RNA–Protein interactions for RNA: snR85

snR85, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeast

Gene snR85, Length 171 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR85	snR85	NCL1	P38205	684 aa	Known RBP	4.28	□□□□□ -1.72
snR85	snR85	SDH1	Q00711	640 aa		4.28	□□□□□ -1.72
snR85	snR85	HDA2	Q06629	674 aa		4.28	□□□□□ -1.72
snR85	snR85	SLP1	Q12232	587 aa		4.28	□□□□□ -1.72
snR85	snR85	TY4A-H	Q6Q5P6	413 aa		4.28	□□□□□ -1.72
snR85	snR85	GAS1	P22146	559 aa	Known RBP	4.27	□□□□□ -1.73
snR85	snR85	MLF3	P32047	452 aa		4.27	□□□□□ -1.73
snR85	snR85	GLC3	P32775	704 aa		4.27	□□□□□ -1.73
snR85	snR85	MRP10	O75012	95 aa		4.26	□□□□□ -1.73
snR85	snR85	REC8	Q12188	680 aa		4.26	□□□□□ -1.73
snR85	snR85	DFG16	Q99234	619 aa		4.26	□□□□□ -1.73
snR85	snR85	SWI5	P08153	709 aa		4.25	□□□□□ -1.73
snR85	snR85	MSB1	P21339	1137 aa	Known RBP	4.25	□□□□□ -1.73
snR85	snR85	SKP1	P52286	194 aa		4.25	□□□□□ -1.73
snR85	snR85	SOH1	P38633	127 aa		4.24	□□□□□ -1.73
snR85	snR85	TFB3	Q03290	321 aa		4.24	□□□□□ -1.73
snR85	snR85	THI80	P35202	319 aa		4.23	□□□□□ -1.73
snR85	snR85	MCM1	P11746	286 aa		4.22	□□□□□ -1.73
snR85	snR85	TED1	P40533	473 aa		4.22	□□□□□ -1.73
snR85	snR85	UTP13	Q05946	817 aa	Known RBP	4.22	□□□□□ -1.73
snR85	snR85	CDA2	Q06703	312 aa		4.22	□□□□□ -1.73
snR85	snR85	Q0182	Q9ZZW1	134 aa		4.22	□□□□□ -1.73
snR85	snR85	MTO1	P53070	669 aa		4.21	□□□□□ -1.74
snR85	snR85	YNR021W	P53723	404 aa	Known RBP	4.21	□□□□□ -1.74
snR85	snR85	YNR040W	P53736	256 aa		4.21	□□□□□ -1.74
snR85	snR85	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
snR85	snR85	SAS10	Q12136	610 aa	Predicted RBP	4.21	□□□□□ -1.74
snR85	snR85	YHL008C	P38750	627 aa		4.2	□□□□□ -1.74
snR85	snR85	DSE4	P53753	1117 aa		4.19	□□□□□ -1.74
snR85	snR85	TSA1	P34760	196 aa	Known RBP	4.18	□□□□□ -1.74
snR85	snR85	FLR1	P38124	548 aa		4.18	□□□□□ -1.74
snR85	snR85	APM2	P38700	605 aa		4.18	□□□□□ -1.74
snR85	snR85	GIP2	P40036	548 aa		4.18	□□□□□ -1.74
snR85	snR85	CUS1	Q02554	436 aa	Predicted RBP	4.18	□□□□□ -1.74
snR85	snR85	YNR065C	P53751	1116 aa		4.17	□□□□□ -1.74
snR85	snR85	GCD1	P09032	578 aa	Predicted RBP	4.16	□□□□□ -1.74
snR85	snR85	ATG3	P40344	310 aa		4.15	□□□□□ -1.75
snR85	snR85	IDI1	P15496	288 aa		4.14	□□□□□ -1.75
snR85	snR85	RPS6A	P0CX37	236 aa	Known RBP	4.13	□□□□□ -1.75
snR85	snR85	RPS6B	P0CX38	236 aa	Predicted RBP	4.13	□□□□□ -1.75
snR85	snR85	AIM9	P40053	627 aa	Known RBP	4.13	□□□□□ -1.75
snR85	snR85	SOK2	P53438	785 aa	Predicted RBP	4.12	□□□□□ -1.75
snR85	snR85	GSF2	Q04697	403 aa	Known RBP	4.11	□□□□□ -1.75
snR85	snR85	AIM7	Q12156	149 aa		4.11	□□□□□ -1.75
snR85	snR85	YDJ1	P25491	409 aa	Known RBP	4.1	□□□□□ -1.75
snR85	snR85	CSE4	P36012	229 aa		4.1	□□□□□ -1.75
snR85	snR85	SPT5	P27692	1063 aa	Known RBP	4.09	□□□□□ -1.75
snR85	snR85	KAP122	P32767	1081 aa		4.09	□□□□□ -1.75
snR85	snR85	NFS1	P25374	497 aa		4.08	□□□□□ -1.76
snR85	snR85	SSA2	P10592	639 aa	Known RBP	4.07	□□□□□ -1.76
snR85	snR85	PRP6	P19735	899 aa	Predicted RBP	4.07	□□□□□ -1.76
snR85	snR85	YML122C	Q03207	126 aa		4.07	□□□□□ -1.76
snR85	snR85	RPC31	P17890	251 aa		4.06	□□□□□ -1.76
snR85	snR85	NTH2	P35172	780 aa		4.06	□□□□□ -1.76
snR85	snR85	NCE103	P53615	221 aa		4.06	□□□□□ -1.76
snR85	snR85	UTP4	Q06679	776 aa	Known RBP	4.06	□□□□□ -1.76
snR85	snR85	HSP78	P33416	811 aa		4.05	□□□□□ -1.76
snR85	snR85	YER156C	P40093	338 aa	Known RBP	4.05	□□□□□ -1.76
snR85	snR85	ITC1	P53125	1264 aa		4.02	□□□□□ -1.77
snR85	snR85	MSH6	Q03834	1242 aa		4.02	□□□□□ -1.77
snR85	snR85	ABZ1	P37254	787 aa	Predicted RBP	4.01	□□□□□ -1.77
snR85	snR85	YFL034W	P43564	1073 aa		4.01	□□□□□ -1.77
snR85	snR85	GIC2	Q06648	383 aa		4.01	□□□□□ -1.77
snR85	snR85	PAN5	P38787	379 aa		4	□□□□□ -1.77
snR85	snR85	YPP1	P46951	817 aa		3.99	□□□□□ -1.77
snR85	snR85	PNS1	Q12412	539 aa		3.98	□□□□□ -1.77
snR85	snR85	MAE1	P36013	669 aa	Known RBP	3.97	□□□□□ -1.77
snR85	snR85	AIM3	P38266	947 aa	Known RBP	3.96	□□□□□ -1.78
snR85	snR85	SCD5	P34758	872 aa		3.95	□□□□□ -1.78
snR85	snR85	POL5	P39985	1022 aa	Known RBP	3.95	□□□□□ -1.78
snR85	snR85	NSI1	Q12457	570 aa		3.95	□□□□□ -1.78
snR85	snR85	CYT1	P07143	309 aa		3.94	□□□□□ -1.78
snR85	snR85	TUB2	P02557	457 aa	Known RBP	3.93	□□□□□ -1.78
snR85	snR85	PDI1	P17967	522 aa	Known RBP	3.93	□□□□□ -1.78
snR85	snR85	HXT5	P38695	592 aa		3.93	□□□□□ -1.78
snR85	snR85	QDR2	P40474	542 aa		3.93	□□□□□ -1.78
snR85	snR85	MMM1	P41800	426 aa		3.93	□□□□□ -1.78
snR85	snR85	YJL181W	P46987	611 aa		3.93	□□□□□ -1.78
snR85	snR85	WHI3	P34761	661 aa	Known RBP	3.92	□□□□□ -1.78
snR85	snR85	YBL036C	P38197	257 aa		3.92	□□□□□ -1.78
snR85	snR85	CIT3	P43635	486 aa		3.91	□□□□□ -1.78
snR85	snR85	RDS2	P19541	446 aa	Known RBP	3.9	□□□□□ -1.79
snR85	snR85	GUP1	P53154	560 aa		3.9	□□□□□ -1.79
snR85	snR85	RIM8	P53179	542 aa		3.9	□□□□□ -1.79
snR85	snR85	ORC3	P54790	616 aa		3.9	□□□□□ -1.79
snR85	snR85	RSC2	Q06488	889 aa		3.9	□□□□□ -1.79
snR85	snR85	LEM3	P42838	414 aa		3.89	□□□□□ -1.79
snR85	snR85	KIP3	P53086	805 aa	Known RBP	3.89	□□□□□ -1.79
snR85	snR85	ELG1	Q12050	791 aa		3.89	□□□□□ -1.79
snR85	snR85	TSC13	Q99190	310 aa		3.89	□□□□□ -1.79
snR85	snR85	ERS1	P17261	260 aa		3.88	□□□□□ -1.79
snR85	snR85	RCM1	P53972	490 aa		3.88	□□□□□ -1.79
snR85	snR85	YOR296W	Q08748	1289 aa		3.88	□□□□□ -1.79
snR85	snR85	INP51	P40559	946 aa	Known RBP	3.87	□□□□□ -1.79
snR85	snR85	PPT1	P53043	513 aa		3.87	□□□□□ -1.79
snR85	snR85	ENO2	P00925	437 aa	Known RBP	3.86	□□□□□ -1.79
snR85	snR85	SUP45	P12385	437 aa	Known RBP	3.86	□□□□□ -1.79
snR85	snR85	SHM2	P37291	469 aa	Known RBP	3.86	□□□□□ -1.79
snR85	snR85	OYE3	P41816	400 aa	Predicted RBP	3.86	□□□□□ -1.79
snR85	snR85	TOD6	P34219	525 aa		3.85	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms