RNA–Protein interactions for RNA: YMR012W

CLU1, Transcript of Subunit of the eukaryotic translation initiation factor 3 (eIF3), yeast

Gene CLU1, Length 3,834 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CLU1	YMR012W	YOL036W	Q08206	761 aa		1.95	□□□□□ -2.1
CLU1	YMR012W	GSC2	P40989	1895 aa		1.95	□□□□□ -2.1
CLU1	YMR012W	TRP5	P00931	707 aa	Known RBP	1.95	□□□□□ -2.1
CLU1	YMR012W	MDJ2	P42834	146 aa		1.95	□□□□□ -2.1
CLU1	YMR012W	TUB4	P53378	473 aa		1.95	□□□□□ -2.1
CLU1	YMR012W	ZDS2	P54786	942 aa		1.95	□□□□□ -2.1
CLU1	YMR012W	HPC2	Q01448	625 aa		1.95	□□□□□ -2.1
CLU1	YMR012W	GDE1	Q02979	1223 aa		1.95	□□□□□ -2.1
CLU1	YMR012W	YLR419W	Q06698	1435 aa	Known RBP	1.94	□□□□□ -2.1
CLU1	YMR012W	THI4	P32318	326 aa		1.94	□□□□□ -2.1
CLU1	YMR012W	ALO1	P54783	526 aa	Known RBP	1.94	□□□□□ -2.1
CLU1	YMR012W	PEX29	Q03370	554 aa		1.94	□□□□□ -2.1
CLU1	YMR012W	TOS4	Q06266	489 aa		1.94	□□□□□ -2.1
CLU1	YMR012W	MNL2	Q12205	849 aa		1.94	□□□□□ -2.1
CLU1	YMR012W	TIF6	Q12522	245 aa	Known RBP	1.94	□□□□□ -2.1
CLU1	YMR012W	UGA4	P32837	571 aa		1.94	□□□□□ -2.1
CLU1	YMR012W	ABZ1	P37254	787 aa	Predicted RBP	1.94	□□□□□ -2.1
CLU1	YMR012W	SAP155	P43612	1002 aa		1.94	□□□□□ -2.1
CLU1	YMR012W	CTH1	P47976	325 aa		1.94	□□□□□ -2.1
CLU1	YMR012W	ACS2	P52910	683 aa	Known RBP	1.94	□□□□□ -2.1
CLU1	YMR012W	YDR344C	Q05510	147 aa		1.94	□□□□□ -2.1
CLU1	YMR012W	UBX5	Q06682	500 aa		1.94	□□□□□ -2.1
CLU1	YMR012W	SIT4	P20604	311 aa		1.94	□□□□□ -2.1
CLU1	YMR012W	TOM20	P35180	183 aa		1.94	□□□□□ -2.1
CLU1	YMR012W	YFL040W	P43562	540 aa		1.94	□□□□□ -2.1
CLU1	YMR012W	YJR142W	P47173	342 aa		1.94	□□□□□ -2.1
CLU1	YMR012W	ELP4	Q02884	456 aa	Known RBP	1.94	□□□□□ -2.1
CLU1	YMR012W	ENT2	Q05785	613 aa		1.94	□□□□□ -2.1
CLU1	YMR012W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	1.94	□□□□□ -2.1	not detected
CLU1	YMR012W	SAM3	Q08986	587 aa		1.94	□□□□□ -2.1
CLU1	YMR012W	NYV1	Q12255	253 aa		1.94	□□□□□ -2.1
CLU1	YMR012W	MPD2	Q99316	277 aa		1.94	□□□□□ -2.1
CLU1	YMR012W	DAS1	P47005	663 aa		1.93	□□□□□ -2.1
CLU1	YMR012W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	1.93	□□□□□ -2.1	not detected
CLU1	YMR012W	YVH1	Q02256	364 aa	Known RBP	1.93	□□□□□ -2.1
CLU1	YMR012W	NUT2	Q06213	157 aa		1.93	□□□□□ -2.1
CLU1	YMR012W	BDS1	Q08347	646 aa		1.93	□□□□□ -2.1
CLU1	YMR012W	YOR131C	Q12486	218 aa		1.93	□□□□□ -2.1
CLU1	YMR012W	SRM1	P21827	482 aa		1.93	□□□□□ -2.1
CLU1	YMR012W	YKL069W	P36088	180 aa		1.93	□□□□□ -2.1
CLU1	YMR012W	PRE3	P38624	215 aa		1.93	□□□□□ -2.1
CLU1	YMR012W	NIT1	P40447	199 aa		1.93	□□□□□ -2.1
CLU1	YMR012W	MVP1	P40959	511 aa	Known RBP	1.93	□□□□□ -2.1
CLU1	YMR012W	FAA4	P47912	694 aa	Known RBP	1.93	□□□□□ -2.1
CLU1	YMR012W	YDL129W	Q07555	291 aa		1.93	□□□□□ -2.1
CLU1	YMR012W	SOL3	P38858	249 aa		1.93	□□□□□ -2.1
CLU1	YMR012W	YOL098C	Q12496	1037 aa		1.93	□□□□□ -2.1
CLU1	YMR012W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	1.92	□□□□□ -2.1	not detected
CLU1	YMR012W	YAP1801	P38856	637 aa		1.92	□□□□□ -2.1
CLU1	YMR012W	XDJ1	P39102	459 aa		1.92	□□□□□ -2.1
CLU1	YMR012W	UTP7	P40055	554 aa	Known RBP	1.92	□□□□□ -2.1
CLU1	YMR012W	ZDS1	P50111	915 aa	Known RBP	1.92	□□□□□ -2.1
CLU1	YMR012W	YNR063W	P53749	607 aa		1.92	□□□□□ -2.1
CLU1	YMR012W	DNM1	P54861	757 aa		1.92	□□□□□ -2.1
CLU1	YMR012W	MAK21	Q12176	1025 aa	Known RBP	1.92	□□□□□ -2.1
CLU1	YMR012W	YGR161W-C	Q3E744	92 aa		1.92	□□□□□ -2.1
CLU1	YMR012W	RDS2	P19541	446 aa	Known RBP	1.92	□□□□□ -2.1
CLU1	YMR012W	GRX1	P25373	110 aa	Known RBP	1.92	□□□□□ -2.1
CLU1	YMR012W	ISC10	P32645	267 aa		1.92	□□□□□ -2.1
CLU1	YMR012W	MGE1	P38523	228 aa		1.92	□□□□□ -2.1
CLU1	YMR012W	ALG12	P53730	551 aa		1.92	□□□□□ -2.1
CLU1	YMR012W	CTT1	P06115	562 aa		1.92	□□□□□ -2.1
CLU1	YMR012W	DAT1	P13483	248 aa	Known RBP	1.92	□□□□□ -2.1
CLU1	YMR012W	RAD4	P14736	754 aa		1.92	□□□□□ -2.1
CLU1	YMR012W	YBR284W	P38150	797 aa		1.92	□□□□□ -2.1
CLU1	YMR012W	MAL31	P38156	614 aa		1.92	□□□□□ -2.1
CLU1	YMR012W	NUP82	P40368	713 aa		1.92	□□□□□ -2.1
CLU1	YMR012W	MCM16	Q12262	181 aa		1.92	□□□□□ -2.1
CLU1	YMR012W	GAL2	P13181	574 aa		1.91	□□□□□ -2.1
CLU1	YMR012W	PRP40	P33203	583 aa	Known RBP	1.91	□□□□□ -2.1
CLU1	YMR012W	MPE1	P35728	441 aa	Known RBP	1.91	□□□□□ -2.1
CLU1	YMR012W	YGR273C	P53329	174 aa		1.91	□□□□□ -2.1
CLU1	YMR012W	ISR1	Q06098	443 aa	Known RBP	1.91	□□□□□ -2.1
CLU1	YMR012W	DLD1	P32891	587 aa		1.91	□□□□□ -2.1
CLU1	YMR012W	BSD2	P38356	321 aa		1.91	□□□□□ -2.1
CLU1	YMR012W	RSC30	P38781	883 aa		1.91	□□□□□ -2.1
CLU1	YMR012W	HAL5	P38970	855 aa	Known RBP	1.91	□□□□□ -2.1
CLU1	YMR012W	SND1	Q04007	877 aa		1.91	□□□□□ -2.1
CLU1	YMR012W	BOI1	P38041	980 aa	Known RBP	1.9	□□□□□ -2.1
CLU1	YMR012W	SAP30	P38429	201 aa		1.9	□□□□□ -2.1
CLU1	YMR012W	SUP45	P12385	437 aa	Known RBP	1.9	□□□□□ -2.11
CLU1	YMR012W	TRX2	P22803	104 aa	Known RBP	1.9	□□□□□ -2.11
CLU1	YMR012W	TDA5	Q06417	326 aa	Known RBP	1.9	□□□□□ -2.11
CLU1	YMR012W	HIM1	Q06674	414 aa		1.9	□□□□□ -2.11
CLU1	YMR012W	FAL1	Q12099	399 aa	Known RBP	1.9	□□□□□ -2.11
CLU1	YMR012W	SIR4	P11978	1358 aa		1.9	□□□□□ -2.11
CLU1	YMR012W	HTA1	P04911	132 aa	Known RBP	1.9	□□□□□ -2.11
CLU1	YMR012W	HTA2	P04912	132 aa		1.9	□□□□□ -2.11
CLU1	YMR012W	ABD1	P32783	436 aa	Predicted RBP	1.9	□□□□□ -2.11
CLU1	YMR012W	SLI15	P38283	698 aa		1.9	□□□□□ -2.11
CLU1	YMR012W	CRP1	P38845	465 aa	Known RBP	1.9	□□□□□ -2.11
CLU1	YMR012W	STM1	P39015	273 aa	Known RBP	1.9	□□□□□ -2.11
CLU1	YMR012W	DAN4	P47179	1161 aa		1.9	□□□□□ -2.11
CLU1	YMR012W	CLA4	P48562	842 aa		1.9	□□□□□ -2.11
CLU1	YMR012W	FMP30	Q02883	468 aa		1.9	□□□□□ -2.11
CLU1	YMR012W	PML39	Q03760	334 aa		1.9	□□□□□ -2.11
CLU1	YMR012W	YLR225C	Q05948	407 aa	Known RBP	1.9	□□□□□ -2.11
CLU1	YMR012W	MHP1	P43638	1398 aa		1.89	□□□□□ -2.11
CLU1	YMR012W	ERP2	P39704	215 aa		1.89	□□□□□ -2.11
CLU1	YMR012W	YJL181W	P46987	611 aa		1.89	□□□□□ -2.11

Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms