RNA–Protein interactions for RNA: YLR011W

LOT6, Transcript of FMN-dependent NAD(P)H:quinone reductase, yeastyeast

Gene LOT6, Length 576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LOT6YLR011W VID28P40547 921 aa8.11□□□□□ -1.11
LOT6YLR011W PIB2P53191 635 aa8.11□□□□□ -1.11
LOT6YLR011W PGA3Q12746 312 aaKnown RBP8.11□□□□□ -1.11
LOT6YLR011W MAL33P38157 468 aa8.1□□□□□ -1.11
LOT6YLR011W YHL017WP38745 532 aa8.1□□□□□ -1.11
LOT6YLR011W CIC1P38779 376 aaKnown RBP8.1□□□□□ -1.11
LOT6YLR011W SMC3P47037 1230 aa8.1□□□□□ -1.11
LOT6YLR011W VPS60Q03390 229 aa8.1□□□□□ -1.11
LOT6YLR011W VMS1Q04311 632 aaKnown RBP8.1□□□□□ -1.11
LOT6YLR011W TCB1Q12466 1186 aa8.1□□□□□ -1.11
LOT6YLR011W SLA1P32790 1244 aa8.09□□□□□ -1.11
LOT6YLR011W RRM3P38766 723 aa8.09□□□□□ -1.11
LOT6YLR011W YER130CP39959 443 aa8.09□□□□□ -1.11
LOT6YLR011W JSN1P47135 1091 aaKnown RBP RIP-Chip data8.09□□□□□ -1.11not detected
LOT6YLR011W RFC5P38251 354 aa8.08□□□□□ -1.12
LOT6YLR011W FYV10P40492 516 aa8.08□□□□□ -1.12
LOT6YLR011W THI12P42883 340 aa8.08□□□□□ -1.12
LOT6YLR011W THI5P43534 340 aa8.08□□□□□ -1.12
LOT6YLR011W HXT10P43581 546 aa8.08□□□□□ -1.12
LOT6YLR011W THI11P47183 340 aa8.08□□□□□ -1.12
LOT6YLR011W YPT11P48559 417 aa8.08□□□□□ -1.12
LOT6YLR011W THI13Q07748 340 aa8.08□□□□□ -1.12
LOT6YLR011W MSB4Q12317 492 aa8.08□□□□□ -1.12
LOT6YLR011W OSM1P21375 501 aaKnown RBP8.07□□□□□ -1.12
LOT6YLR011W CTH1P47976 325 aa8.07□□□□□ -1.12
LOT6YLR011W YKE2P52553 114 aa8.07□□□□□ -1.12
LOT6YLR011W UTP13Q05946 817 aaKnown RBP8.07□□□□□ -1.12
LOT6YLR011W GSY2P27472 705 aa8.06□□□□□ -1.12
LOT6YLR011W APL2P36000 726 aaPredicted RBP8.06□□□□□ -1.12
LOT6YLR011W SET1P38827 1080 aaKnown RBP8.06□□□□□ -1.12
LOT6YLR011W NOC2P39744 710 aaKnown RBP8.06□□□□□ -1.12
LOT6YLR011W BUD6P41697 788 aa8.06□□□□□ -1.12
LOT6YLR011W TFG2P41896 400 aaPredicted RBP8.06□□□□□ -1.12
LOT6YLR011W CTI6Q08923 506 aa8.06□□□□□ -1.12
LOT6YLR011W NOP14Q99207 810 aaKnown RBP8.06□□□□□ -1.12
LOT6YLR011W MATALPHA2P0CY08 210 aa8.05□□□□□ -1.12
LOT6YLR011W HMLALPHA2P0CY09 210 aa8.05□□□□□ -1.12
LOT6YLR011W MRC1P25588 1096 aa8.05□□□□□ -1.12
LOT6YLR011W SPB4P25808 606 aaPredicted RBP8.05□□□□□ -1.12
LOT6YLR011W SRP40P32583 406 aaPredicted RBP8.05□□□□□ -1.12
LOT6YLR011W FBP26P32604 452 aa8.05□□□□□ -1.12
LOT6YLR011W PRP31P49704 494 aaPredicted RBP8.05□□□□□ -1.12
LOT6YLR011W RMT2Q03305 412 aa8.05□□□□□ -1.12
LOT6YLR011W WAR1Q03631 944 aa8.05□□□□□ -1.12
LOT6YLR011W PSH1Q12161 406 aa8.05□□□□□ -1.12
LOT6YLR011W SSK22P25390 1331 aaPredicted RBP8.04□□□□□ -1.12
LOT6YLR011W SUP35P05453 685 aaKnown RBP8.04□□□□□ -1.12
LOT6YLR011W PET111P08468 800 aa8.04□□□□□ -1.12
LOT6YLR011W CLB5P30283 435 aa8.04□□□□□ -1.12
LOT6YLR011W SPC110P32380 944 aa8.04□□□□□ -1.12
LOT6YLR011W TIF4632P39936 914 aaKnown RBP8.04□□□□□ -1.12
LOT6YLR011W TGL3P40308 642 aa8.04□□□□□ -1.12
LOT6YLR011W EPS1P40557 701 aa8.04□□□□□ -1.12
LOT6YLR011W OSW7P43611 510 aa8.04□□□□□ -1.12
LOT6YLR011W BBC1P47068 1157 aa8.04□□□□□ -1.12
LOT6YLR011W SCY1P53009 804 aa8.04□□□□□ -1.12
LOT6YLR011W PKH1Q03407 766 aa8.04□□□□□ -1.12
LOT6YLR011W COG4Q06096 861 aa8.04□□□□□ -1.12
LOT6YLR011W ESF1Q06344 628 aaKnown RBP8.04□□□□□ -1.12
LOT6YLR011W GYP5Q12344 894 aa8.04□□□□□ -1.12
LOT6YLR011W DEP1P31385 405 aa8.03□□□□□ -1.12
LOT6YLR011W IMP2'P32351 346 aa8.03□□□□□ -1.12
LOT6YLR011W YKT6P36015 200 aaKnown RBP8.03□□□□□ -1.12
LOT6YLR011W RFT1P38206 574 aaPredicted RBP8.03□□□□□ -1.12
LOT6YLR011W OSH3P38713 996 aaKnown RBP8.03□□□□□ -1.12
LOT6YLR011W YGL082WP53155 381 aa8.03□□□□□ -1.12
LOT6YLR011W YBP2P53169 641 aa8.03□□□□□ -1.12
LOT6YLR011W ADE16P54113 591 aaKnown RBP8.03□□□□□ -1.12
LOT6YLR011W SRC1Q03707 834 aa8.03□□□□□ -1.12
LOT6YLR011W YLR407WQ06070 228 aa8.03□□□□□ -1.12
LOT6YLR011W OPI1P21957 404 aa8.02□□□□□ -1.13
LOT6YLR011W PEP3P27801 918 aa8.02□□□□□ -1.13
LOT6YLR011W YLR271WQ06152 274 aa8.02□□□□□ -1.13
LOT6YLR011W SSP2Q08646 371 aa8.02□□□□□ -1.13
LOT6YLR011W NOP53Q12080 455 aaKnown RBP8.02□□□□□ -1.13
LOT6YLR011W AI2P03876 854 aa8.01□□□□□ -1.13
LOT6YLR011W PGI1P12709 554 aaKnown RBP8.01□□□□□ -1.13
LOT6YLR011W PET123P17558 318 aa8.01□□□□□ -1.13
LOT6YLR011W CLB1P24868 471 aa8.01□□□□□ -1.13
LOT6YLR011W FCP1Q03254 732 aa8.01□□□□□ -1.13
LOT6YLR011W ATG13Q06628 738 aa8.01□□□□□ -1.13
LOT6YLR011W YCG1Q06680 1035 aa8.01□□□□□ -1.13
LOT6YLR011W YPR204WQ08995 1032 aa8.01□□□□□ -1.13
LOT6YLR011W SEC18P18759 758 aaKnown RBP8□□□□□ -1.13
LOT6YLR011W CDC15P27636 974 aa8□□□□□ -1.13
LOT6YLR011W MSH4P40965 878 aaPredicted RBP8□□□□□ -1.13
LOT6YLR011W ECM23Q02710 187 aa8□□□□□ -1.13
LOT6YLR011W MTC5Q03897 1148 aa8□□□□□ -1.13
LOT6YLR011W RPN7Q06103 429 aaKnown RBP8□□□□□ -1.13
LOT6YLR011W APL4Q12028 832 aa8□□□□□ -1.13
LOT6YLR011W SNU66Q12420 587 aaPredicted RBP8□□□□□ -1.13
LOT6YLR011W RSF2P46974 1380 aa7.99□□□□□ -1.13
LOT6YLR011W HSP82P02829 709 aaKnown RBP7.99□□□□□ -1.13
LOT6YLR011W SLX5P32828 619 aaKnown RBP7.99□□□□□ -1.13
LOT6YLR011W PCH2P38126 564 aa7.99□□□□□ -1.13
LOT6YLR011W PSY4P38193 441 aa7.99□□□□□ -1.13
LOT6YLR011W EPL1P43572 832 aa7.99□□□□□ -1.13
LOT6YLR011W VPS75P53853 264 aa7.99□□□□□ -1.13
LOT6YLR011W TLG2Q08144 397 aa7.99□□□□□ -1.13
LOT6YLR011W GIN4Q12263 1142 aa7.99□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms