RNA–Protein interactions for RNA: ENST00000265641.9

CPT1A-201, Transcript of carnitine palmitoyltransferase 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPT1A, Length 5,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-201ENST00000265641 USP17L19D6RCP7 530 aa11.04□□□□□ -0.64
CPT1A-201ENST00000265641 USP17L20D6RJB6 530 aa11.04□□□□□ -0.64
CPT1A-201ENST00000265641 SIN3BO75182 1162 aa11.04□□□□□ -0.64
CPT1A-201ENST00000265641 TM7SF2O76062 418 aa11.04□□□□□ -0.64
CPT1A-201ENST00000265641 VCLP18206 1134 aa11.04□□□□□ -0.64
CPT1A-201ENST00000265641 FDFT1P37268 417 aa11.04□□□□□ -0.64
CPT1A-201ENST00000265641 RFX5P48382 616 aaPredicted RBP11.04□□□□□ -0.64
CPT1A-201ENST00000265641 FXR2P51116 673 aaKnown RBP eCLIP11.04□□□□□ -0.64
CPT1A-201ENST00000265641 SPIRE1Q08AE8 756 aa11.04□□□□□ -0.64
CPT1A-201ENST00000265641 USP17L24Q0WX57 530 aa11.04□□□□□ -0.64
CPT1A-201ENST00000265641 FAM45BPQ6NSW5 357 aa11.04□□□□□ -0.64
CPT1A-201ENST00000265641 USP17L6PQ6QN14 398 aa11.04□□□□□ -0.64
CPT1A-201ENST00000265641 HACE1Q8IYU2 909 aa11.04□□□□□ -0.64
CPT1A-201ENST00000265641 DAGLBQ8NCG7 672 aa11.04□□□□□ -0.64
CPT1A-201ENST00000265641 EXD1Q8NHP7 514 aa11.04□□□□□ -0.64
CPT1A-201ENST00000265641 ISCA1Q9BUE6 129 aa11.04□□□□□ -0.64
CPT1A-201ENST00000265641 TRIM39Q9HCM9 518 aa11.04□□□□□ -0.64
CPT1A-201ENST00000265641 TCF7L2Q9NQB0 619 aa11.04□□□□□ -0.64
CPT1A-201ENST00000265641 LNPEPQ9UIQ6 1025 aa11.04□□□□□ -0.64
CPT1A-201ENST00000265641 PPME1Q9Y570 386 aa11.04□□□□□ -0.64
CPT1A-201ENST00000265641 CNTNAP5Q8WYK1 1306 aa11.04□□□□□ -0.64
CPT1A-201ENST00000265641 PRKAA1Q13131 559 aa11.04□□□□□ -0.64
CPT1A-201ENST00000265641 TRIM28Q13263 835 aaKnown RBP11.04□□□□□ -0.64
CPT1A-201ENST00000265641 MAPK11Q15759 364 aa11.04□□□□□ -0.64
CPT1A-201ENST00000265641 TMEM139Q8IV31 216 aa11.04□□□□□ -0.64
CPT1A-201ENST00000265641 TASP1Q9H6P5 420 aa11.04□□□□□ -0.64
CPT1A-201ENST00000265641 TUFT1Q9NNX1 390 aa11.04□□□□□ -0.64
CPT1A-201ENST00000265641 SALL1Q9NSC2 1324 aa11.04□□□□□ -0.64
CPT1A-201ENST00000265641 SYNJ2BP-COX16A0A087WUM0 186 aa11.04□□□□□ -0.64
CPT1A-201ENST00000265641 TRIM64CA6NLI5 447 aa11.04□□□□□ -0.64
CPT1A-201ENST00000265641 TIMM44O43615 452 aa11.04□□□□□ -0.64
CPT1A-201ENST00000265641 TSC22D2O75157 780 aa11.04□□□□□ -0.64
CPT1A-201ENST00000265641 NFX1Q12986 1120 aaKnown RBP11.04□□□□□ -0.64
CPT1A-201ENST00000265641 ZNF544Q6NX49 715 aa11.04□□□□□ -0.64
CPT1A-201ENST00000265641 FAM9CQ8IZT9 166 aa11.04□□□□□ -0.64
CPT1A-201ENST00000265641 C8orf59Q8N0T1 100 aaPredicted RBP11.04□□□□□ -0.64
CPT1A-201ENST00000265641 PQLC1Q8N2U9 271 aa11.04□□□□□ -0.64
CPT1A-201ENST00000265641 TCP10LQ8TDR4 215 aa11.04□□□□□ -0.64
CPT1A-201ENST00000265641 PYDC1Q8WXC3 89 aa11.04□□□□□ -0.64
CPT1A-201ENST00000265641 COX16Q9P0S2 106 aa11.04□□□□□ -0.64
CPT1A-201ENST00000265641 USP20Q9Y2K6 914 aa11.04□□□□□ -0.64
CPT1A-201ENST00000265641 CCDC182A6NF36 153 aa11.04□□□□□ -0.64
CPT1A-201ENST00000265641 PIK3R1P27986 724 aa11.04□□□□□ -0.64
CPT1A-201ENST00000265641 BFSP2Q13515 415 aa11.04□□□□□ -0.64
CPT1A-201ENST00000265641 CCDC142Q17RM4 750 aa11.04□□□□□ -0.64
CPT1A-201ENST00000265641 CCDC157Q569K6 752 aa11.04□□□□□ -0.64
CPT1A-201ENST00000265641 C6orf10Q5SRN2 563 aa11.04□□□□□ -0.64
CPT1A-201ENST00000265641 KRT74Q7RTS7 529 aa11.04□□□□□ -0.64
CPT1A-201ENST00000265641 AHI1Q8N157 1196 aa11.04□□□□□ -0.64
CPT1A-201ENST00000265641 PROX1Q92786 737 aa11.04□□□□□ -0.64
CPT1A-201ENST00000265641 OTUB1Q96FW1 271 aaPredicted RBP11.04□□□□□ -0.64
CPT1A-201ENST00000265641 MARCH7Q9H992 704 aa11.04□□□□□ -0.64
CPT1A-201ENST00000265641 CCNB1IP1Q9NPC3 277 aa11.04□□□□□ -0.64
CPT1A-201ENST00000265641 RAB6BQ9NRW1 208 aa11.04□□□□□ -0.64
CPT1A-201ENST00000265641 COMMD8Q9NX08 183 aa11.04□□□□□ -0.64
CPT1A-201ENST00000265641 CD163L1Q9NR16 1453 aa11.04□□□□□ -0.64
CPT1A-201ENST00000265641 SPDYE5A6NIY4 337 aa11.03□□□□□ -0.64
CPT1A-201ENST00000265641 TBX3O15119 743 aa11.03□□□□□ -0.64
CPT1A-201ENST00000265641 SDC4P31431 198 aa11.03□□□□□ -0.64
CPT1A-201ENST00000265641 GP5P40197 560 aa11.03□□□□□ -0.64
CPT1A-201ENST00000265641 IST1P53990 364 aa11.03□□□□□ -0.64
CPT1A-201ENST00000265641 MMRN1Q13201 1228 aa11.03□□□□□ -0.64
CPT1A-201ENST00000265641 TRIM71Q2Q1W2 868 aaKnown RBP11.03□□□□□ -0.64
CPT1A-201ENST00000265641 ZC2HC1CQ53FD0 456 aaPredicted RBP11.03□□□□□ -0.64
CPT1A-201ENST00000265641 ANO7Q6IWH7 933 aa11.03□□□□□ -0.64
CPT1A-201ENST00000265641 ACAD10Q6JQN1 1059 aa11.03□□□□□ -0.64
CPT1A-201ENST00000265641 ALLCQ8N6M5 410 aa11.03□□□□□ -0.64
CPT1A-201ENST00000265641 LEMD2Q8NC56 503 aa11.03□□□□□ -0.64
CPT1A-201ENST00000265641 FBXO36Q8NEA4 188 aa11.03□□□□□ -0.64
CPT1A-201ENST00000265641 SCFD2Q8WU76 684 aa11.03□□□□□ -0.64
CPT1A-201ENST00000265641 DYRK4Q9NR20 520 aa11.03□□□□□ -0.64
CPT1A-201ENST00000265641 CACNA2D2Q9NY47 1150 aa11.03□□□□□ -0.64
CPT1A-201ENST00000265641 MAGED2Q9UNF1 606 aaPredicted RBP11.03□□□□□ -0.64
CPT1A-201ENST00000265641 FLT1P17948 1338 aa11.03□□□□□ -0.64
CPT1A-201ENST00000265641 ADGRA2Q96PE1 1338 aa11.03□□□□□ -0.64
CPT1A-201ENST00000265641 SNAP23O00161 211 aa11.03□□□□□ -0.64
CPT1A-201ENST00000265641 CCNKO75909 580 aa11.03□□□□□ -0.64
CPT1A-201ENST00000265641 PSMB9P28065 219 aa11.03□□□□□ -0.64
CPT1A-201ENST00000265641 SERPINB5P36952 375 aa11.03□□□□□ -0.64
CPT1A-201ENST00000265641 MKRN4PQ13434 485 aaPredicted RBP11.03□□□□□ -0.64
CPT1A-201ENST00000265641 CDO1Q16878 200 aa11.03□□□□□ -0.64
CPT1A-201ENST00000265641 FAM98BQ52LJ0 330 aaKnown RBP11.03□□□□□ -0.64
CPT1A-201ENST00000265641 FAM160B1Q5W0V3 765 aa11.03□□□□□ -0.64
CPT1A-201ENST00000265641 DUPD1Q68J44 220 aa11.03□□□□□ -0.64
CPT1A-201ENST00000265641 DENND5AQ6IQ26 1287 aa11.03□□□□□ -0.64
CPT1A-201ENST00000265641 FOXR2Q6PJQ5 311 aa11.03□□□□□ -0.64
CPT1A-201ENST00000265641 NT5DC3Q86UY8 548 aa11.03□□□□□ -0.64
CPT1A-201ENST00000265641 SLC25A41Q8N5S1 370 aa11.03□□□□□ -0.64
CPT1A-201ENST00000265641 POLR1BQ9H9Y6 1135 aa11.03□□□□□ -0.64
CPT1A-201ENST00000265641 SSU72Q9NP77 194 aaKnown RBP11.03□□□□□ -0.64
CPT1A-201ENST00000265641 PCSK1NQ9UHG2 260 aa11.03□□□□□ -0.64
CPT1A-201ENST00000265641 ITGA11Q9UKX5 1188 aa11.03□□□□□ -0.64
CPT1A-201ENST00000265641 CLDN25C9JDP6 229 aa11.03□□□□□ -0.64
CPT1A-201ENST00000265641 PRPF4O43172 522 aaKnown RBP eCLIP11.03□□□□□ -0.642e-7■■■■□ 23.1
CPT1A-201ENST00000265641 ITGA4P13612 1032 aa11.03□□□□□ -0.64
CPT1A-201ENST00000265641 TALDO1P37837 337 aa11.03□□□□□ -0.64
CPT1A-201ENST00000265641 POU5F1BQ06416 359 aa11.03□□□□□ -0.64
CPT1A-201ENST00000265641 PPIL2Q13356 520 aa11.03□□□□□ -0.64
CPT1A-201ENST00000265641 SMYD1Q8NB12 490 aa11.03□□□□□ -0.64
CPT1A-201ENST00000265641 HM13Q8TCT9 377 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms