RNA–Protein interactions for RNA: YPR056W

TFB4, Transcript of Subunit of TFIIH complex, yeastyeast

Gene TFB4, Length 1,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFB4YPR056W SPC42P36094 363 aa8.05□□□□□ -1.12
TFB4YPR056W YFL066CP43538 392 aa8.05□□□□□ -1.12
TFB4YPR056W ATG36P46983 293 aa8.05□□□□□ -1.12
TFB4YPR056W SKP1P52286 194 aa8.05□□□□□ -1.12
TFB4YPR056W FAR11P53917 953 aa8.05□□□□□ -1.12
TFB4YPR056W SUB1P54000 292 aaKnown RBP8.05□□□□□ -1.12
TFB4YPR056W RRN6P32786 894 aa8.04□□□□□ -1.12
TFB4YPR056W UBX7P38349 436 aa8.04□□□□□ -1.12
TFB4YPR056W RTS3P53289 263 aa8.04□□□□□ -1.12
TFB4YPR056W PUF6Q04373 656 aaKnown RBP8.04□□□□□ -1.12
TFB4YPR056W PUS1Q12211 544 aaKnown RBP8.04□□□□□ -1.12
TFB4YPR056W KAP122P32767 1081 aa8.03□□□□□ -1.12
TFB4YPR056W NSG2P53898 299 aa8.03□□□□□ -1.12
TFB4YPR056W DOS2P54858 310 aa8.03□□□□□ -1.12
TFB4YPR056W TY1A-DR2Q03964 440 aaKnown RBP8.03□□□□□ -1.12
TFB4YPR056W KNS1P32350 737 aaPredicted RBP8.02□□□□□ -1.13
TFB4YPR056W ASF1P32447 279 aa8.02□□□□□ -1.13
TFB4YPR056W HEH2Q03281 663 aa8.02□□□□□ -1.13
TFB4YPR056W THI72Q08579 599 aa8.02□□□□□ -1.13
TFB4YPR056W SUV3P32580 737 aa8.01□□□□□ -1.13
TFB4YPR056W MDJ1P35191 511 aa8.01□□□□□ -1.13
TFB4YPR056W MSC7P38694 644 aa8.01□□□□□ -1.13
TFB4YPR056W MTO1P53070 669 aa8.01□□□□□ -1.13
TFB4YPR056W VPS72Q03388 795 aa8□□□□□ -1.13
TFB4YPR056W CAB1Q04430 367 aa8□□□□□ -1.13
TFB4YPR056W PDC5P16467 563 aaKnown RBP7.99□□□□□ -1.13
TFB4YPR056W RPC31P17890 251 aa7.98□□□□□ -1.13
TFB4YPR056W YJR008WP47085 338 aa7.98□□□□□ -1.13
TFB4YPR056W NCL1P38205 684 aaKnown RBP7.97□□□□□ -1.13
TFB4YPR056W CUS1Q02554 436 aaPredicted RBP7.97□□□□□ -1.13
TFB4YPR056W MRPL33P20084 86 aa7.96□□□□□ -1.14
TFB4YPR056W HEM3P28789 327 aa7.96□□□□□ -1.14
TFB4YPR056W MET1P36150 593 aa7.96□□□□□ -1.14
TFB4YPR056W NOB1Q08444 459 aaKnown RBP7.96□□□□□ -1.14
TFB4YPR056W SRS2P12954 1174 aa7.95□□□□□ -1.14
TFB4YPR056W YBR197CP38306 217 aa7.95□□□□□ -1.14
TFB4YPR056W APM2P38700 605 aa7.95□□□□□ -1.14
TFB4YPR056W OCA5P38738 679 aa7.95□□□□□ -1.14
TFB4YPR056W QDR2P40474 542 aa7.95□□□□□ -1.14
TFB4YPR056W ALD4P46367 519 aaKnown RBP7.95□□□□□ -1.14
TFB4YPR056W CWC15Q03772 175 aaKnown RBP7.95□□□□□ -1.14
TFB4YPR056W MCX1P38323 520 aaPredicted RBP7.94□□□□□ -1.14
TFB4YPR056W SSF1P38789 453 aaPredicted RBP7.94□□□□□ -1.14
TFB4YPR056W SBE2P42223 864 aaKnown RBP7.94□□□□□ -1.14
TFB4YPR056W RPL34AP87262 121 aaPredicted RBP7.93□□□□□ -1.14
TFB4YPR056W SEN54Q02825 467 aaPredicted RBP7.93□□□□□ -1.14
TFB4YPR056W PUN1Q06991 263 aa7.93□□□□□ -1.14
TFB4YPR056W YPR053CQ6Q5F3 151 aa7.93□□□□□ -1.14
TFB4YPR056W VMA3P25515 160 aa7.92□□□□□ -1.14
TFB4YPR056W CDC3P32457 520 aaKnown RBP7.92□□□□□ -1.14
TFB4YPR056W DYS1P38791 387 aa7.92□□□□□ -1.14
TFB4YPR056W YNR014WP53719 212 aa7.92□□□□□ -1.14
TFB4YPR056W YML083CQ04526 418 aa7.92□□□□□ -1.14
TFB4YPR056W TDA6Q06466 467 aa7.92□□□□□ -1.14
TFB4YPR056W GIN4Q12263 1142 aa7.92□□□□□ -1.14
TFB4YPR056W MDG1P53885 366 aa7.91□□□□□ -1.14
TFB4YPR056W BOI2P39969 1040 aa7.9□□□□□ -1.14
TFB4YPR056W PRK1P40494 810 aa7.9□□□□□ -1.14
TFB4YPR056W OSW7P43611 510 aa7.9□□□□□ -1.14
TFB4YPR056W FOX2Q02207 900 aaKnown RBP7.9□□□□□ -1.14
TFB4YPR056W LDH1P38139 375 aa7.89□□□□□ -1.15
TFB4YPR056W SKN7P38889 622 aa7.89□□□□□ -1.15
TFB4YPR056W FPR4Q06205 392 aaPredicted RBP7.89□□□□□ -1.15
TFB4YPR056W YOR296WQ08748 1289 aa7.89□□□□□ -1.15
TFB4YPR056W ISC10P32645 267 aa7.88□□□□□ -1.15
TFB4YPR056W LSB3P43603 459 aaKnown RBP7.88□□□□□ -1.15
TFB4YPR056W YNR040WP53736 256 aa7.88□□□□□ -1.15
TFB4YPR056W YAF9P53930 226 aa7.88□□□□□ -1.15
TFB4YPR056W YMR187CQ03236 431 aa7.88□□□□□ -1.15
TFB4YPR056W YER156CP40093 338 aaKnown RBP7.87□□□□□ -1.15
TFB4YPR056W GIP1P38229 639 aa7.86□□□□□ -1.15
TFB4YPR056W CCT8P47079 568 aaKnown RBP7.86□□□□□ -1.15
TFB4YPR056W ITC1P53125 1264 aa7.86□□□□□ -1.15
TFB4YPR056W TPO2P53283 614 aa7.86□□□□□ -1.15
TFB4YPR056W PNP1Q05788 311 aa7.86□□□□□ -1.15
TFB4YPR056W ISW1P38144 1129 aa7.84□□□□□ -1.15
TFB4YPR056W NMD2P38798 1089 aaKnown RBP7.84□□□□□ -1.15
TFB4YPR056W BUD21Q08492 214 aaPredicted RBP7.84□□□□□ -1.15
TFB4YPR056W NHA1Q99271 985 aa7.84□□□□□ -1.15
TFB4YPR056W IDI1P15496 288 aa7.83□□□□□ -1.16
TFB4YPR056W YBR287WP38355 427 aa7.83□□□□□ -1.16
TFB4YPR056W NAB2P32505 525 aaKnown RBP RIP-Chip data7.82□□□□□ -1.16 RIP-Chip
TFB4YPR056W MNN4P36044 1178 aa7.81□□□□□ -1.16
TFB4YPR056W ALG14P38242 237 aa7.81□□□□□ -1.16
TFB4YPR056W BSD2P38356 321 aa7.81□□□□□ -1.16
TFB4YPR056W JSN1P47135 1091 aaKnown RBP RIP-Chip data7.81□□□□□ -1.16not detected
TFB4YPR056W NNF1P47149 201 aa7.81□□□□□ -1.16
TFB4YPR056W GIS4Q04233 774 aa7.81□□□□□ -1.16
TFB4YPR056W APC11Q12157 165 aa7.81□□□□□ -1.16
TFB4YPR056W HAT1Q12341 374 aa7.81□□□□□ -1.16
TFB4YPR056W LSO1Q3E827 93 aa7.81□□□□□ -1.16
TFB4YPR056W MSN1P22148 382 aa7.8□□□□□ -1.16
TFB4YPR056W YCK2P23292 546 aaKnown RBP7.8□□□□□ -1.16
TFB4YPR056W PGM2P37012 569 aaKnown RBP7.8□□□□□ -1.16
TFB4YPR056W TPS3P38426 1054 aaKnown RBP7.8□□□□□ -1.16
TFB4YPR056W RSC2Q06488 889 aa7.8□□□□□ -1.16
TFB4YPR056W YDR215CQ12240 137 aa7.8□□□□□ -1.16
TFB4YPR056W NAR1P23503 491 aaKnown RBP7.79□□□□□ -1.16
TFB4YPR056W HXT8P40886 569 aa7.79□□□□□ -1.16
TFB4YPR056W UBX5Q06682 500 aa7.79□□□□□ -1.16
Retrieved 100 of 5,963 RNA–protein pairs in 10.4 ms