RNA–Protein interactions for RNA: YOR048C

RAT1, Transcript of Nuclear 5' to 3' single-stranded RNA exonuclease, yeastyeast

Gene RAT1, Length 3,021 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RAT1YOR048C WAR1Q03631 944 aa6.15□□□□□ -1.43
RAT1YOR048C APL4Q12028 832 aa6.15□□□□□ -1.43
RAT1YOR048C CDC15P27636 974 aa6.14□□□□□ -1.43
RAT1YOR048C MCM4P30665 933 aaKnown RBP6.14□□□□□ -1.43
RAT1YOR048C MSH4P40965 878 aaPredicted RBP6.14□□□□□ -1.43
RAT1YOR048C PEX14P53112 341 aa6.14□□□□□ -1.43
RAT1YOR048C BRE1Q07457 700 aaKnown RBP6.14□□□□□ -1.43
RAT1YOR048C HSP82P02829 709 aaKnown RBP6.14□□□□□ -1.43
RAT1YOR048C GDT1P38301 280 aaPredicted RBP6.14□□□□□ -1.43
RAT1YOR048C TCB1Q12466 1186 aa6.14□□□□□ -1.43
RAT1YOR048C RPT3P33298 428 aaKnown RBP6.13□□□□□ -1.43
RAT1YOR048C EPS1P40557 701 aa6.13□□□□□ -1.43
RAT1YOR048C HDA1P53973 706 aa6.13□□□□□ -1.43
RAT1YOR048C MEC3Q02574 474 aa6.13□□□□□ -1.43
RAT1YOR048C YPR204WQ08995 1032 aa6.13□□□□□ -1.43
RAT1YOR048C TMA16Q08687 178 aa6.13□□□□□ -1.43
RAT1YOR048C PSH1Q12161 406 aa6.12□□□□□ -1.43
RAT1YOR048C SEC18P18759 758 aaKnown RBP6.12□□□□□ -1.43
RAT1YOR048C PSY4P38193 441 aa6.12□□□□□ -1.43
RAT1YOR048C RRB1Q04225 511 aaKnown RBP6.12□□□□□ -1.43
RAT1YOR048C MLC1P53141 149 aa6.12□□□□□ -1.43
RAT1YOR048C YBP2P53169 641 aa6.12□□□□□ -1.43
RAT1YOR048C RGP1P16664 663 aa6.11□□□□□ -1.43
RAT1YOR048C LTV1P34078 463 aa6.11□□□□□ -1.43
RAT1YOR048C FKS3Q04952 1785 aa6.11□□□□□ -1.43
RAT1YOR048C PET123P17558 318 aa6.11□□□□□ -1.43
RAT1YOR048C VPS1P21576 704 aaKnown RBP6.11□□□□□ -1.43
RAT1YOR048C TLG2Q08144 397 aa6.11□□□□□ -1.43
RAT1YOR048C ARG8P18544 423 aa6.1□□□□□ -1.43
RAT1YOR048C BUD6P41697 788 aa6.1□□□□□ -1.43
RAT1YOR048C PTK2P47116 818 aaKnown RBP6.1□□□□□ -1.43
RAT1YOR048C AFT2Q08957 416 aa6.1□□□□□ -1.43
RAT1YOR048C ELG1Q12050 791 aa6.1□□□□□ -1.43
RAT1YOR048C YGR130CP53278 816 aa6.1□□□□□ -1.43
RAT1YOR048C APP1P53933 587 aa6.1□□□□□ -1.43
RAT1YOR048C GSY2P27472 705 aa6.09□□□□□ -1.43
RAT1YOR048C SER1P33330 395 aaKnown RBP6.09□□□□□ -1.43
RAT1YOR048C RRM3P38766 723 aa6.09□□□□□ -1.43
RAT1YOR048C HYR1P40581 163 aaKnown RBP6.09□□□□□ -1.43
RAT1YOR048C JSN1P47135 1091 aaKnown RBP RIP-Chip data6.09□□□□□ -1.43not detected
RAT1YOR048C CHO2P05374 869 aaKnown RBP6.09□□□□□ -1.43
RAT1YOR048C ATG13Q06628 738 aa6.09□□□□□ -1.43
RAT1YOR048C YKL068W-AQ3E826 78 aa6.09□□□□□ -1.43
RAT1YOR048C STR2P47164 639 aa6.09□□□□□ -1.44
RAT1YOR048C DDP1Q99321 188 aaKnown RBP6.09□□□□□ -1.44
RAT1YOR048C FBP26P32604 452 aa6.08□□□□□ -1.44
RAT1YOR048C TTI1P36097 1038 aa6.08□□□□□ -1.44
RAT1YOR048C STU2P46675 888 aa6.08□□□□□ -1.44
RAT1YOR048C GYL1Q04322 720 aa6.08□□□□□ -1.44
RAT1YOR048C ELM1P32801 640 aa6.08□□□□□ -1.44
RAT1YOR048C YKL133CP36066 463 aa6.08□□□□□ -1.44
RAT1YOR048C SEC9P40357 651 aa6.08□□□□□ -1.44
RAT1YOR048C YIR042CP40586 236 aa6.08□□□□□ -1.44
RAT1YOR048C CTF4Q01454 927 aa6.08□□□□□ -1.44
RAT1YOR048C YOL098CQ12496 1037 aa6.08□□□□□ -1.44
RAT1YOR048C LAM4P38800 1345 aa6.08□□□□□ -1.44
RAT1YOR048C PDC1P06169 563 aaKnown RBP6.07□□□□□ -1.44
RAT1YOR048C SAC6P32599 642 aaKnown RBP6.07□□□□□ -1.44
RAT1YOR048C SIS2P36024 562 aa6.07□□□□□ -1.44
RAT1YOR048C NOP53Q12080 455 aaKnown RBP6.07□□□□□ -1.44
RAT1YOR048C SEC65P29478 273 aa6.07□□□□□ -1.44
RAT1YOR048C RMT2Q03305 412 aa6.07□□□□□ -1.44
RAT1YOR048C CDC6P09119 513 aa6.07□□□□□ -1.44
RAT1YOR048C MSH3P25336 1018 aa6.07□□□□□ -1.44
RAT1YOR048C MPE1P35728 441 aaKnown RBP6.07□□□□□ -1.44
RAT1YOR048C RPN1P38764 993 aaKnown RBP6.07□□□□□ -1.44
RAT1YOR048C YKE2P52553 114 aa6.07□□□□□ -1.44
RAT1YOR048C YPL150WQ12152 901 aa6.07□□□□□ -1.44
RAT1YOR048C GYP5Q12344 894 aa6.07□□□□□ -1.44
RAT1YOR048C MGA2P40578 1113 aa6.06□□□□□ -1.44
RAT1YOR048C LSC2P53312 427 aa6.06□□□□□ -1.44
RAT1YOR048C YPL216WQ08964 1102 aa6.06□□□□□ -1.44
RAT1YOR048C RRI2Q12348 645 aa6.06□□□□□ -1.44
RAT1YOR048C ENT1Q12518 454 aa6.06□□□□□ -1.44
RAT1YOR048C REB1P21538 810 aa6.06□□□□□ -1.44
RAT1YOR048C PEP3P27801 918 aa6.06□□□□□ -1.44
RAT1YOR048C AKR1P39010 764 aa6.06□□□□□ -1.44
RAT1YOR048C PSR2Q07949 397 aa6.06□□□□□ -1.44
RAT1YOR048C RPS6AP0CX37 236 aaKnown RBP6.05□□□□□ -1.44
RAT1YOR048C RPS6BP0CX38 236 aaPredicted RBP6.05□□□□□ -1.44
RAT1YOR048C SSF1P38789 453 aaPredicted RBP6.05□□□□□ -1.44
RAT1YOR048C YGL140CP53120 1219 aa6.05□□□□□ -1.44
RAT1YOR048C ALD3P54114 506 aa6.05□□□□□ -1.44
RAT1YOR048C SNU66Q12420 587 aaPredicted RBP6.05□□□□□ -1.44
RAT1YOR048C SHM1P37292 490 aaPredicted RBP6.05□□□□□ -1.44
RAT1YOR048C SPT8P38915 602 aa6.05□□□□□ -1.44
RAT1YOR048C EIS1Q05050 843 aaKnown RBP6.05□□□□□ -1.44
RAT1YOR048C YLR001CQ07895 862 aa6.05□□□□□ -1.44
RAT1YOR048C COBP00163 385 aa6.04□□□□□ -1.44
RAT1YOR048C HXK1P04806 485 aaKnown RBP6.04□□□□□ -1.44
RAT1YOR048C MATALPHA2P0CY08 210 aa6.04□□□□□ -1.44
RAT1YOR048C HMLALPHA2P0CY09 210 aa6.04□□□□□ -1.44
RAT1YOR048C CAF20P12962 161 aaKnown RBP6.04□□□□□ -1.44
RAT1YOR048C CLB1P24868 471 aa6.04□□□□□ -1.44
RAT1YOR048C YOL075CQ08234 1294 aa6.04□□□□□ -1.44
RAT1YOR048C NOP14Q99207 810 aaKnown RBP6.04□□□□□ -1.44
RAT1YOR048C REI1P38344 393 aaPredicted RBP6.04□□□□□ -1.44
RAT1YOR048C IES2P40154 320 aa6.04□□□□□ -1.44
RAT1YOR048C PKH3Q03306 898 aaPredicted RBP6.04□□□□□ -1.44
RAT1YOR048C YLR407WQ06070 228 aa6.04□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 75.6 ms