RNA–Protein interactions for RNA: YOL031C

SIL1, Transcript of Nucleotide exchange factor for the ER lumenal Hsp70 chaperone Kar2p, yeast

Gene SIL1, Length 1,266 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIL1	YOL031C	ROM1	P53046	1155 aa		4.89	□□□□□ -1.63
SIL1	YOL031C	CWC24	P53769	259 aa		4.89	□□□□□ -1.63
SIL1	YOL031C	MAG2	Q06436	670 aa	Known RBP	4.89	□□□□□ -1.63
SIL1	YOL031C	TSR4	P25040	408 aa		4.88	□□□□□ -1.63
SIL1	YOL031C	VAC17	P25591	423 aa		4.88	□□□□□ -1.63
SIL1	YOL031C	BOL3	P39724	118 aa		4.88	□□□□□ -1.63
SIL1	YOL031C	RTT106	P40161	455 aa		4.88	□□□□□ -1.63
SIL1	YOL031C	NOP2	P40991	618 aa	Known RBP	4.88	□□□□□ -1.63
SIL1	YOL031C	JJJ3	P47138	172 aa		4.88	□□□□□ -1.63
SIL1	YOL031C	LYS5	P50113	272 aa		4.88	□□□□□ -1.63
SIL1	YOL031C	ALD6	P54115	500 aa	Known RBP	4.88	□□□□□ -1.63
SIL1	YOL031C	THI72	Q08579	599 aa		4.88	□□□□□ -1.63
SIL1	YOL031C	OXR1	Q08952	273 aa		4.88	□□□□□ -1.63
SIL1	YOL031C	MNL2	Q12205	849 aa		4.88	□□□□□ -1.63
SIL1	YOL031C	MET4	P32389	672 aa		4.87	□□□□□ -1.63
SIL1	YOL031C	YGL081W	P53156	320 aa		4.87	□□□□□ -1.63
SIL1	YOL031C	APP1	P53933	587 aa		4.87	□□□□□ -1.63
SIL1	YOL031C	UTP14	Q04500	899 aa	Known RBP	4.87	□□□□□ -1.63
SIL1	YOL031C	PIN2	Q12057	282 aa		4.87	□□□□□ -1.63
SIL1	YOL031C	CCP1	P00431	361 aa		4.86	□□□□□ -1.63
SIL1	YOL031C	MRT4	P33201	236 aa	Known RBP	4.86	□□□□□ -1.63
SIL1	YOL031C	RPT1	P33299	467 aa	Known RBP	4.86	□□□□□ -1.63
SIL1	YOL031C	MNR2	P35724	969 aa		4.86	□□□□□ -1.63
SIL1	YOL031C	ALD3	P54114	506 aa		4.86	□□□□□ -1.63
SIL1	YOL031C	UFD2	P54860	961 aa		4.86	□□□□□ -1.63
SIL1	YOL031C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
SIL1	YOL031C	TRS120	Q04183	1289 aa		4.86	□□□□□ -1.63
SIL1	YOL031C	CDC53	Q12018	815 aa	Known RBP	4.86	□□□□□ -1.63
SIL1	YOL031C	FRT1	Q99332	602 aa		4.86	□□□□□ -1.63
SIL1	YOL031C	ROG3	P43602	733 aa		4.85	□□□□□ -1.63
SIL1	YOL031C	NSE3	Q05541	303 aa		4.85	□□□□□ -1.63
SIL1	YOL031C	ESF1	Q06344	628 aa	Known RBP	4.85	□□□□□ -1.63
SIL1	YOL031C	YGR161W-C	Q3E744	92 aa		4.85	□□□□□ -1.63
SIL1	YOL031C	LSO1	Q3E827	93 aa		4.85	□□□□□ -1.63
SIL1	YOL031C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	not detected
SIL1	YOL031C	SAM37	P50110	327 aa		4.84	□□□□□ -1.63
SIL1	YOL031C	ALG12	P53730	551 aa		4.84	□□□□□ -1.63
SIL1	YOL031C	VPS16	Q03308	798 aa		4.84	□□□□□ -1.63
SIL1	YOL031C	TY1A-MR1	Q04215	440 aa		4.84	□□□□□ -1.63
SIL1	YOL031C	UBX5	Q06682	500 aa		4.84	□□□□□ -1.63
SIL1	YOL031C	YPR084W	Q06821	456 aa		4.84	□□□□□ -1.63
SIL1	YOL031C	SSB1	P11484	613 aa	Known RBP	4.83	□□□□□ -1.64
SIL1	YOL031C	PET112	P33893	541 aa		4.83	□□□□□ -1.64
SIL1	YOL031C	VPS35	P34110	944 aa		4.83	□□□□□ -1.64
SIL1	YOL031C	AIM9	P40053	627 aa	Known RBP	4.83	□□□□□ -1.64
SIL1	YOL031C	SSB2	P40150	613 aa	Known RBP	4.83	□□□□□ -1.64
SIL1	YOL031C	RPN4	Q03465	531 aa		4.83	□□□□□ -1.64
SIL1	YOL031C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.83	□□□□□ -1.64	not detected
SIL1	YOL031C	YPR053C	Q6Q5F3	151 aa		4.83	□□□□□ -1.64
SIL1	YOL031C	MET6	P05694	767 aa	Known RBP	4.82	□□□□□ -1.64
SIL1	YOL031C	CIT2	P08679	460 aa		4.82	□□□□□ -1.64
SIL1	YOL031C	NTH2	P35172	780 aa		4.82	□□□□□ -1.64
SIL1	YOL031C	SKN7	P38889	622 aa		4.82	□□□□□ -1.64
SIL1	YOL031C	PHO4	P07270	312 aa	Known RBP	4.81	□□□□□ -1.64
SIL1	YOL031C	CIC1	P38779	376 aa	Known RBP	4.81	□□□□□ -1.64
SIL1	YOL031C	FYV10	P40492	516 aa		4.81	□□□□□ -1.64
SIL1	YOL031C	ISR1	Q06098	443 aa	Known RBP	4.81	□□□□□ -1.64
SIL1	YOL031C	AI1	P03875	834 aa		4.8	□□□□□ -1.64
SIL1	YOL031C	CYT1	P07143	309 aa		4.8	□□□□□ -1.64
SIL1	YOL031C	MCM2	P29469	868 aa		4.8	□□□□□ -1.64
SIL1	YOL031C	RPS26A	P39938	119 aa	Known RBP	4.8	□□□□□ -1.64
SIL1	YOL031C	RPS26B	P39939	119 aa	Known RBP	4.8	□□□□□ -1.64
SIL1	YOL031C	MSH4	P40965	878 aa	Predicted RBP	4.8	□□□□□ -1.64
SIL1	YOL031C	IOC3	P43596	787 aa		4.8	□□□□□ -1.64
SIL1	YOL031C	APL6	P46682	809 aa		4.8	□□□□□ -1.64
SIL1	YOL031C	ATG36	P46983	293 aa		4.8	□□□□□ -1.64
SIL1	YOL031C	UBP2	Q01476	1272 aa		4.8	□□□□□ -1.64
SIL1	YOL031C	SPR28	Q04921	423 aa		4.8	□□□□□ -1.64
SIL1	YOL031C	SSF2	Q12153	453 aa	Predicted RBP	4.8	□□□□□ -1.64
SIL1	YOL031C	UBP1	P25037	809 aa		4.79	□□□□□ -1.64
SIL1	YOL031C	EMW1	P42842	904 aa	Known RBP	4.79	□□□□□ -1.64
SIL1	YOL031C	KRI1	P42846	591 aa	Known RBP	4.79	□□□□□ -1.64
SIL1	YOL031C	DAK2	P43550	591 aa		4.79	□□□□□ -1.64
SIL1	YOL031C	YNL011C	P53980	444 aa		4.79	□□□□□ -1.64
SIL1	YOL031C	HDA3	Q06623	655 aa		4.79	□□□□□ -1.64
SIL1	YOL031C	RPP2B	P02400	110 aa	Known RBP	4.78	□□□□□ -1.64
SIL1	YOL031C	ISC10	P32645	267 aa		4.78	□□□□□ -1.64
SIL1	YOL031C	NGR1	P32831	672 aa	Known RBP	4.78	□□□□□ -1.64
SIL1	YOL031C	TBS1	P38114	1094 aa		4.78	□□□□□ -1.64
SIL1	YOL031C	YBL086C	P38177	466 aa		4.78	□□□□□ -1.64
SIL1	YOL031C	MNN1	P39106	762 aa		4.78	□□□□□ -1.64
SIL1	YOL031C	YGR122W	P53272	402 aa		4.78	□□□□□ -1.64
SIL1	YOL031C	ATG20	Q07528	640 aa		4.78	□□□□□ -1.64
SIL1	YOL031C	NOC3	Q07896	663 aa	Predicted RBP	4.78	□□□□□ -1.64
SIL1	YOL031C	BDS1	Q08347	646 aa		4.78	□□□□□ -1.64
SIL1	YOL031C	ARG82	P07250	355 aa		4.77	□□□□□ -1.65
SIL1	YOL031C	RPS6A	P0CX37	236 aa	Known RBP	4.77	□□□□□ -1.65
SIL1	YOL031C	RPS6B	P0CX38	236 aa	Predicted RBP	4.77	□□□□□ -1.65
SIL1	YOL031C	PRE9	P23638	258 aa	Known RBP	4.77	□□□□□ -1.65
SIL1	YOL031C	SMC1	P32908	1225 aa		4.77	□□□□□ -1.65
SIL1	YOL031C	BOI1	P38041	980 aa	Known RBP	4.77	□□□□□ -1.65
SIL1	YOL031C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.77	□□□□□ -1.65	not detected
SIL1	YOL031C	CHZ1	P40019	153 aa	Predicted RBP	4.77	□□□□□ -1.65
SIL1	YOL031C	MRPS18	P42847	217 aa		4.77	□□□□□ -1.65
SIL1	YOL031C	AAD14	P42884	376 aa		4.77	□□□□□ -1.65
SIL1	YOL031C	LSC2	P53312	427 aa		4.77	□□□□□ -1.65
SIL1	YOL031C	CDC55	Q00362	526 aa		4.77	□□□□□ -1.65
SIL1	YOL031C	DFG5	Q05031	458 aa		4.77	□□□□□ -1.65
SIL1	YOL031C	GRX7	P38068	203 aa		4.76	□□□□□ -1.65
SIL1	YOL031C	YBR197C	P38306	217 aa		4.76	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 98.6 ms