RNA–Protein interactions for RNA: YMR022W

UBC7, Transcript of Ubiquitin conjugating enzyme, yeast

Gene UBC7, Length 498 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC7	YMR022W	MCX1	P38323	520 aa	Predicted RBP	4.66	□□□□□ -1.66
UBC7	YMR022W	DYS1	P38791	387 aa		4.66	□□□□□ -1.66
UBC7	YMR022W	TAT1	P38085	619 aa		4.65	□□□□□ -1.67
UBC7	YMR022W	YFL066C	P43538	392 aa		4.65	□□□□□ -1.67
UBC7	YMR022W	CUS1	Q02554	436 aa	Predicted RBP	4.65	□□□□□ -1.67
UBC7	YMR022W	NHA1	Q99271	985 aa		4.65	□□□□□ -1.67
UBC7	YMR022W	QDR2	P40474	542 aa		4.64	□□□□□ -1.67
UBC7	YMR022W	SKP1	P52286	194 aa		4.64	□□□□□ -1.67
UBC7	YMR022W	FOX2	Q02207	900 aa	Known RBP	4.64	□□□□□ -1.67
UBC7	YMR022W	PUN1	Q06991	263 aa		4.64	□□□□□ -1.67
UBC7	YMR022W	RRN6	P32786	894 aa		4.63	□□□□□ -1.67
UBC7	YMR022W	LDH1	P38139	375 aa		4.63	□□□□□ -1.67
UBC7	YMR022W	ALG14	P38242	237 aa		4.63	□□□□□ -1.67
UBC7	YMR022W	HXT5	P38695	592 aa		4.63	□□□□□ -1.67
UBC7	YMR022W	SKN7	P38889	622 aa		4.63	□□□□□ -1.67
UBC7	YMR022W	FIR1	P40020	876 aa		4.63	□□□□□ -1.67
UBC7	YMR022W	RSC2	Q06488	889 aa		4.63	□□□□□ -1.67
UBC7	YMR022W	CCT8	P47079	568 aa	Known RBP	4.62	□□□□□ -1.67
UBC7	YMR022W	SRS2	P12954	1174 aa		4.61	□□□□□ -1.67
UBC7	YMR022W	MRPL33	P20084	86 aa		4.61	□□□□□ -1.67
UBC7	YMR022W	TPS3	P38426	1054 aa	Known RBP	4.61	□□□□□ -1.67
UBC7	YMR022W	MSC7	P38694	644 aa		4.61	□□□□□ -1.67
UBC7	YMR022W	ALD4	P46367	519 aa	Known RBP	4.61	□□□□□ -1.67
UBC7	YMR022W	RPC31	P17890	251 aa		4.6	□□□□□ -1.67
UBC7	YMR022W	PUP1	P25043	261 aa		4.6	□□□□□ -1.67
UBC7	YMR022W	PGM2	P37012	569 aa	Known RBP	4.6	□□□□□ -1.67
UBC7	YMR022W	ISW1	P38144	1129 aa		4.6	□□□□□ -1.67
UBC7	YMR022W	GIP1	P38229	639 aa		4.6	□□□□□ -1.67
UBC7	YMR022W	CAB1	Q04430	367 aa		4.6	□□□□□ -1.67
UBC7	YMR022W	RLF2	Q12495	606 aa		4.6	□□□□□ -1.67
UBC7	YMR022W	VMA3	P25515	160 aa		4.59	□□□□□ -1.67
UBC7	YMR022W	YOR296W	Q08748	1289 aa		4.59	□□□□□ -1.67
UBC7	YMR022W	SLP1	Q12232	587 aa		4.59	□□□□□ -1.67
UBC7	YMR022W	ISC10	P32645	267 aa		4.58	□□□□□ -1.68
UBC7	YMR022W	PRK1	P40494	810 aa		4.58	□□□□□ -1.68
UBC7	YMR022W	RPL34A	P87262	121 aa	Predicted RBP	4.58	□□□□□ -1.68
UBC7	YMR022W	YBR197C	P38306	217 aa		4.57	□□□□□ -1.68
UBC7	YMR022W	YDR215C	Q12240	137 aa		4.57	□□□□□ -1.68
UBC7	YMR022W	FUR4	P05316	633 aa	Known RBP	4.56	□□□□□ -1.68
UBC7	YMR022W	YER156C	P40093	338 aa	Known RBP	4.56	□□□□□ -1.68
UBC7	YMR022W	LSB6	P42951	607 aa		4.56	□□□□□ -1.68
UBC7	YMR022W	GIS4	Q04233	774 aa		4.56	□□□□□ -1.68
UBC7	YMR022W	SUV3	P32580	737 aa		4.55	□□□□□ -1.68
UBC7	YMR022W	PNP1	Q05788	311 aa		4.55	□□□□□ -1.68
UBC7	YMR022W	NAR1	P23503	491 aa	Known RBP	4.54	□□□□□ -1.68
UBC7	YMR022W	RRM3	P38766	723 aa		4.54	□□□□□ -1.68
UBC7	YMR022W	SLN1	P39928	1220 aa	Predicted RBP	4.54	□□□□□ -1.68
UBC7	YMR022W	HXT8	P40886	569 aa		4.54	□□□□□ -1.68
UBC7	YMR022W	PRY1	P47032	299 aa		4.54	□□□□□ -1.68
UBC7	YMR022W	YNR040W	P53736	256 aa		4.54	□□□□□ -1.68
UBC7	YMR022W	IDI1	P15496	288 aa		4.53	□□□□□ -1.68
UBC7	YMR022W	YCK2	P23292	546 aa	Known RBP	4.53	□□□□□ -1.68
UBC7	YMR022W	LEM3	P42838	414 aa		4.53	□□□□□ -1.68
UBC7	YMR022W	ITC1	P53125	1264 aa		4.53	□□□□□ -1.68
UBC7	YMR022W	DSE4	P53753	1117 aa		4.53	□□□□□ -1.68
UBC7	YMR022W	GLT1	Q12680	2145 aa	Known RBP	4.53	□□□□□ -1.68
UBC7	YMR022W	SAC7	P17121	654 aa		4.52	□□□□□ -1.69
UBC7	YMR022W	RSC6	P25632	483 aa		4.52	□□□□□ -1.69
UBC7	YMR022W	COQ2	P32378	372 aa		4.52	□□□□□ -1.69
UBC7	YMR022W	SFA1	P32771	386 aa		4.52	□□□□□ -1.69
UBC7	YMR022W	SMC1	P32908	1225 aa		4.52	□□□□□ -1.69
UBC7	YMR022W	MAC1	P35192	417 aa		4.52	□□□□□ -1.69
UBC7	YMR022W	AMN1	P38285	549 aa	Predicted RBP	4.52	□□□□□ -1.69
UBC7	YMR022W	BSD2	P38356	321 aa		4.52	□□□□□ -1.69
UBC7	YMR022W	AIM46	P38885	310 aa		4.52	□□□□□ -1.69
UBC7	YMR022W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.52	□□□□□ -1.69	not detected
UBC7	YMR022W	CWC15	Q03772	175 aa	Known RBP	4.52	□□□□□ -1.69
UBC7	YMR022W	MCA1	Q08601	432 aa		4.52	□□□□□ -1.69
UBC7	YMR022W	MSN1	P22148	382 aa		4.51	□□□□□ -1.69
UBC7	YMR022W	YIL165C	P40446	119 aa		4.51	□□□□□ -1.69
UBC7	YMR022W	YJL181W	P46987	611 aa		4.51	□□□□□ -1.69
UBC7	YMR022W	SUT1	P53032	299 aa	Known RBP	4.51	□□□□□ -1.69
UBC7	YMR022W	PPT1	P53043	513 aa		4.51	□□□□□ -1.69
UBC7	YMR022W	BUD9	P53226	547 aa		4.51	□□□□□ -1.69
UBC7	YMR022W	YPL034W	Q03083	165 aa		4.51	□□□□□ -1.69
UBC7	YMR022W	NOB1	Q08444	459 aa	Known RBP	4.51	□□□□□ -1.69
UBC7	YMR022W	AI3	P03877	415 aa		4.5	□□□□□ -1.69
UBC7	YMR022W	GIP2	P40036	548 aa		4.5	□□□□□ -1.69
UBC7	YMR022W	YML083C	Q04526	418 aa		4.5	□□□□□ -1.69
UBC7	YMR022W	RAD55	P38953	406 aa		4.49	□□□□□ -1.69
UBC7	YMR022W	ARI1	P53111	347 aa	Known RBP	4.49	□□□□□ -1.69
UBC7	YMR022W	GUP1	P53154	560 aa		4.49	□□□□□ -1.69
UBC7	YMR022W	ECM2	P38241	364 aa	Known RBP	4.48	□□□□□ -1.69
UBC7	YMR022W	SOK2	P53438	785 aa	Predicted RBP	4.48	□□□□□ -1.69
UBC7	YMR022W	SUB2	Q07478	446 aa	Known RBP	4.48	□□□□□ -1.69
UBC7	YMR022W	TY4B-P	A0A0B7P3V8	1104 aa		4.47	□□□□□ -1.69
UBC7	YMR022W	NTA1	P40354	457 aa		4.47	□□□□□ -1.69
UBC7	YMR022W	TED1	P40533	473 aa		4.47	□□□□□ -1.69
UBC7	YMR022W	INP51	P40559	946 aa	Known RBP	4.47	□□□□□ -1.69
UBC7	YMR022W	TY4A-H	Q6Q5P6	413 aa		4.47	□□□□□ -1.69
UBC7	YMR022W	CHS2	P14180	963 aa		4.46	□□□□□ -1.7
UBC7	YMR022W	IRS4	P36115	615 aa	Known RBP	4.46	□□□□□ -1.7
UBC7	YMR022W	KAE1	P36132	386 aa		4.46	□□□□□ -1.7
UBC7	YMR022W	SPO71	Q03868	1245 aa		4.46	□□□□□ -1.7
UBC7	YMR022W	KAR5	Q04746	504 aa		4.46	□□□□□ -1.7
UBC7	YMR022W	EMG1	Q06287	252 aa	Known RBP	4.46	□□□□□ -1.7
UBC7	YMR022W	FUS1	P11710	512 aa		4.45	□□□□□ -1.7
UBC7	YMR022W	MAE1	P36013	669 aa	Known RBP	4.45	□□□□□ -1.7
UBC7	YMR022W	OMA1	P36163	345 aa		4.45	□□□□□ -1.7
UBC7	YMR022W	LSO1	Q3E827	93 aa		4.45	□□□□□ -1.7

Retrieved 100 of 5,963 RNA–protein pairs in 69.5 ms