RNA–Protein interactions for RNA: YOR106W

VAM3, Transcript of Syntaxin-like vacuolar t-SNARE, yeastyeast

Gene VAM3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM3YOR106W FUR4P05316 633 aaKnown RBP8.18□□□□□ -1.1
VAM3YOR106W LDH1P38139 375 aa8.18□□□□□ -1.1
VAM3YOR106W NCL1P38205 684 aaKnown RBP8.18□□□□□ -1.1
VAM3YOR106W SKP1P52286 194 aa8.18□□□□□ -1.1
VAM3YOR106W RPC31P17890 251 aa8.17□□□□□ -1.1
VAM3YOR106W GEF1P37020 779 aa8.17□□□□□ -1.1
VAM3YOR106W APM2P38700 605 aa8.16□□□□□ -1.1
VAM3YOR106W HEH2Q03281 663 aa8.15□□□□□ -1.1
VAM3YOR106W TY1A-DR2Q03964 440 aaKnown RBP8.14□□□□□ -1.11
VAM3YOR106W GPM1P00950 247 aaKnown RBP8.13□□□□□ -1.11
VAM3YOR106W AI1P03875 834 aa8.13□□□□□ -1.11
VAM3YOR106W MSC7P38694 644 aa8.13□□□□□ -1.11
VAM3YOR106W KAR5Q04746 504 aa8.13□□□□□ -1.11
VAM3YOR106W YOR296WQ08748 1289 aa8.13□□□□□ -1.11
VAM3YOR106W GIP1P38229 639 aa8.12□□□□□ -1.11
VAM3YOR106W CDC3P32457 520 aaKnown RBP8.11□□□□□ -1.11
VAM3YOR106W BOL3P39724 118 aa8.11□□□□□ -1.11
VAM3YOR106W KNS1P32350 737 aaPredicted RBP8.1□□□□□ -1.11
VAM3YOR106W ISW1P38144 1129 aa8.1□□□□□ -1.11
VAM3YOR106W FIR1P40020 876 aa8.1□□□□□ -1.11
VAM3YOR106W SUT1P53032 299 aaKnown RBP8.1□□□□□ -1.11
VAM3YOR106W LSO1Q3E827 93 aa8.1□□□□□ -1.11
VAM3YOR106W PDC5P16467 563 aaKnown RBP8.09□□□□□ -1.11
VAM3YOR106W YBR287WP38355 427 aa8.09□□□□□ -1.11
VAM3YOR106W BSD2P38356 321 aa8.09□□□□□ -1.11
VAM3YOR106W HXT8P40886 569 aa8.09□□□□□ -1.11
VAM3YOR106W YNR040WP53736 256 aa8.09□□□□□ -1.11
VAM3YOR106W THI72Q08579 599 aa8.09□□□□□ -1.11
VAM3YOR106W NSG2P53898 299 aa8.08□□□□□ -1.12
VAM3YOR106W MSN1P22148 382 aa8.07□□□□□ -1.12
VAM3YOR106W BOI1P38041 980 aaKnown RBP8.07□□□□□ -1.12
VAM3YOR106W APC11Q12157 165 aa8.07□□□□□ -1.12
VAM3YOR106W NAB2P32505 525 aaKnown RBP RIP-Chip data8.06□□□□□ -1.12not detected
VAM3YOR106W ITC1P53125 1264 aa8.06□□□□□ -1.12
VAM3YOR106W YNR014WP53719 212 aa8.06□□□□□ -1.12
VAM3YOR106W RPB10P22139 70 aa8.05□□□□□ -1.12
VAM3YOR106W MET1P36150 593 aa8.05□□□□□ -1.12
VAM3YOR106W GLO3P38682 493 aaKnown RBP8.05□□□□□ -1.12
VAM3YOR106W PRK1P40494 810 aa8.05□□□□□ -1.12
VAM3YOR106W PHM7Q12252 991 aa8.05□□□□□ -1.12
VAM3YOR106W MDJ1P35191 511 aa8.04□□□□□ -1.12
VAM3YOR106W IDI1P15496 288 aa8.03□□□□□ -1.12
VAM3YOR106W SMC1P32908 1225 aa8.03□□□□□ -1.12
VAM3YOR106W ICP55P40051 511 aa8.03□□□□□ -1.12
VAM3YOR106W YER156CP40093 338 aaKnown RBP8.03□□□□□ -1.12
VAM3YOR106W BOI2P39969 1040 aa8.02□□□□□ -1.13
VAM3YOR106W QDR1P40475 563 aa8.02□□□□□ -1.13
VAM3YOR106W SBE2P42223 864 aaKnown RBP8.02□□□□□ -1.13
VAM3YOR106W ATG1P53104 897 aa8.02□□□□□ -1.13
VAM3YOR106W PUS1Q12211 544 aaKnown RBP8.02□□□□□ -1.13
VAM3YOR106W RAD55P38953 406 aa8.01□□□□□ -1.13
VAM3YOR106W YFL066CP43538 392 aa8.01□□□□□ -1.13
VAM3YOR106W RSC2Q06488 889 aa8.01□□□□□ -1.13
VAM3YOR106W KTR2P33550 425 aa8□□□□□ -1.13
VAM3YOR106W AIM46P38885 310 aa8□□□□□ -1.13
VAM3YOR106W HAT1Q12341 374 aa8□□□□□ -1.13
VAM3YOR106W NTA1P40354 457 aa7.99□□□□□ -1.13
VAM3YOR106W YIL165CP40446 119 aa7.99□□□□□ -1.13
VAM3YOR106W RGD2P43556 714 aa7.99□□□□□ -1.13
VAM3YOR106W ALG14P38242 237 aa7.98□□□□□ -1.13
VAM3YOR106W TDA6Q06466 467 aa7.98□□□□□ -1.13
VAM3YOR106W PPT1P53043 513 aa7.97□□□□□ -1.13
VAM3YOR106W UFD2P54860 961 aa7.97□□□□□ -1.13
VAM3YOR106W EMG1Q06287 252 aaKnown RBP7.97□□□□□ -1.13
VAM3YOR106W YBL113CQ7M4S9 792 aa7.97□□□□□ -1.13
VAM3YOR106W PGM2P37012 569 aaKnown RBP7.96□□□□□ -1.14
VAM3YOR106W GRS1P38088 690 aaKnown RBP7.96□□□□□ -1.14
VAM3YOR106W ACF4P47129 309 aa7.96□□□□□ -1.14
VAM3YOR106W NHA1Q99271 985 aa7.96□□□□□ -1.14
VAM3YOR106W IRS4P36115 615 aaKnown RBP7.95□□□□□ -1.14
VAM3YOR106W YJL181WP46987 611 aa7.95□□□□□ -1.14
VAM3YOR106W TIF6Q12522 245 aaKnown RBP7.95□□□□□ -1.14
VAM3YOR106W YPR053CQ6Q5F3 151 aa7.95□□□□□ -1.14
VAM3YOR106W NAR1P23503 491 aaKnown RBP7.94□□□□□ -1.14
VAM3YOR106W ERP5P38819 212 aa7.94□□□□□ -1.14
VAM3YOR106W PSY2P40164 858 aa7.94□□□□□ -1.14
VAM3YOR106W GIS4Q04233 774 aa7.94□□□□□ -1.14
VAM3YOR106W MRP10O75012 95 aa7.93□□□□□ -1.14
VAM3YOR106W TRL1P09880 827 aaKnown RBP7.93□□□□□ -1.14
VAM3YOR106W MCX1P38323 520 aaPredicted RBP7.93□□□□□ -1.14
VAM3YOR106W YMR187CQ03236 431 aa7.93□□□□□ -1.14
VAM3YOR106W MTC5Q03897 1148 aa7.92□□□□□ -1.14
VAM3YOR106W TRS120Q04183 1289 aa7.91□□□□□ -1.14
VAM3YOR106W SLP1Q12232 587 aa7.89□□□□□ -1.15
VAM3YOR106W FUS1P11710 512 aa7.88□□□□□ -1.15
VAM3YOR106W INP51P40559 946 aaKnown RBP7.88□□□□□ -1.15
VAM3YOR106W MDJ2P42834 146 aa7.88□□□□□ -1.15
VAM3YOR106W SSF1P38789 453 aaPredicted RBP7.87□□□□□ -1.15
VAM3YOR106W SOK2P53438 785 aaPredicted RBP7.86□□□□□ -1.15
VAM3YOR106W YNL011CP53980 444 aa7.85□□□□□ -1.15
VAM3YOR106W ALD3P54114 506 aa7.85□□□□□ -1.15
VAM3YOR106W RSC4Q02206 625 aa7.85□□□□□ -1.15
VAM3YOR106W YDR215CQ12240 137 aa7.85□□□□□ -1.15
VAM3YOR106W ECM2P38241 364 aaKnown RBP7.84□□□□□ -1.15
VAM3YOR106W RRM3P38766 723 aa7.84□□□□□ -1.15
VAM3YOR106W SKN7P38889 622 aa7.84□□□□□ -1.15
VAM3YOR106W GIP2P40036 548 aa7.84□□□□□ -1.15
VAM3YOR106W TED1P40533 473 aa7.84□□□□□ -1.15
VAM3YOR106W BIO5P53744 561 aaKnown RBP7.84□□□□□ -1.15
VAM3YOR106W PYC2P32327 1180 aaKnown RBP7.83□□□□□ -1.16
Retrieved 100 of 5,963 RNA–protein pairs in 61.6 ms