RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 PRUNE1Q86TP1 453 aa18.46■□□□□ 0.55
HLA-DQB1-204ENST00000399084 SCUBE3Q8IX30 993 aa18.46■□□□□ 0.55
HLA-DQB1-204ENST00000399084 FAM71DQ8N9W8 422 aa18.46■□□□□ 0.55
HLA-DQB1-204ENST00000399084 ACSS3Q9H6R3 686 aa18.46■□□□□ 0.55
HLA-DQB1-204ENST00000399084 NGRNQ9NPE2 291 aaKnown RBP18.46■□□□□ 0.55
HLA-DQB1-204ENST00000399084 SAE1Q9UBE0 346 aaPredicted RBP18.46■□□□□ 0.55
HLA-DQB1-204ENST00000399084 SCN1AP35498 2009 aa18.46■□□□□ 0.55
HLA-DQB1-204ENST00000399084 TRIM66O15016 1216 aa18.46■□□□□ 0.55
HLA-DQB1-204ENST00000399084 TREHO43280 583 aa18.46■□□□□ 0.55
HLA-DQB1-204ENST00000399084 ITGBL1O95965 494 aaPredicted RBP18.46■□□□□ 0.55
HLA-DQB1-204ENST00000399084 GSTA2P09210 222 aa18.46■□□□□ 0.55
HLA-DQB1-204ENST00000399084 IL4RP24394 825 aa18.46■□□□□ 0.55
HLA-DQB1-204ENST00000399084 TAF5Q15542 800 aa18.46■□□□□ 0.55
HLA-DQB1-204ENST00000399084 C15orf59Q2T9L4 293 aaPredicted RBP18.46■□□□□ 0.55
HLA-DQB1-204ENST00000399084 CDKL3Q8IVW4 592 aaPredicted RBP18.46■□□□□ 0.55
HLA-DQB1-204ENST00000399084 PALM2Q8IXS6 379 aa18.46■□□□□ 0.55
HLA-DQB1-204ENST00000399084 LRRC34Q8IZ02 419 aa18.46■□□□□ 0.55
HLA-DQB1-204ENST00000399084 KCTD13Q8WZ19 329 aa18.46■□□□□ 0.55
HLA-DQB1-204ENST00000399084 LRRC39Q96DD0 335 aa18.46■□□□□ 0.55
HLA-DQB1-204ENST00000399084 SMC6Q96SB8 1091 aa18.46■□□□□ 0.55
HLA-DQB1-204ENST00000399084 FAM49BQ9NUQ9 324 aa18.46■□□□□ 0.55
HLA-DQB1-204ENST00000399084 FLRT1Q9NZU1 646 aa18.46■□□□□ 0.55
HLA-DQB1-204ENST00000399084 XPO7Q9UIA9 1087 aaKnown RBP18.46■□□□□ 0.55
HLA-DQB1-204ENST00000399084 IPPQ9Y573 584 aa18.46■□□□□ 0.55
HLA-DQB1-204ENST00000399084 TRIP11Q15643 1979 aa18.45■□□□□ 0.54
HLA-DQB1-204ENST00000399084 H7C0C1 242 aa18.45■□□□□ 0.54
HLA-DQB1-204ENST00000399084 PPEF2O14830 753 aa18.45■□□□□ 0.54
HLA-DQB1-204ENST00000399084 STX2P32856 288 aa18.45■□□□□ 0.54
HLA-DQB1-204ENST00000399084 ATP5OP48047 213 aa18.45■□□□□ 0.54
HLA-DQB1-204ENST00000399084 GDF10P55107 478 aa18.45■□□□□ 0.54
HLA-DQB1-204ENST00000399084 LILRA4P59901 499 aa18.45■□□□□ 0.54
HLA-DQB1-204ENST00000399084 PURAQ00577 322 aaKnown RBP18.45■□□□□ 0.54
HLA-DQB1-204ENST00000399084 RNF187Q5TA31 235 aaPredicted RBP18.45■□□□□ 0.54
HLA-DQB1-204ENST00000399084 SCYL2Q6P3W7 929 aa18.45■□□□□ 0.54
HLA-DQB1-204ENST00000399084 RGS9BPQ6ZS82 235 aa18.45■□□□□ 0.54
HLA-DQB1-204ENST00000399084 RPAINQ86UA6 219 aa18.45■□□□□ 0.54
HLA-DQB1-204ENST00000399084 SRRM1Q8IYB3 904 aaKnown RBP18.45■□□□□ 0.54
HLA-DQB1-204ENST00000399084 TMEM86AQ8N2M4 240 aa18.45■□□□□ 0.54
HLA-DQB1-204ENST00000399084 GBP7Q8N8V2 638 aaPredicted RBP18.45■□□□□ 0.54
HLA-DQB1-204ENST00000399084 APBB2Q92870 758 aa18.45■□□□□ 0.54
HLA-DQB1-204ENST00000399084 SNRNP25Q9BV90 132 aaKnown RBP18.45■□□□□ 0.54
HLA-DQB1-204ENST00000399084 KLC2Q9H0B6 622 aa18.45■□□□□ 0.54
HLA-DQB1-204ENST00000399084 USP29Q9HBJ7 922 aa18.45■□□□□ 0.54
HLA-DQB1-204ENST00000399084 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.45■□□□□ 0.54
HLA-DQB1-204ENST00000399084 RABGEF1Q9UJ41 708 aa18.45■□□□□ 0.54
HLA-DQB1-204ENST00000399084 GJD2Q9UKL4 321 aa18.45■□□□□ 0.54
HLA-DQB1-204ENST00000399084 HES2Q9Y543 173 aa18.45■□□□□ 0.54
HLA-DQB1-204ENST00000399084 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.45■□□□□ 0.54
HLA-DQB1-204ENST00000399084 GSTA1P08263 222 aa18.44■□□□□ 0.54
HLA-DQB1-204ENST00000399084 AKAP5P24588 427 aa18.44■□□□□ 0.54
HLA-DQB1-204ENST00000399084 GCAP28676 217 aa18.44■□□□□ 0.54
HLA-DQB1-204ENST00000399084 HDAC4P56524 1084 aa18.44■□□□□ 0.54
HLA-DQB1-204ENST00000399084 NKX3-2P78367 333 aa18.44■□□□□ 0.54
HLA-DQB1-204ENST00000399084 ATP11AP98196 1134 aa18.44■□□□□ 0.54
HLA-DQB1-204ENST00000399084 ACTN3Q08043 901 aaPredicted RBP18.44■□□□□ 0.54
HLA-DQB1-204ENST00000399084 SH3PXD2AQ5TCZ1 1133 aa18.44■□□□□ 0.54
HLA-DQB1-204ENST00000399084 CST9Q5W186 159 aa18.44■□□□□ 0.54
HLA-DQB1-204ENST00000399084 ADGRD1Q6QNK2 874 aa18.44■□□□□ 0.54
HLA-DQB1-204ENST00000399084 C3orf62Q6ZUJ4 267 aa18.44■□□□□ 0.54
HLA-DQB1-204ENST00000399084 ADGRF2Q8IZF7 708 aa18.44■□□□□ 0.54
HLA-DQB1-204ENST00000399084 CYP4X1Q8N118 509 aa18.44■□□□□ 0.54
HLA-DQB1-204ENST00000399084 TMEM130Q8N3G9 435 aa18.44■□□□□ 0.54
HLA-DQB1-204ENST00000399084 MCUQ8NE86 351 aa18.44■□□□□ 0.54
HLA-DQB1-204ENST00000399084 TMEM40Q8WWA1 233 aa18.44■□□□□ 0.54
HLA-DQB1-204ENST00000399084 CYTH2Q99418 400 aa18.44■□□□□ 0.54
HLA-DQB1-204ENST00000399084 MTG1Q9BT17 334 aaPredicted RBP18.44■□□□□ 0.54
HLA-DQB1-204ENST00000399084 DHRS4Q9BTZ2 278 aa18.44■□□□□ 0.54
HLA-DQB1-204ENST00000399084 DUSP16Q9BY84 665 aa18.44■□□□□ 0.54
HLA-DQB1-204ENST00000399084 ZFYVE28Q9HCC9 887 aa18.44■□□□□ 0.54
HLA-DQB1-204ENST00000399084 PNPLA8Q9NP80 782 aa18.44■□□□□ 0.54
HLA-DQB1-204ENST00000399084 CTNNAL1Q9UBT7 734 aa18.44■□□□□ 0.54
HLA-DQB1-204ENST00000399084 UTRNP46939 3433 aa18.44■□□□□ 0.54
HLA-DQB1-204ENST00000399084 CCT8L1PA6NM43 557 aa18.43■□□□□ 0.54
HLA-DQB1-204ENST00000399084 HACD1B0YJ81 288 aa18.43■□□□□ 0.54
HLA-DQB1-204ENST00000399084 SNX3O60493 162 aa18.43■□□□□ 0.54
HLA-DQB1-204ENST00000399084 SUN1O94901 812 aa18.43■□□□□ 0.54
HLA-DQB1-204ENST00000399084 GBP2P32456 591 aaPredicted RBP18.43■□□□□ 0.54
HLA-DQB1-204ENST00000399084 MATKP42679 507 aa18.43■□□□□ 0.54
HLA-DQB1-204ENST00000399084 AIF1P55008 147 aa18.43■□□□□ 0.54
HLA-DQB1-204ENST00000399084 IRX5P78411 483 aaPredicted RBP18.43■□□□□ 0.54
HLA-DQB1-204ENST00000399084 KCNJ11Q14654 390 aa18.43■□□□□ 0.54
HLA-DQB1-204ENST00000399084 TMED2Q15363 201 aa18.43■□□□□ 0.54
HLA-DQB1-204ENST00000399084 CDO1Q16878 200 aa18.43■□□□□ 0.54
HLA-DQB1-204ENST00000399084 GLRA4Q5JXX5 417 aa18.43■□□□□ 0.54
HLA-DQB1-204ENST00000399084 RASAL3Q86YV0 1011 aa18.43■□□□□ 0.54
HLA-DQB1-204ENST00000399084 PQLC3Q8N755 202 aa18.43■□□□□ 0.54
HLA-DQB1-204ENST00000399084 SMG8Q8ND04 991 aaKnown RBP18.43■□□□□ 0.54
HLA-DQB1-204ENST00000399084 CCT6BQ92526 530 aa18.43■□□□□ 0.54
HLA-DQB1-204ENST00000399084 FERMT1Q9BQL6 677 aa18.43■□□□□ 0.54
HLA-DQB1-204ENST00000399084 NRDE2Q9H7Z3 1164 aa18.43■□□□□ 0.54
HLA-DQB1-204ENST00000399084 RRAGCQ9HB90 399 aa18.43■□□□□ 0.54
HLA-DQB1-204ENST00000399084 TBK1Q9UHD2 729 aa18.43■□□□□ 0.54
HLA-DQB1-204ENST00000399084 NME7Q9Y5B8 376 aa18.43■□□□□ 0.54
HLA-DQB1-204ENST00000399084 IGF2BP3O00425 579 aaKnown RBP eCLIP18.43■□□□□ 0.54
HLA-DQB1-204ENST00000399084 TRDMT1O14717 391 aaKnown RBP18.43■□□□□ 0.54
HLA-DQB1-204ENST00000399084 GABRDO14764 452 aa18.43■□□□□ 0.54
HLA-DQB1-204ENST00000399084 GABBR2O75899 941 aa18.43■□□□□ 0.54
HLA-DQB1-204ENST00000399084 ZBED1O96006 694 aa18.43■□□□□ 0.54
HLA-DQB1-204ENST00000399084 KRT15P19012 456 aa18.43■□□□□ 0.54
HLA-DQB1-204ENST00000399084 L1CAMP32004 1257 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms