RNA–Protein interactions for RNA: YLR417W

VPS36, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS36, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS36YLR417W MAG2Q06436 670 aaKnown RBP7.08□□□□□ -1.28
VPS36YLR417W MLF3P32047 452 aa7.07□□□□□ -1.28
VPS36YLR417W RAD55P38953 406 aa7.07□□□□□ -1.28
VPS36YLR417W FIR1P40020 876 aa7.07□□□□□ -1.28
VPS36YLR417W NTA1P40354 457 aa7.07□□□□□ -1.28
VPS36YLR417W MSB3P48566 633 aaPredicted RBP7.07□□□□□ -1.28
VPS36YLR417W SPR28Q04921 423 aa7.07□□□□□ -1.28
VPS36YLR417W NOC3Q07896 663 aaPredicted RBP7.07□□□□□ -1.28
VPS36YLR417W ARG82P07250 355 aa7.07□□□□□ -1.28
VPS36YLR417W QDR2P40474 542 aa7.07□□□□□ -1.28
VPS36YLR417W BSC2Q05611 235 aa7.07□□□□□ -1.28
VPS36YLR417W MSN1P22148 382 aa7.06□□□□□ -1.28
VPS36YLR417W JJJ2P46997 583 aa7.06□□□□□ -1.28
VPS36YLR417W YGR122WP53272 402 aa7.06□□□□□ -1.28
VPS36YLR417W CDC4P07834 779 aa7.05□□□□□ -1.28
VPS36YLR417W YBR287WP38355 427 aa7.05□□□□□ -1.28
VPS36YLR417W YTA6P40328 754 aa7.05□□□□□ -1.28
VPS36YLR417W AAD14P42884 376 aa7.05□□□□□ -1.28
VPS36YLR417W CLA4P48562 842 aa7.05□□□□□ -1.28
VPS36YLR417W AFT1P22149 690 aa7.04□□□□□ -1.28
VPS36YLR417W KAP122P32767 1081 aa7.04□□□□□ -1.28
VPS36YLR417W IRS4P36115 615 aaKnown RBP7.04□□□□□ -1.28
VPS36YLR417W RPS26AP39938 119 aaKnown RBP7.04□□□□□ -1.28
VPS36YLR417W RPS26BP39939 119 aaKnown RBP7.04□□□□□ -1.28
VPS36YLR417W RGD2P43556 714 aa7.04□□□□□ -1.28
VPS36YLR417W ESF1Q06344 628 aaKnown RBP7.04□□□□□ -1.28
VPS36YLR417W CLN2P20438 545 aa7.04□□□□□ -1.28
VPS36YLR417W PEP7P32609 515 aa7.04□□□□□ -1.28
VPS36YLR417W MAD1P40957 749 aa7.04□□□□□ -1.28
VPS36YLR417W HST3P53687 447 aa7.04□□□□□ -1.28
VPS36YLR417W RPS31P05759 152 aaKnown RBP7.03□□□□□ -1.28
VPS36YLR417W CYC8P14922 966 aa7.03□□□□□ -1.28
VPS36YLR417W PSY2P40164 858 aa7.03□□□□□ -1.28
VPS36YLR417W PIN2Q12057 282 aa7.03□□□□□ -1.28
VPS36YLR417W IRE1P32361 1115 aa7.02□□□□□ -1.29
VPS36YLR417W ASH1P34233 588 aa7.02□□□□□ -1.29
VPS36YLR417W AHP1P38013 176 aaKnown RBP7.02□□□□□ -1.29
VPS36YLR417W ISW1P38144 1129 aa7.02□□□□□ -1.29
VPS36YLR417W VPS16Q03308 798 aa7.02□□□□□ -1.29
VPS36YLR417W TIF6Q12522 245 aaKnown RBP7.02□□□□□ -1.29
VPS36YLR417W SHM1P37292 490 aaPredicted RBP7.01□□□□□ -1.29
VPS36YLR417W FPR4Q06205 392 aaPredicted RBP7.01□□□□□ -1.29
VPS36YLR417W HXK1P04806 485 aaKnown RBP7.01□□□□□ -1.29
VPS36YLR417W DAL1P32375 460 aa7.01□□□□□ -1.29
VPS36YLR417W MNR2P35724 969 aa7.01□□□□□ -1.29
VPS36YLR417W GIP1P38229 639 aa7.01□□□□□ -1.29
VPS36YLR417W RGA1P39083 1007 aa7.01□□□□□ -1.29
VPS36YLR417W RAS1P01119 309 aa7□□□□□ -1.29
VPS36YLR417W RAD2P07276 1031 aa7□□□□□ -1.29
VPS36YLR417W RPC31P17890 251 aa7□□□□□ -1.29
VPS36YLR417W VTC4P47075 721 aa7□□□□□ -1.29
VPS36YLR417W ALD6P54115 500 aaKnown RBP7□□□□□ -1.29
VPS36YLR417W INP54Q08227 384 aaKnown RBP7□□□□□ -1.29
VPS36YLR417W YOR296WQ08748 1289 aa7□□□□□ -1.29
VPS36YLR417W SLA1P32790 1244 aa6.99□□□□□ -1.29
VPS36YLR417W MTO1P53070 669 aa6.99□□□□□ -1.29
VPS36YLR417W ALD3P54114 506 aa6.99□□□□□ -1.29
VPS36YLR417W YCS4Q06156 1176 aa6.99□□□□□ -1.29
VPS36YLR417W TOS4Q06266 489 aa6.99□□□□□ -1.29
VPS36YLR417W YHL008CP38750 627 aa6.98□□□□□ -1.29
VPS36YLR417W VAC8P39968 578 aa6.98□□□□□ -1.29
VPS36YLR417W FLP1P03870 423 aa6.98□□□□□ -1.29
VPS36YLR417W PET112P33893 541 aa6.98□□□□□ -1.29
VPS36YLR417W AIR1P40507 360 aaKnown RBP6.98□□□□□ -1.29
VPS36YLR417W PTK2P47116 818 aaKnown RBP6.98□□□□□ -1.29
VPS36YLR417W TY1A-DR3Q12441 440 aa6.98□□□□□ -1.29
VPS36YLR417W YOL098CQ12496 1037 aa6.98□□□□□ -1.29
VPS36YLR417W SRF1Q12516 437 aa6.98□□□□□ -1.29
VPS36YLR417W LEU1P07264 779 aaKnown RBP6.97□□□□□ -1.29
VPS36YLR417W BSD2P38356 321 aa6.97□□□□□ -1.29
VPS36YLR417W FAA3P39002 694 aa6.97□□□□□ -1.29
VPS36YLR417W MRPS18P42847 217 aa6.97□□□□□ -1.29
VPS36YLR417W DAL4Q04895 635 aa6.97□□□□□ -1.29
VPS36YLR417W MCD1Q12158 566 aa6.97□□□□□ -1.29
VPS36YLR417W PDC6P26263 563 aaKnown RBP6.96□□□□□ -1.29
VPS36YLR417W AIM46P38885 310 aa6.96□□□□□ -1.29
VPS36YLR417W PSH1Q12161 406 aa6.96□□□□□ -1.29
VPS36YLR417W KAR2P16474 682 aaKnown RBP6.96□□□□□ -1.3
VPS36YLR417W DLD1P32891 587 aa6.96□□□□□ -1.3
VPS36YLR417W PRP40P33203 583 aaKnown RBP6.96□□□□□ -1.3
VPS36YLR417W NAB2P32505 525 aaKnown RBP RIP-Chip data6.95□□□□□ -1.3not detected
VPS36YLR417W NUP85P46673 744 aa6.95□□□□□ -1.3
VPS36YLR417W SKP1P52286 194 aa6.95□□□□□ -1.3
VPS36YLR417W PRE9P23638 258 aaKnown RBP6.94□□□□□ -1.3
VPS36YLR417W YJR115WP47152 169 aa6.94□□□□□ -1.3
VPS36YLR417W EMG1Q06287 252 aaKnown RBP6.94□□□□□ -1.3
VPS36YLR417W WRS1Q12109 432 aaKnown RBP6.94□□□□□ -1.3
VPS36YLR417W YJL049WP47048 450 aa6.93□□□□□ -1.3
VPS36YLR417W YJR098CP47139 656 aa6.93□□□□□ -1.3
VPS36YLR417W LSC2P53312 427 aa6.93□□□□□ -1.3
VPS36YLR417W CTR9P89105 1077 aa6.93□□□□□ -1.3
VPS36YLR417W ECM2P38241 364 aaKnown RBP6.93□□□□□ -1.3
VPS36YLR417W CUS1Q02554 436 aaPredicted RBP6.93□□□□□ -1.3
VPS36YLR417W RGP1P16664 663 aa6.92□□□□□ -1.3
VPS36YLR417W CWC24P53769 259 aa6.92□□□□□ -1.3
VPS36YLR417W YPL109CQ02981 657 aa6.92□□□□□ -1.3
VPS36YLR417W MSH6Q03834 1242 aa6.92□□□□□ -1.3
VPS36YLR417W SSF2Q12153 453 aaPredicted RBP6.92□□□□□ -1.3
VPS36YLR417W YIL165CP40446 119 aa6.91□□□□□ -1.3
VPS36YLR417W NUT1P53114 1132 aa6.91□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 73 ms