RNA–Protein interactions for RNA: YLR132C

USB1, Transcript of Putative phosphodiesterase specific for U6 snRNA 3' end modification, yeastyeast

Gene USB1, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USB1YLR132C RPC31P17890 251 aa6.89□□□□□ -1.31
USB1YLR132C QDR2P40474 542 aa6.89□□□□□ -1.31
USB1YLR132C MCX1P38323 520 aaPredicted RBP6.88□□□□□ -1.31
USB1YLR132C BOI2P39969 1040 aa6.88□□□□□ -1.31
USB1YLR132C FOX2Q02207 900 aaKnown RBP6.88□□□□□ -1.31
USB1YLR132C HEH2Q03281 663 aa6.88□□□□□ -1.31
USB1YLR132C YML083CQ04526 418 aa6.88□□□□□ -1.31
USB1YLR132C SSA1P10591 642 aaKnown RBP6.87□□□□□ -1.31
USB1YLR132C NCL1P38205 684 aaKnown RBP6.87□□□□□ -1.31
USB1YLR132C SUB2Q07478 446 aaKnown RBP6.87□□□□□ -1.31
USB1YLR132C NOB1Q08444 459 aaKnown RBP6.87□□□□□ -1.31
USB1YLR132C MON2P48563 1636 aaPredicted RBP6.87□□□□□ -1.31
USB1YLR132C MRPL33P20084 86 aa6.86□□□□□ -1.31
USB1YLR132C YBR197CP38306 217 aa6.86□□□□□ -1.31
USB1YLR132C PRK1P40494 810 aa6.86□□□□□ -1.31
USB1YLR132C CCT8P47079 568 aaKnown RBP6.86□□□□□ -1.31
USB1YLR132C YNR040WP53736 256 aa6.86□□□□□ -1.31
USB1YLR132C YMR187CQ03236 431 aa6.86□□□□□ -1.31
USB1YLR132C VMA3P25515 160 aa6.85□□□□□ -1.31
USB1YLR132C MET1P36150 593 aa6.85□□□□□ -1.31
USB1YLR132C APM2P38700 605 aa6.85□□□□□ -1.31
USB1YLR132C SKN7P38889 622 aa6.85□□□□□ -1.31
USB1YLR132C ALD4P46367 519 aaKnown RBP6.85□□□□□ -1.31
USB1YLR132C PUF6Q04373 656 aaKnown RBP6.84□□□□□ -1.31
USB1YLR132C YCK2P23292 546 aaKnown RBP6.83□□□□□ -1.32
USB1YLR132C NAB2P32505 525 aaKnown RBP RIP-Chip data6.83□□□□□ -1.32not detected
USB1YLR132C PUN1Q06991 263 aa6.83□□□□□ -1.32
USB1YLR132C ISC10P32645 267 aa6.82□□□□□ -1.32
USB1YLR132C RPL34AP87262 121 aaPredicted RBP6.82□□□□□ -1.32
USB1YLR132C YDR215CQ12240 137 aa6.82□□□□□ -1.32
USB1YLR132C ITC1P53125 1264 aa6.81□□□□□ -1.32
USB1YLR132C CWC15Q03772 175 aaKnown RBP6.81□□□□□ -1.32
USB1YLR132C YOR296WQ08748 1289 aa6.81□□□□□ -1.32
USB1YLR132C SRS2P12954 1174 aa6.8□□□□□ -1.32
USB1YLR132C GEF1P37020 779 aa6.8□□□□□ -1.32
USB1YLR132C DYS1P38791 387 aa6.8□□□□□ -1.32
USB1YLR132C IDI1P15496 288 aa6.79□□□□□ -1.32
USB1YLR132C PGM2P37012 569 aaKnown RBP6.79□□□□□ -1.32
USB1YLR132C BSD2P38356 321 aa6.79□□□□□ -1.32
USB1YLR132C SLN1P39928 1220 aaPredicted RBP6.79□□□□□ -1.32
USB1YLR132C INO80P53115 1489 aa6.79□□□□□ -1.32
USB1YLR132C NAR1P23503 491 aaKnown RBP6.78□□□□□ -1.32
USB1YLR132C LDH1P38139 375 aa6.78□□□□□ -1.32
USB1YLR132C GIS4Q04233 774 aa6.78□□□□□ -1.32
USB1YLR132C MRP10O75012 95 aa6.77□□□□□ -1.33
USB1YLR132C ALG14P38242 237 aa6.77□□□□□ -1.33
USB1YLR132C TPS3P38426 1054 aaKnown RBP6.77□□□□□ -1.33
USB1YLR132C NHA1Q99271 985 aa6.77□□□□□ -1.33
USB1YLR132C GIP1P38229 639 aa6.76□□□□□ -1.33
USB1YLR132C YER156CP40093 338 aaKnown RBP6.76□□□□□ -1.33
USB1YLR132C PRY1P47032 299 aa6.75□□□□□ -1.33
USB1YLR132C PNP1Q05788 311 aa6.74□□□□□ -1.33
USB1YLR132C MCA1Q08601 432 aa6.74□□□□□ -1.33
USB1YLR132C MSN1P22148 382 aa6.73□□□□□ -1.33
USB1YLR132C ISW1P38144 1129 aa6.73□□□□□ -1.33
USB1YLR132C KTR2P33550 425 aa6.72□□□□□ -1.33
USB1YLR132C BOI1P38041 980 aaKnown RBP6.72□□□□□ -1.33
USB1YLR132C TAT1P38085 619 aa6.72□□□□□ -1.33
USB1YLR132C BUD9P53226 547 aa6.71□□□□□ -1.34
USB1YLR132C AMN1P38285 549 aaPredicted RBP6.7□□□□□ -1.34
USB1YLR132C YIL165CP40446 119 aa6.7□□□□□ -1.34
USB1YLR132C RRN6P32786 894 aa6.69□□□□□ -1.34
USB1YLR132C HXT8P40886 569 aa6.69□□□□□ -1.34
USB1YLR132C APC11Q12157 165 aa6.69□□□□□ -1.34
USB1YLR132C LSB6P42951 607 aa6.68□□□□□ -1.34
USB1YLR132C PPT1P53043 513 aa6.68□□□□□ -1.34
USB1YLR132C EMG1Q06287 252 aaKnown RBP6.68□□□□□ -1.34
USB1YLR132C RPB10P22139 70 aa6.67□□□□□ -1.34
USB1YLR132C CDC3P32457 520 aaKnown RBP6.67□□□□□ -1.34
USB1YLR132C RRM3P38766 723 aa6.67□□□□□ -1.34
USB1YLR132C SUT1P53032 299 aaKnown RBP6.67□□□□□ -1.34
USB1YLR132C RSC2Q06488 889 aa6.67□□□□□ -1.34
USB1YLR132C GAS5Q08193 484 aa6.67□□□□□ -1.34
USB1YLR132C LSO1Q3E827 93 aa6.67□□□□□ -1.34
USB1YLR132C BOL3P39724 118 aa6.66□□□□□ -1.34
USB1YLR132C RGD2P43556 714 aa6.66□□□□□ -1.34
USB1YLR132C YJL181WP46987 611 aa6.66□□□□□ -1.34
USB1YLR132C AI3P03877 415 aa6.65□□□□□ -1.34
USB1YLR132C SBP1P10080 294 aaKnown RBP6.65□□□□□ -1.34
USB1YLR132C FIR1P40020 876 aa6.65□□□□□ -1.34
USB1YLR132C SLP1Q12232 587 aa6.65□□□□□ -1.34
USB1YLR132C TED1P40533 473 aa6.64□□□□□ -1.35
USB1YLR132C YPL034WQ03083 165 aa6.64□□□□□ -1.35
USB1YLR132C FUR4P05316 633 aaKnown RBP6.63□□□□□ -1.35
USB1YLR132C AIM46P38885 310 aa6.63□□□□□ -1.35
USB1YLR132C GIP2P40036 548 aa6.63□□□□□ -1.35
USB1YLR132C SOK2P53438 785 aaPredicted RBP6.63□□□□□ -1.35
USB1YLR132C TY4B-PA0A0B7P3V8 1104 aa6.62□□□□□ -1.35
USB1YLR132C YBR287WP38355 427 aa6.62□□□□□ -1.35
USB1YLR132C NTA1P40354 457 aa6.62□□□□□ -1.35
USB1YLR132C INP51P40559 946 aaKnown RBP6.62□□□□□ -1.35
USB1YLR132C TY4A-HQ6Q5P6 413 aa6.62□□□□□ -1.35
USB1YLR132C SAC7P17121 654 aa6.61□□□□□ -1.35
USB1YLR132C SFA1P32771 386 aa6.61□□□□□ -1.35
USB1YLR132C TFA2P36145 328 aa6.61□□□□□ -1.35
USB1YLR132C SLD2P34252 453 aa6.6□□□□□ -1.35
USB1YLR132C RAD55P38953 406 aa6.6□□□□□ -1.35
USB1YLR132C BIO5P53744 561 aaKnown RBP6.6□□□□□ -1.35
USB1YLR132C ALD3P54114 506 aa6.6□□□□□ -1.35
USB1YLR132C TIF6Q12522 245 aaKnown RBP6.6□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms