENST00000489583 MAP3K7CLP57077 242 aa20.56■□□□□ 0.88
APTX-229ENST00000489583 DUOXA1Q1HG43 343 aa20.56■□□□□ 0.88
APTX-229ENST00000489583 ATL3Q6DD88 541 aa20.56■□□□□ 0.88
APTX-229ENST00000489583 UNC93AQ86WB7 457 aa20.56■□□□□ 0.88
APTX-229ENST00000489583 BBS7Q8IWZ6 715 aa20.56■□□□□ 0.88
APTX-229ENST00000489583 CHPFQ8IZ52 775 aa20.56■□□□□ 0.88
APTX-229ENST00000489583 TERB1Q8NA31 727 aa20.56■□□□□ 0.88
APTX-229ENST00000489583 DUSP9Q99956 384 aaKnown RBP20.56■□□□□ 0.88
APTX-229ENST00000489583 BBS2Q9BXC9 721 aa20.56■□□□□ 0.88
APTX-229ENST00000489583 TMEM30AQ9NV96 361 aa20.56■□□□□ 0.88
APTX-229ENST00000489583 NME7Q9Y5B8 376 aa20.56■□□□□ 0.88
APTX-229ENST00000489583 LRRIQ3A6PVS8 624 aaPredicted RBP20.55■□□□□ 0.88
APTX-229ENST00000489583 NEDD8-MDP1E9PL57 170 aa20.55■□□□□ 0.88
APTX-229ENST00000489583 GIPC1O14908 333 aa20.55■□□□□ 0.88
APTX-229ENST00000489583 PIK3CAP42336 1068 aa20.55■□□□□ 0.88
APTX-229ENST00000489583 EHHADHQ08426 723 aa20.55■□□□□ 0.88
APTX-229ENST00000489583 CUL4BQ13620 913 aa20.55■□□□□ 0.88
APTX-229ENST00000489583 UNQ6494/PRO21346Q6UXR6 183 aa20.55■□□□□ 0.88
APTX-229ENST00000489583 SFTPA1Q8IWL2 248 aa20.55■□□□□ 0.88
APTX-229ENST00000489583 SLC2A14Q8TDB8 520 aa20.55■□□□□ 0.88
APTX-229ENST00000489583 GTPBP2Q9BX10 602 aaKnown RBP20.55■□□□□ 0.88
APTX-229ENST00000489583 ZDHHC4Q9NPG8 344 aa20.55■□□□□ 0.88
APTX-229ENST00000489583 MAP1BP46821 2468 aaKnown RBP20.55■□□□□ 0.88
APTX-229ENST00000489583 LAMA1P25391 3075 aa20.55■□□□□ 0.88
APTX-229ENST00000489583 CDX4O14627 284 aaPredicted RBP20.54■□□□□ 0.88
APTX-229ENST00000489583 CALUO43852 315 aaPredicted RBP20.54■□□□□ 0.88
APTX-229ENST00000489583 NDUFS2O75306 463 aa20.54■□□□□ 0.88
APTX-229ENST00000489583 CCDC130P13994 396 aa20.54■□□□□ 0.88
APTX-229ENST00000489583 ENGP17813 658 aa20.54■□□□□ 0.88
APTX-229ENST00000489583 CASP1P29466 404 aa20.54■□□□□ 0.88
APTX-229ENST00000489583 ANP32AP39687 249 aaKnown RBP20.54■□□□□ 0.88
APTX-229ENST00000489583 PTGER3P43115 390 aa20.54■□□□□ 0.88
APTX-229ENST00000489583 NDST1P52848 882 aa20.54■□□□□ 0.88
APTX-229ENST00000489583 E2F5Q15329 346 aa20.54■□□□□ 0.88
APTX-229ENST00000489583 CEP135Q66GS9 1140 aa20.54■□□□□ 0.88
APTX-229ENST00000489583 SLC23A3Q6PIS1 610 aa20.54■□□□□ 0.88
APTX-229ENST00000489583 TMEM25Q86YD3 366 aa20.54■□□□□ 0.88
APTX-229ENST00000489583 FUKQ8N0W3 1084 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms