RNA–Protein interactions for RNA: YOL112W

MSB4, Transcript of GTPase-activating protein of the Ras superfamily, yeast

Gene MSB4, Length 1,479 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSB4	YOL112W	FET4	P40988	552 aa		11.56	□□□□□ -0.56
MSB4	YOL112W	SSA4	P22202	642 aa	Known RBP	11.55	□□□□□ -0.56
MSB4	YOL112W	RTG2	P32608	588 aa	Known RBP	11.55	□□□□□ -0.56
MSB4	YOL112W	VPS4	P52917	437 aa		11.55	□□□□□ -0.56
MSB4	YOL112W	TRM44	Q02648	567 aa	Known RBP	11.55	□□□□□ -0.56
MSB4	YOL112W	PRP42	Q03776	544 aa	Known RBP	11.55	□□□□□ -0.56
MSB4	YOL112W	NCB2	Q92317	146 aa		11.55	□□□□□ -0.56
MSB4	YOL112W	RPT3	P33298	428 aa	Known RBP	11.54	□□□□□ -0.56
MSB4	YOL112W	HAL5	P38970	855 aa	Known RBP	11.54	□□□□□ -0.56
MSB4	YOL112W	GLC3	P32775	704 aa		11.53	□□□□□ -0.56
MSB4	YOL112W	YIR042C	P40586	236 aa		11.53	□□□□□ -0.56
MSB4	YOL112W	RRI2	Q12348	645 aa		11.53	□□□□□ -0.56
MSB4	YOL112W	ARG82	P07250	355 aa		11.52	□□□□□ -0.56
MSB4	YOL112W	BDP1	P46678	594 aa		11.52	□□□□□ -0.56
MSB4	YOL112W	TIM50	Q02776	476 aa		11.52	□□□□□ -0.56
MSB4	YOL112W	WRS1	Q12109	432 aa	Known RBP	11.52	□□□□□ -0.56
MSB4	YOL112W	RPS7A	P26786	190 aa	Known RBP	11.51	□□□□□ -0.57
MSB4	YOL112W	JJJ2	P46997	583 aa		11.51	□□□□□ -0.57
MSB4	YOL112W	YGL242C	P53066	181 aa		11.51	□□□□□ -0.57
MSB4	YOL112W	NOT3	P06102	836 aa	Known RBP	11.51	□□□□□ -0.57
MSB4	YOL112W	PEX21	P50091	288 aa		11.51	□□□□□ -0.57
MSB4	YOL112W	INM2	Q05533	292 aa		11.51	□□□□□ -0.57
MSB4	YOL112W	YFH7	P43591	353 aa		11.5	□□□□□ -0.57
MSB4	YOL112W	ALO1	P54783	526 aa	Known RBP	11.5	□□□□□ -0.57
MSB4	YOL112W	AIM7	Q12156	149 aa		11.5	□□□□□ -0.57
MSB4	YOL112W	TOM1	Q03280	3268 aa		11.5	□□□□□ -0.57
MSB4	YOL112W	HPR1	P17629	752 aa	Known RBP	11.49	□□□□□ -0.57
MSB4	YOL112W	ECM21	P38167	1117 aa	Known RBP	11.49	□□□□□ -0.57
MSB4	YOL112W	FPR3	P38911	411 aa	Known RBP	11.49	□□□□□ -0.57
MSB4	YOL112W	YGR117C	P53270	476 aa		11.49	□□□□□ -0.57
MSB4	YOL112W	CRF1	Q04930	467 aa		11.49	□□□□□ -0.57
MSB4	YOL112W	PDR18	P53756	1333 aa		11.49	□□□□□ -0.57
MSB4	YOL112W	PSF3	Q12146	194 aa		11.48	□□□□□ -0.57
MSB4	YOL112W	PIF1	P07271	859 aa		11.47	□□□□□ -0.57
MSB4	YOL112W	RFC1	P38630	861 aa	Known RBP	11.47	□□□□□ -0.57
MSB4	YOL112W	EMP47	P43555	445 aa		11.47	□□□□□ -0.57
MSB4	YOL112W	MLC1	P53141	149 aa		11.47	□□□□□ -0.57
MSB4	YOL112W	SEN54	Q02825	467 aa	Predicted RBP	11.47	□□□□□ -0.57
MSB4	YOL112W	FLO1	P32768	1537 aa		11.47	□□□□□ -0.57
MSB4	YOL112W	PTK1	P36002	662 aa	Predicted RBP	11.46	□□□□□ -0.57
MSB4	YOL112W	UTP7	P40055	554 aa	Known RBP	11.46	□□□□□ -0.57
MSB4	YOL112W	EPS1	P40557	701 aa		11.46	□□□□□ -0.57
MSB4	YOL112W	SNF3	P10870	884 aa		11.45	□□□□□ -0.58
MSB4	YOL112W	VHR2	P40041	505 aa		11.45	□□□□□ -0.58
MSB4	YOL112W	RMD1	Q03441	430 aa		11.45	□□□□□ -0.58
MSB4	YOL112W	ACK1	Q07622	623 aa	Predicted RBP	11.45	□□□□□ -0.58
MSB4	YOL112W	CDC16	P09798	840 aa		11.44	□□□□□ -0.58
MSB4	YOL112W	MTC3	P53077	123 aa		11.44	□□□□□ -0.58
MSB4	YOL112W	PIB2	P53191	635 aa		11.44	□□□□□ -0.58
MSB4	YOL112W	NKP2	Q06162	153 aa		11.44	□□□□□ -0.58
MSB4	YOL112W	GRX7	P38068	203 aa		11.43	□□□□□ -0.58
MSB4	YOL112W	YJL171C	P46992	396 aa		11.43	□□□□□ -0.58
MSB4	YOL112W	MRPS35	P53292	345 aa		11.43	□□□□□ -0.58
MSB4	YOL112W	PUS6	P53294	404 aa		11.43	□□□□□ -0.58
MSB4	YOL112W	MDL2	P33311	773 aa		11.42	□□□□□ -0.58
MSB4	YOL112W	NSG2	P53898	299 aa		11.42	□□□□□ -0.58
MSB4	YOL112W	CBP1	P07252	654 aa		11.41	□□□□□ -0.58
MSB4	YOL112W	YMR147W	P40218	223 aa	Known RBP	11.41	□□□□□ -0.58
MSB4	YOL112W	PEA2	P40091	420 aa		11.4	□□□□□ -0.58
MSB4	YOL112W	APL6	P46682	809 aa		11.4	□□□□□ -0.58
MSB4	YOL112W	BOI1	P38041	980 aa	Known RBP	11.39	□□□□□ -0.59
MSB4	YOL112W	CYB2	P00175	591 aa		11.38	□□□□□ -0.59
MSB4	YOL112W	PBY1	P38254	753 aa		11.38	□□□□□ -0.59
MSB4	YOL112W	YIL089W	P40500	205 aa		11.38	□□□□□ -0.59
MSB4	YOL112W	ECM16	Q04217	1267 aa	Known RBP	11.38	□□□□□ -0.59
MSB4	YOL112W	BRE1	Q07457	700 aa	Known RBP	11.38	□□□□□ -0.59
MSB4	YOL112W	CWC15	Q03772	175 aa	Known RBP	11.36	□□□□□ -0.59
MSB4	YOL112W	KAR5	Q04746	504 aa		11.36	□□□□□ -0.59
MSB4	YOL112W	KTR1	P27810	393 aa	Known RBP	11.35	□□□□□ -0.59
MSB4	YOL112W	RAD50	P12753	1312 aa		11.35	□□□□□ -0.59
MSB4	YOL112W	LAM4	P38800	1345 aa		11.35	□□□□□ -0.59
MSB4	YOL112W	PNT1	P38969	423 aa		11.34	□□□□□ -0.59
MSB4	YOL112W	BBC1	P47068	1157 aa		11.34	□□□□□ -0.59
MSB4	YOL112W	PIP2	P52960	996 aa		11.34	□□□□□ -0.59
MSB4	YOL112W	NIT1	P40447	199 aa		11.33	□□□□□ -0.6
MSB4	YOL112W	IRC8	P47046	822 aa		11.33	□□□□□ -0.6
MSB4	YOL112W	PKH3	Q03306	898 aa	Predicted RBP	11.33	□□□□□ -0.6
MSB4	YOL112W	OSH3	P38713	996 aa	Known RBP	11.32	□□□□□ -0.6
MSB4	YOL112W	KEL1	P38853	1164 aa	Known RBP	11.32	□□□□□ -0.6
MSB4	YOL112W	RIM20	Q12033	661 aa		11.32	□□□□□ -0.6
MSB4	YOL112W	CSR2	Q12734	1121 aa		11.32	□□□□□ -0.6
MSB4	YOL112W	VAS1	P07806	1104 aa	Known RBP	11.31	□□□□□ -0.6
MSB4	YOL112W	ADP1	P25371	1049 aa		11.31	□□□□□ -0.6
MSB4	YOL112W	GEF1	P37020	779 aa		11.31	□□□□□ -0.6
MSB4	YOL112W	STM1	P39015	273 aa	Known RBP	11.31	□□□□□ -0.6
MSB4	YOL112W	IOC3	P43596	787 aa		11.31	□□□□□ -0.6
MSB4	YOL112W	RAD53	P22216	821 aa		11.3	□□□□□ -0.6
MSB4	YOL112W	NPL4	P33755	580 aa		11.3	□□□□□ -0.6
MSB4	YOL112W	RRD1	P40454	393 aa	Known RBP	11.3	□□□□□ -0.6
MSB4	YOL112W	AAP1	P37898	856 aa	Known RBP	11.29	□□□□□ -0.6
MSB4	YOL112W	BRN1	P38170	754 aa		11.29	□□□□□ -0.6
MSB4	YOL112W	ETP1	P38748	585 aa	Known RBP	11.29	□□□□□ -0.6
MSB4	YOL112W	AAD16	Q02895	342 aa		11.29	□□□□□ -0.6
MSB4	YOL112W	PPM2	Q08282	695 aa		11.29	□□□□□ -0.6
MSB4	YOL112W	TYW1	Q08960	810 aa	Known RBP	11.29	□□□□□ -0.6
MSB4	YOL112W	TAH18	Q12181	623 aa		11.29	□□□□□ -0.6
MSB4	YOL112W	PMA1	P05030	918 aa	Known RBP	11.28	□□□□□ -0.6
MSB4	YOL112W	COQ1	P18900	473 aa		11.28	□□□□□ -0.6
MSB4	YOL112W	YHL050C	P38721	697 aa		11.28	□□□□□ -0.6
MSB4	YOL112W	NOP2	P40991	618 aa	Known RBP	11.28	□□□□□ -0.6

Retrieved 100 of 5,963 RNA–protein pairs in 35.7 ms