RNA–Protein interactions for RNA: YLR025W

SNF7, Transcript of One of four subunits of the ESCRT-III complex, yeastyeast

Gene SNF7, Length 723 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF7YLR025W YNL050CP53952 270 aa8.98□□□□□ -0.97
SNF7YLR025W THI13Q07748 340 aa8.98□□□□□ -0.97
SNF7YLR025W HSP104P31539 908 aaKnown RBP8.97□□□□□ -0.97
SNF7YLR025W YBR287WP38355 427 aa8.97□□□□□ -0.97
SNF7YLR025W RSC30P38781 883 aa8.97□□□□□ -0.97
SNF7YLR025W NOP8Q08287 484 aaPredicted RBP8.97□□□□□ -0.97
SNF7YLR025W SAS4Q04003 481 aa8.96□□□□□ -0.98
SNF7YLR025W AOS1Q06624 347 aa8.96□□□□□ -0.98
SNF7YLR025W VRP1P37370 817 aa8.95□□□□□ -0.98
SNF7YLR025W ECM16Q04217 1267 aaKnown RBP8.95□□□□□ -0.98
SNF7YLR025W TRM1P15565 570 aaKnown RBP8.94□□□□□ -0.98
SNF7YLR025W PRP5P21372 849 aaPredicted RBP8.94□□□□□ -0.98
SNF7YLR025W PAT1P25644 796 aaKnown RBP8.94□□□□□ -0.98
SNF7YLR025W PRP45P28004 379 aaPredicted RBP8.94□□□□□ -0.98
SNF7YLR025W TUB4P53378 473 aa8.94□□□□□ -0.98
SNF7YLR025W GYP1Q08484 637 aa8.94□□□□□ -0.98
SNF7YLR025W NTH2P35172 780 aa8.93□□□□□ -0.98
SNF7YLR025W YBL036CP38197 257 aa8.93□□□□□ -0.98
SNF7YLR025W CTF4Q01454 927 aa8.93□□□□□ -0.98
SNF7YLR025W AGE1Q04412 482 aa8.93□□□□□ -0.98
SNF7YLR025W NSE3Q05541 303 aa8.93□□□□□ -0.98
SNF7YLR025W YRF1-4O13559 1382 aa8.92□□□□□ -0.98
SNF7YLR025W TBF1Q02457 562 aa8.92□□□□□ -0.98
SNF7YLR025W IME2P32581 645 aa8.91□□□□□ -0.98
SNF7YLR025W BCK2P33306 851 aa8.91□□□□□ -0.98
SNF7YLR025W YNG2P38806 282 aaKnown RBP8.91□□□□□ -0.98
SNF7YLR025W YPP1P46951 817 aa8.91□□□□□ -0.98
SNF7YLR025W SRT1Q03175 343 aa8.91□□□□□ -0.98
SNF7YLR025W BMS1Q08965 1183 aaKnown RBP8.91□□□□□ -0.98
SNF7YLR025W SPT16P32558 1035 aaKnown RBP8.9□□□□□ -0.98
SNF7YLR025W YIR014WP40570 242 aa8.9□□□□□ -0.98
SNF7YLR025W RLF2Q12495 606 aa8.9□□□□□ -0.98
SNF7YLR025W RRN7P40992 514 aa8.89□□□□□ -0.99
SNF7YLR025W YJL007CP47080 104 aa8.89□□□□□ -0.99
SNF7YLR025W SLM3Q12093 417 aa8.89□□□□□ -0.99
SNF7YLR025W EDE1P34216 1381 aa8.88□□□□□ -0.99
SNF7YLR025W CLC1P17891 233 aa8.88□□□□□ -0.99
SNF7YLR025W UGA3P26370 528 aa8.88□□□□□ -0.99
SNF7YLR025W OPY1P38271 328 aa8.88□□□□□ -0.99
SNF7YLR025W NMD2P38798 1089 aaKnown RBP8.88□□□□□ -0.99
SNF7YLR025W TCB1Q12466 1186 aa8.88□□□□□ -0.99
SNF7YLR025W KCC4P25389 1037 aa8.87□□□□□ -0.99
SNF7YLR025W CSI1Q04368 295 aa8.87□□□□□ -0.99
SNF7YLR025W COQ4O13525 335 aa8.86□□□□□ -0.99
SNF7YLR025W MRF1P30775 413 aaPredicted RBP8.86□□□□□ -0.99
SNF7YLR025W PAC1P39946 494 aaKnown RBP8.86□□□□□ -0.99
SNF7YLR025W BIM1P40013 344 aa8.86□□□□□ -0.99
SNF7YLR025W XKS1P42826 600 aa8.86□□□□□ -0.99
SNF7YLR025W RPA14P50106 137 aa8.86□□□□□ -0.99
SNF7YLR025W SPO1P53541 631 aa8.86□□□□□ -0.99
SNF7YLR025W YDL206WQ12424 762 aa8.86□□□□□ -0.99
SNF7YLR025W APC1P53886 1748 aa8.85□□□□□ -0.99
SNF7YLR025W TY4B-HP0C2J7 1802 aa8.85□□□□□ -0.99
SNF7YLR025W TY4B-JP47024 1803 aa8.85□□□□□ -0.99
SNF7YLR025W MAK16P10962 306 aaPredicted RBP8.85□□□□□ -0.99
SNF7YLR025W RFC1P38630 861 aaKnown RBP8.85□□□□□ -0.99
SNF7YLR025W YRF1-2P40105 1681 aa8.85□□□□□ -0.99
SNF7YLR025W VPS24P36095 224 aaKnown RBP8.84□□□□□ -0.99
SNF7YLR025W MSB3P48566 633 aaPredicted RBP8.84□□□□□ -0.99
SNF7YLR025W KXD1P53158 218 aa8.84□□□□□ -0.99
SNF7YLR025W YPR097WQ06839 1073 aa8.84□□□□□ -0.99
SNF7YLR025W PCT1P13259 424 aa8.83□□□□□ -1
SNF7YLR025W SPT5P27692 1063 aaKnown RBP8.83□□□□□ -1
SNF7YLR025W XDJ1P39102 459 aa8.83□□□□□ -1
SNF7YLR025W NKP2Q06162 153 aa8.83□□□□□ -1
SNF7YLR025W ALR1Q08269 859 aa8.83□□□□□ -1
SNF7YLR025W RAD50P12753 1312 aa8.82□□□□□ -1
SNF7YLR025W RAD4P14736 754 aa8.82□□□□□ -1
SNF7YLR025W BDP1P46678 594 aa8.82□□□□□ -1
SNF7YLR025W RPS19AP07280 144 aaKnown RBP8.81□□□□□ -1
SNF7YLR025W RPS19BP07281 144 aaPredicted RBP8.81□□□□□ -1
SNF7YLR025W MRP7P12687 371 aa8.81□□□□□ -1
SNF7YLR025W MEC3Q02574 474 aa8.81□□□□□ -1
SNF7YLR025W YOL057WQ08225 711 aa8.81□□□□□ -1
SNF7YLR025W ATG32P40458 529 aa8.8□□□□□ -1
SNF7YLR025W FKS3Q04952 1785 aa8.8□□□□□ -1
SNF7YLR025W RRP5Q05022 1729 aaKnown RBP8.8□□□□□ -1
SNF7YLR025W PDC1P06169 563 aaKnown RBP8.79□□□□□ -1
SNF7YLR025W ERG12P07277 443 aa8.79□□□□□ -1
SNF7YLR025W BIO2P32451 375 aa8.79□□□□□ -1
SNF7YLR025W RPL34BP40525 121 aaKnown RBP8.79□□□□□ -1
SNF7YLR025W HXT10P43581 546 aa8.79□□□□□ -1
SNF7YLR025W ITC1P53125 1264 aa8.79□□□□□ -1
SNF7YLR025W NAF1P53919 492 aaKnown RBP8.79□□□□□ -1
SNF7YLR025W RAD24P32641 659 aa8.78□□□□□ -1
SNF7YLR025W SNF7P39929 240 aaKnown RBP8.78□□□□□ -1
SNF7YLR025W DJP1P40564 432 aa8.78□□□□□ -1
SNF7YLR025W ATG13Q06628 738 aa8.78□□□□□ -1
SNF7YLR025W ALE1Q08548 619 aa8.78□□□□□ -1
SNF7YLR025W NCB2Q92317 146 aa8.78□□□□□ -1
SNF7YLR025W MOD5P07884 428 aa8.77□□□□□ -1.01
SNF7YLR025W TIF1P10081 395 aaKnown RBP8.77□□□□□ -1.01
SNF7YLR025W SUP45P12385 437 aaKnown RBP8.77□□□□□ -1.01
SNF7YLR025W YNL108CP53929 270 aa8.77□□□□□ -1.01
SNF7YLR025W COG8Q04632 607 aa8.77□□□□□ -1.01
SNF7YLR025W LYS2P07702 1392 aa8.76□□□□□ -1.01
SNF7YLR025W VAS1P07806 1104 aaKnown RBP8.76□□□□□ -1.01
SNF7YLR025W DLD1P32891 587 aa8.76□□□□□ -1.01
SNF7YLR025W DNM1P54861 757 aa8.76□□□□□ -1.01
SNF7YLR025W NUP145P49687 1317 aa8.76□□□□□ -1.01
Retrieved 100 of 5,963 RNA–protein pairs in 28.6 ms