RNA–Protein interactions for RNA: YOL006C

TOP1, Transcript of Topoisomerase I, yeast

Gene TOP1, Length 2,310 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TOP1	YOL006C	PIF1	P07271	859 aa		4.03	□□□□□ -1.76
TOP1	YOL006C	ERR1	P0CX10	437 aa		4.03	□□□□□ -1.76
TOP1	YOL006C	ERR2	P0CX11	437 aa		4.03	□□□□□ -1.76
TOP1	YOL006C	RPL8A	P17076	256 aa	Known RBP	4.03	□□□□□ -1.76
TOP1	YOL006C	PRI2	P20457	528 aa		4.03	□□□□□ -1.76
TOP1	YOL006C	SWI3	P32591	825 aa		4.03	□□□□□ -1.76
TOP1	YOL006C	YKL222C	P35995	705 aa		4.03	□□□□□ -1.76
TOP1	YOL006C	SPF1	P39986	1215 aa	Known RBP	4.03	□□□□□ -1.76
TOP1	YOL006C	YJR120W	P47157	116 aa		4.03	□□□□□ -1.76
TOP1	YOL006C	FLC1	Q08967	793 aa		4.03	□□□□□ -1.76
TOP1	YOL006C	RRI2	Q12348	645 aa		4.03	□□□□□ -1.76
TOP1	YOL006C	TSC13	Q99190	310 aa		4.03	□□□□□ -1.76
TOP1	YOL006C	SFP1	P32432	683 aa		4.03	□□□□□ -1.77
TOP1	YOL006C	FAF1	P40546	346 aa	Predicted RBP	4.03	□□□□□ -1.77
TOP1	YOL006C	FAA4	P47912	694 aa	Known RBP	4.03	□□□□□ -1.77
TOP1	YOL006C	TYW3	P53177	273 aa		4.03	□□□□□ -1.77
TOP1	YOL006C	FOB1	O13329	566 aa		4.02	□□□□□ -1.77
TOP1	YOL006C	CIT1	P00890	479 aa		4.02	□□□□□ -1.77
TOP1	YOL006C	JNM1	P36224	373 aa		4.02	□□□□□ -1.77
TOP1	YOL006C	MUM2	P38236	366 aa		4.02	□□□□□ -1.77
TOP1	YOL006C	NMD3	P38861	518 aa	Known RBP	4.02	□□□□□ -1.77
TOP1	YOL006C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	4.02	□□□□□ -1.77	not detected
TOP1	YOL006C	YGR237C	P50089	785 aa		4.02	□□□□□ -1.77
TOP1	YOL006C	REC8	Q12188	680 aa		4.02	□□□□□ -1.77
TOP1	YOL006C	INH1	P01097	85 aa		4.01	□□□□□ -1.77
TOP1	YOL006C	VPS35	P34110	944 aa		4.01	□□□□□ -1.77
TOP1	YOL006C	RSP5	P39940	809 aa	Known RBP	4.01	□□□□□ -1.77
TOP1	YOL006C	UFD2	P54860	961 aa		4.01	□□□□□ -1.77
TOP1	YOL006C	OPI10	Q08202	246 aa		4.01	□□□□□ -1.77
TOP1	YOL006C	NTG2	Q08214	380 aa		4.01	□□□□□ -1.77
TOP1	YOL006C	HSC82	P15108	705 aa	Known RBP	4.01	□□□□□ -1.77
TOP1	YOL006C	PDI1	P17967	522 aa	Known RBP	4.01	□□□□□ -1.77
TOP1	YOL006C	HSE1	P38753	452 aa		4.01	□□□□□ -1.77
TOP1	YOL006C	UBX4	P54730	416 aa		4.01	□□□□□ -1.77
TOP1	YOL006C	ATG13	Q06628	738 aa		4.01	□□□□□ -1.77
TOP1	YOL006C	FRA1	Q07825	749 aa		4.01	□□□□□ -1.77
TOP1	YOL006C	OXR1	Q08952	273 aa		4.01	□□□□□ -1.77
TOP1	YOL006C	RPP1B	P10622	106 aa	Known RBP	4	□□□□□ -1.77
TOP1	YOL006C	PGI1	P12709	554 aa	Known RBP	4	□□□□□ -1.77
TOP1	YOL006C	YKL069W	P36088	180 aa		4	□□□□□ -1.77
TOP1	YOL006C	SOH1	P38633	127 aa		4	□□□□□ -1.77
TOP1	YOL006C	UTP13	Q05946	817 aa	Known RBP	4	□□□□□ -1.77
TOP1	YOL006C	YRR1	Q12172	810 aa		4	□□□□□ -1.77
TOP1	YOL006C	RTP1	Q12751	981 aa		4	□□□□□ -1.77
TOP1	YOL006C	CDC34	P14682	295 aa		4	□□□□□ -1.77
TOP1	YOL006C	MSH2	P25847	964 aa		4	□□□□□ -1.77
TOP1	YOL006C	SUV3	P32580	737 aa		4	□□□□□ -1.77
TOP1	YOL006C	YHL008C	P38750	627 aa		4	□□□□□ -1.77
TOP1	YOL006C	GPP1	P41277	250 aa	Known RBP	4	□□□□□ -1.77
TOP1	YOL006C	HLJ1	P48353	224 aa		4	□□□□□ -1.77
TOP1	YOL006C	YGR125W	P53273	1036 aa		4	□□□□□ -1.77
TOP1	YOL006C	YNL115C	P53925	644 aa		4	□□□□□ -1.77
TOP1	YOL006C	STE20	Q03497	939 aa	Known RBP	4	□□□□□ -1.77
TOP1	YOL006C	RGA2	Q06407	1009 aa		4	□□□□□ -1.77
TOP1	YOL006C	TFB4	Q12004	338 aa		4	□□□□□ -1.77
TOP1	YOL006C	SRF1	Q12516	437 aa		4	□□□□□ -1.77
TOP1	YOL006C	SSH4	P32343	579 aa		3.99	□□□□□ -1.77
TOP1	YOL006C	MRS6	P32864	603 aa	Known RBP	3.99	□□□□□ -1.77
TOP1	YOL006C	PEA2	P40091	420 aa		3.99	□□□□□ -1.77
TOP1	YOL006C	PUS6	P53294	404 aa		3.99	□□□□□ -1.77
TOP1	YOL006C	VPS5	Q92331	675 aa		3.99	□□□□□ -1.77
TOP1	YOL006C	NUP145	P49687	1317 aa		3.99	□□□□□ -1.77
TOP1	YOL006C	CYT1	P07143	309 aa		3.99	□□□□□ -1.77
TOP1	YOL006C	GGA2	P38817	585 aa	Known RBP	3.99	□□□□□ -1.77
TOP1	YOL006C	APL6	P46682	809 aa		3.99	□□□□□ -1.77
TOP1	YOL006C	PMT3	P47190	753 aa		3.99	□□□□□ -1.77
TOP1	YOL006C	YGR053C	P53234	283 aa		3.99	□□□□□ -1.77
TOP1	YOL006C	ALO1	P54783	526 aa	Known RBP	3.99	□□□□□ -1.77
TOP1	YOL006C	SYH1	Q02875	849 aa	Known RBP	3.99	□□□□□ -1.77
TOP1	YOL006C	SXM1	Q04175	944 aa	Known RBP	3.99	□□□□□ -1.77
TOP1	YOL006C	TOS4	Q06266	489 aa		3.99	□□□□□ -1.77
TOP1	YOL006C	PIB1	Q06651	286 aa		3.99	□□□□□ -1.77
TOP1	YOL006C	CCP1	P00431	361 aa		3.98	□□□□□ -1.77
TOP1	YOL006C	HXK1	P04806	485 aa	Known RBP	3.98	□□□□□ -1.77
TOP1	YOL006C	CAN1	P04817	590 aa		3.98	□□□□□ -1.77
TOP1	YOL006C	SST2	P11972	698 aa	Known RBP	3.98	□□□□□ -1.77
TOP1	YOL006C	RPB10	P22139	70 aa		3.98	□□□□□ -1.77
TOP1	YOL006C	FAA3	P39002	694 aa		3.98	□□□□□ -1.77
TOP1	YOL006C	SPC105	P53148	917 aa		3.98	□□□□□ -1.77
TOP1	YOL006C	NST1	P53935	1240 aa		3.98	□□□□□ -1.77
TOP1	YOL006C	TGL2	P54857	326 aa		3.98	□□□□□ -1.77
TOP1	YOL006C	CDC55	Q00362	526 aa		3.98	□□□□□ -1.77
TOP1	YOL006C	TBF1	Q02457	562 aa		3.98	□□□□□ -1.77
TOP1	YOL006C	TFB2	Q02939	513 aa		3.98	□□□□□ -1.77
TOP1	YOL006C	OSH2	Q12451	1283 aa		3.98	□□□□□ -1.77
TOP1	YOL006C	TEC1	P18412	486 aa		3.98	□□□□□ -1.77
TOP1	YOL006C	TRZ1	P36159	838 aa	Predicted RBP	3.98	□□□□□ -1.77
TOP1	YOL006C	CIC1	P38779	376 aa	Known RBP	3.98	□□□□□ -1.77
TOP1	YOL006C	SRB7	P47822	140 aa		3.98	□□□□□ -1.77
TOP1	YOL006C	ESC2	Q06340	456 aa		3.98	□□□□□ -1.77
TOP1	YOL006C	GRC3	Q07845	632 aa		3.98	□□□□□ -1.77
TOP1	YOL006C	BDS1	Q08347	646 aa		3.98	□□□□□ -1.77
TOP1	YOL006C	TUM1	Q08686	304 aa	Known RBP	3.98	□□□□□ -1.77
TOP1	YOL006C	MPD2	Q99316	277 aa		3.98	□□□□□ -1.77
TOP1	YOL006C	GFD2	P25370	566 aa	Known RBP	3.97	□□□□□ -1.77
TOP1	YOL006C	GUT2	P32191	649 aa		3.97	□□□□□ -1.77
TOP1	YOL006C	ILV3	P39522	585 aa	Known RBP	3.97	□□□□□ -1.77
TOP1	YOL006C	MTR4	P47047	1073 aa	Known RBP	3.97	□□□□□ -1.77
TOP1	YOL006C	PEX21	P50091	288 aa		3.97	□□□□□ -1.77
TOP1	YOL006C	CWH41	P53008	833 aa		3.97	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms