RNA–Protein interactions for RNA: YOR227W

HER1, Transcript of Protein of unknown function, yeastyeast

Gene HER1, Length 3,741 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HER1YOR227W GAL2P13181 574 aa2.47□□□□□ -2.01
HER1YOR227W CDC11P32458 415 aa2.47□□□□□ -2.01
HER1YOR227W ATG1P53104 897 aa2.47□□□□□ -2.01
HER1YOR227W BDF2Q07442 638 aa2.47□□□□□ -2.01
HER1YOR227W GAL11P19659 1081 aa2.46□□□□□ -2.01
HER1YOR227W KTR2P33550 425 aa2.46□□□□□ -2.01
HER1YOR227W GRS1P38088 690 aaKnown RBP2.46□□□□□ -2.01
HER1YOR227W ROM1P53046 1155 aa2.46□□□□□ -2.01
HER1YOR227W DNM1P54861 757 aa2.46□□□□□ -2.02
HER1YOR227W MCM2P29469 868 aa2.46□□□□□ -2.02
HER1YOR227W FPR3P38911 411 aaKnown RBP2.46□□□□□ -2.02
HER1YOR227W BOI2P39969 1040 aa2.46□□□□□ -2.02
HER1YOR227W YFR016CP43597 1233 aaKnown RBP2.46□□□□□ -2.02
HER1YOR227W KAR5Q04746 504 aa2.46□□□□□ -2.02
HER1YOR227W YDL121CQ07541 149 aa2.46□□□□□ -2.02
HER1YOR227W MMP1Q12372 583 aa2.46□□□□□ -2.02
HER1YOR227W PHO4P07270 312 aaKnown RBP2.45□□□□□ -2.02
HER1YOR227W VMA4P22203 233 aaKnown RBP2.45□□□□□ -2.02
HER1YOR227W SUV3P32580 737 aa2.45□□□□□ -2.02
HER1YOR227W NFU1P32860 256 aa2.45□□□□□ -2.02
HER1YOR227W UBX7P38349 436 aa2.45□□□□□ -2.02
HER1YOR227W GLO3P38682 493 aaKnown RBP2.45□□□□□ -2.02
HER1YOR227W YHR020WP38708 688 aaKnown RBP2.45□□□□□ -2.02
HER1YOR227W APL6P46682 809 aa2.45□□□□□ -2.02
HER1YOR227W SLM3Q12093 417 aa2.45□□□□□ -2.02
HER1YOR227W MHP1P43638 1398 aa2.45□□□□□ -2.02
HER1YOR227W BUD31P25337 157 aaPredicted RBP2.45□□□□□ -2.02
HER1YOR227W PPG1P32838 368 aa2.45□□□□□ -2.02
HER1YOR227W ESL2P36168 1195 aa2.45□□□□□ -2.02
HER1YOR227W FUI1P38196 639 aa2.45□□□□□ -2.02
HER1YOR227W TFG1P41895 735 aaPredicted RBP2.45□□□□□ -2.02
HER1YOR227W CAB1Q04430 367 aa2.45□□□□□ -2.02
HER1YOR227W YGL015CP33199 130 aa2.45□□□□□ -2.02
HER1YOR227W TOS1P38288 455 aa2.45□□□□□ -2.02
HER1YOR227W DOT5P40553 215 aa2.45□□□□□ -2.02
HER1YOR227W CWC22P53333 577 aaKnown RBP2.45□□□□□ -2.02
HER1YOR227W RPO41P13433 1351 aaKnown RBP2.45□□□□□ -2.02
HER1YOR227W VMA1P17255 1071 aaKnown RBP2.44□□□□□ -2.02
HER1YOR227W SPT5P27692 1063 aaKnown RBP2.44□□□□□ -2.02
HER1YOR227W SRP40P32583 406 aaPredicted RBP2.44□□□□□ -2.02
HER1YOR227W RAD54P32863 898 aa2.44□□□□□ -2.02
HER1YOR227W YKL091CP33324 310 aaKnown RBP2.44□□□□□ -2.02
HER1YOR227W RIA1P53893 1110 aa2.44□□□□□ -2.02
HER1YOR227W UBP3Q01477 912 aaKnown RBP RIP-Chip data2.44□□□□□ -2.02not detected
HER1YOR227W TAP42Q04372 366 aa2.44□□□□□ -2.02
HER1YOR227W SEC3P33332 1336 aaKnown RBP2.44□□□□□ -2.02
HER1YOR227W PIF1P07271 859 aa2.44□□□□□ -2.02
HER1YOR227W GUT1P32190 709 aa2.44□□□□□ -2.02
HER1YOR227W DAK2P43550 591 aa2.44□□□□□ -2.02
HER1YOR227W ACS2P52910 683 aaKnown RBP2.44□□□□□ -2.02
HER1YOR227W PNP1Q05788 311 aa2.44□□□□□ -2.02
HER1YOR227W MCM16Q12262 181 aa2.44□□□□□ -2.02
HER1YOR227W RAD2P07276 1031 aa2.44□□□□□ -2.02
HER1YOR227W YEF3P16521 1044 aaKnown RBP2.44□□□□□ -2.02
HER1YOR227W MPE1P35728 441 aaKnown RBP2.44□□□□□ -2.02
HER1YOR227W NAB3P38996 802 aaKnown RBP RIP-Chip data2.44□□□□□ -2.02not detected
HER1YOR227W IES5P40060 125 aa2.44□□□□□ -2.02
HER1YOR227W QDR1P40475 563 aa2.44□□□□□ -2.02
HER1YOR227W KTR7P40504 517 aa2.44□□□□□ -2.02
HER1YOR227W ACF4P47129 309 aa2.44□□□□□ -2.02
HER1YOR227W KIP3P53086 805 aaKnown RBP2.44□□□□□ -2.02
HER1YOR227W IMH1Q06704 911 aaKnown RBP2.44□□□□□ -2.02
HER1YOR227W YPR084WQ06821 456 aa2.44□□□□□ -2.02
HER1YOR227W ENT1Q12518 454 aa2.44□□□□□ -2.02
HER1YOR227W ISF1P32488 338 aa2.43□□□□□ -2.02
HER1YOR227W SLX5P32828 619 aaKnown RBP2.43□□□□□ -2.02
HER1YOR227W MNN1P39106 762 aa2.43□□□□□ -2.02
HER1YOR227W EMP47P43555 445 aa2.43□□□□□ -2.02
HER1YOR227W APP1P53933 587 aa2.43□□□□□ -2.02
HER1YOR227W MIP1P15801 1254 aa2.43□□□□□ -2.02
HER1YOR227W ARG8P18544 423 aa2.43□□□□□ -2.02
HER1YOR227W SEC6P32844 805 aa2.43□□□□□ -2.02
HER1YOR227W AIM21P40563 679 aa2.43□□□□□ -2.02
HER1YOR227W PEX8P53248 589 aa2.43□□□□□ -2.02
HER1YOR227W YOR238WQ08634 303 aa2.43□□□□□ -2.02
HER1YOR227W YOR378WQ08902 515 aa2.43□□□□□ -2.02
HER1YOR227W TOA1P32773 286 aa2.43□□□□□ -2.02
HER1YOR227W PAF1P38351 445 aa2.43□□□□□ -2.02
HER1YOR227W ITC1P53125 1264 aa2.43□□□□□ -2.02
HER1YOR227W FLO1P32768 1537 aa2.42□□□□□ -2.02
HER1YOR227W STI1P15705 589 aaKnown RBP RIP-Chip data2.42□□□□□ -2.02not detected
HER1YOR227W DUT1P33317 147 aa2.42□□□□□ -2.02
HER1YOR227W HUL5P53119 910 aa2.42□□□□□ -2.02
HER1YOR227W TGL2P54857 326 aa2.42□□□□□ -2.02
HER1YOR227W GIR2Q03768 265 aaPredicted RBP2.42□□□□□ -2.02
HER1YOR227W MTR4P47047 1073 aaKnown RBP2.42□□□□□ -2.02
HER1YOR227W FOL1P53848 824 aa2.42□□□□□ -2.02
HER1YOR227W NAF1P53919 492 aaKnown RBP2.42□□□□□ -2.02
HER1YOR227W YPR109WQ06104 294 aa2.42□□□□□ -2.02
HER1YOR227W LSO1Q3E827 93 aa2.42□□□□□ -2.02
HER1YOR227W TIM23P32897 222 aa2.42□□□□□ -2.02
HER1YOR227W VPS24P36095 224 aaKnown RBP2.42□□□□□ -2.02
HER1YOR227W POL5P39985 1022 aaKnown RBP2.42□□□□□ -2.02
HER1YOR227W YEN1P40028 759 aa2.42□□□□□ -2.02
HER1YOR227W TY4A-JP47023 414 aa2.42□□□□□ -2.02
HER1YOR227W POB3Q04636 552 aaKnown RBP2.42□□□□□ -2.02
HER1YOR227W RLP24Q07915 199 aaKnown RBP2.42□□□□□ -2.02
HER1YOR227W MOT1P32333 1867 aa2.41□□□□□ -2.02
HER1YOR227W GRX1P25373 110 aaKnown RBP2.41□□□□□ -2.02
HER1YOR227W CLB5P30283 435 aa2.41□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 72.6 ms