RNA–Protein interactions for RNA: YLR208W

SEC13, Transcript of Structural component of 3 distinct complexes, yeastyeast

Gene SEC13, Length 894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC13YLR208W DCW1P36091 449 aa7.03□□□□□ -1.28
SEC13YLR208W BRL1P38770 471 aa7.03□□□□□ -1.28
SEC13YLR208W VPS70P47161 811 aa7.03□□□□□ -1.28
SEC13YLR208W KCC4P25389 1037 aa7.02□□□□□ -1.29
SEC13YLR208W AKL1P38080 1108 aaKnown RBP7.02□□□□□ -1.29
SEC13YLR208W AOS1Q06624 347 aa7.02□□□□□ -1.29
SEC13YLR208W SSP2Q08646 371 aa7.02□□□□□ -1.29
SEC13YLR208W TRP5P00931 707 aaKnown RBP7.01□□□□□ -1.29
SEC13YLR208W SCT1P32784 759 aa7.01□□□□□ -1.29
SEC13YLR208W YNR021WP53723 404 aaKnown RBP7.01□□□□□ -1.29
SEC13YLR208W HKR1P41809 1802 aa7□□□□□ -1.29
SEC13YLR208W KAR2P16474 682 aaKnown RBP7□□□□□ -1.29
SEC13YLR208W APL2P36000 726 aaPredicted RBP7□□□□□ -1.29
SEC13YLR208W RSC30P38781 883 aa7□□□□□ -1.29
SEC13YLR208W RRT6P53117 311 aaPredicted RBP7□□□□□ -1.29
SEC13YLR208W IOC2Q12072 812 aa7□□□□□ -1.29
SEC13YLR208W FLO11P08640 1367 aa6.99□□□□□ -1.29
SEC13YLR208W YPR148CQ06523 435 aa6.99□□□□□ -1.29
SEC13YLR208W YPR204WQ08995 1032 aa6.99□□□□□ -1.29
SEC13YLR208W HAT1Q12341 374 aa6.99□□□□□ -1.29
SEC13YLR208W SSK22P25390 1331 aaPredicted RBP6.99□□□□□ -1.29
SEC13YLR208W NTH2P35172 780 aa6.98□□□□□ -1.29
SEC13YLR208W RRG1Q12167 365 aaPredicted RBP6.98□□□□□ -1.29
SEC13YLR208W MLP1Q02455 1875 aaKnown RBP6.98□□□□□ -1.29
SEC13YLR208W CBP1P07252 654 aa6.97□□□□□ -1.29
SEC13YLR208W RBA50Q04418 439 aa6.97□□□□□ -1.29
SEC13YLR208W CRF1Q04930 467 aa6.97□□□□□ -1.29
SEC13YLR208W LDB19Q12502 818 aa6.97□□□□□ -1.29
SEC13YLR208W SLD2P34252 453 aa6.96□□□□□ -1.3
SEC13YLR208W JIP4Q03361 876 aa6.96□□□□□ -1.3
SEC13YLR208W FBP1P09201 348 aa6.95□□□□□ -1.3
SEC13YLR208W DSF2P38213 736 aa6.95□□□□□ -1.3
SEC13YLR208W YEL023CP39992 682 aa6.95□□□□□ -1.3
SEC13YLR208W YNL035CP53962 389 aaKnown RBP6.95□□□□□ -1.3
SEC13YLR208W DLD1P32891 587 aa6.94□□□□□ -1.3
SEC13YLR208W ASH1P34233 588 aa6.94□□□□□ -1.3
SEC13YLR208W PTC4P38089 393 aa6.94□□□□□ -1.3
SEC13YLR208W UTP7P40055 554 aaKnown RBP6.94□□□□□ -1.3
SEC13YLR208W PAP2P53632 584 aaKnown RBP6.94□□□□□ -1.3
SEC13YLR208W SGD1Q06132 899 aa6.94□□□□□ -1.3
SEC13YLR208W KRE2P27809 442 aa6.93□□□□□ -1.3
SEC13YLR208W GSM1P42950 618 aa6.93□□□□□ -1.3
SEC13YLR208W CLA4P48562 842 aa6.93□□□□□ -1.3
SEC13YLR208W RTG1P32607 177 aa6.92□□□□□ -1.3
SEC13YLR208W BRN1P38170 754 aa6.92□□□□□ -1.3
SEC13YLR208W ULP1Q02724 621 aa6.92□□□□□ -1.3
SEC13YLR208W SEN54Q02825 467 aaPredicted RBP6.92□□□□□ -1.3
SEC13YLR208W YLR225CQ05948 407 aaKnown RBP6.92□□□□□ -1.3
SEC13YLR208W SUB2Q07478 446 aaKnown RBP6.92□□□□□ -1.3
SEC13YLR208W UGA3P26370 528 aa6.91□□□□□ -1.3
SEC13YLR208W PAH1P32567 862 aa6.91□□□□□ -1.3
SEC13YLR208W SEC61P32915 480 aa6.91□□□□□ -1.3
SEC13YLR208W YGR273CP53329 174 aa6.91□□□□□ -1.3
SEC13YLR208W ZDS2P54786 942 aa6.91□□□□□ -1.3
SEC13YLR208W SPL2P38839 148 aa6.9□□□□□ -1.3
SEC13YLR208W SOL3P38858 249 aa6.9□□□□□ -1.3
SEC13YLR208W MTC3P53077 123 aa6.9□□□□□ -1.3
SEC13YLR208W SUB1P54000 292 aaKnown RBP6.9□□□□□ -1.3
SEC13YLR208W VPS64Q03944 604 aa6.9□□□□□ -1.3
SEC13YLR208W TAO3P40468 2376 aa6.9□□□□□ -1.31
SEC13YLR208W TRK1P12685 1235 aa6.89□□□□□ -1.31
SEC13YLR208W NUG1P40010 520 aaKnown RBP6.89□□□□□ -1.31
SEC13YLR208W ICP55P40051 511 aa6.89□□□□□ -1.31
SEC13YLR208W TFG1P41895 735 aaPredicted RBP6.89□□□□□ -1.31
SEC13YLR208W RPT4P53549 437 aaKnown RBP6.89□□□□□ -1.31
SEC13YLR208W MAM3Q12296 706 aa6.89□□□□□ -1.31
SEC13YLR208W GSC2P40989 1895 aa6.88□□□□□ -1.31
SEC13YLR208W YMR084WA2P2R3 262 aa6.88□□□□□ -1.31
SEC13YLR208W PBS2P08018 668 aa6.88□□□□□ -1.31
SEC13YLR208W ASF1P32447 279 aa6.88□□□□□ -1.31
SEC13YLR208W DAN4P47179 1161 aa6.88□□□□□ -1.31
SEC13YLR208W DOS2P54858 310 aa6.88□□□□□ -1.31
SEC13YLR208W FCP1Q03254 732 aa6.88□□□□□ -1.31
SEC13YLR208W TOS4Q06266 489 aa6.88□□□□□ -1.31
SEC13YLR208W NCR1Q12200 1170 aa6.88□□□□□ -1.31
SEC13YLR208W DPH6Q12429 685 aa6.88□□□□□ -1.31
SEC13YLR208W AI4P03878 556 aa6.87□□□□□ -1.31
SEC13YLR208W MPH3P0CE00 602 aa6.87□□□□□ -1.31
SEC13YLR208W GUA1P38625 525 aaKnown RBP6.87□□□□□ -1.31
SEC13YLR208W REF2P42073 533 aaPredicted RBP6.87□□□□□ -1.31
SEC13YLR208W PEX29Q03370 554 aa6.87□□□□□ -1.31
SEC13YLR208W PRP42Q03776 544 aaKnown RBP6.87□□□□□ -1.31
SEC13YLR208W UBX2Q04228 584 aa6.87□□□□□ -1.31
SEC13YLR208W RPS7AP26786 190 aaKnown RBP6.86□□□□□ -1.31
SEC13YLR208W SPR3P41901 512 aa6.86□□□□□ -1.31
SEC13YLR208W NSE3Q05541 303 aa6.86□□□□□ -1.31
SEC13YLR208W PSF2P40359 213 aa6.85□□□□□ -1.31
SEC13YLR208W NIT1P40447 199 aa6.85□□□□□ -1.31
SEC13YLR208W VPS72Q03388 795 aa6.85□□□□□ -1.31
SEC13YLR208W AIR2Q12476 344 aaKnown RBP6.85□□□□□ -1.31
SEC13YLR208W PFK2P16862 959 aaKnown RBP RIP-Chip data6.83□□□□□ -1.32not detected
SEC13YLR208W MGM1P32266 881 aa6.83□□□□□ -1.32
SEC13YLR208W UBP14P38237 781 aaKnown RBP6.83□□□□□ -1.32
SEC13YLR208W POL5P39985 1022 aaKnown RBP6.83□□□□□ -1.32
SEC13YLR208W YJL171CP46992 396 aa6.83□□□□□ -1.32
SEC13YLR208W RRP46P53256 223 aaPredicted RBP6.83□□□□□ -1.32
SEC13YLR208W VPS62P53285 467 aa6.83□□□□□ -1.32
SEC13YLR208W RTS3P53289 263 aa6.83□□□□□ -1.32
SEC13YLR208W FAR11P53917 953 aa6.83□□□□□ -1.32
SEC13YLR208W PKH1Q03407 766 aa6.83□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 50.1 ms