RNA–Protein interactions for RNA: YKR056W

TRM2, Transcript of tRNA methyltransferase, yeastyeast

Gene TRM2, Length 1,920 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM2YKR056W FRT1Q99332 602 aa3.7□□□□□ -1.82
TRM2YKR056W MET4P32389 672 aa3.69□□□□□ -1.82
TRM2YKR056W OMA1P36163 345 aa3.69□□□□□ -1.82
TRM2YKR056W GRS1P38088 690 aaKnown RBP3.69□□□□□ -1.82
TRM2YKR056W YPP1P46951 817 aa3.69□□□□□ -1.82
TRM2YKR056W ROM1P53046 1155 aa3.69□□□□□ -1.82
TRM2YKR056W OYE2Q03558 400 aaKnown RBP3.69□□□□□ -1.82
TRM2YKR056W YJR107WP47145 328 aa3.68□□□□□ -1.82
TRM2YKR056W FPS1P23900 669 aa3.68□□□□□ -1.82
TRM2YKR056W SLA1P32790 1244 aa3.68□□□□□ -1.82
TRM2YKR056W NNF1P47149 201 aa3.68□□□□□ -1.82
TRM2YKR056W ACS2P52910 683 aaKnown RBP3.68□□□□□ -1.82
TRM2YKR056W MSN5P52918 1224 aa3.68□□□□□ -1.82
TRM2YKR056W STE20Q03497 939 aaKnown RBP3.68□□□□□ -1.82
TRM2YKR056W SVF1Q05515 481 aa3.68□□□□□ -1.82
TRM2YKR056W PNP1Q05788 311 aa3.68□□□□□ -1.82
TRM2YKR056W NUT2Q06213 157 aa3.68□□□□□ -1.82
TRM2YKR056W GUT2P32191 649 aa3.67□□□□□ -1.82
TRM2YKR056W HAL5P38970 855 aaKnown RBP3.67□□□□□ -1.82
TRM2YKR056W ATG1P53104 897 aa3.67□□□□□ -1.82
TRM2YKR056W YAF9P53930 226 aa3.67□□□□□ -1.82
TRM2YKR056W AHP1P38013 176 aaKnown RBP3.66□□□□□ -1.82
TRM2YKR056W SSN3P39073 555 aa3.66□□□□□ -1.82
TRM2YKR056W PRY1P47032 299 aa3.66□□□□□ -1.82
TRM2YKR056W ATG20Q07528 640 aa3.66□□□□□ -1.82
TRM2YKR056W MNL2Q12205 849 aa3.66□□□□□ -1.82
TRM2YKR056W TY1A-DR3Q12441 440 aa3.66□□□□□ -1.82
TRM2YKR056W PHO87P25360 923 aa3.66□□□□□ -1.82
TRM2YKR056W FPR4Q06205 392 aaPredicted RBP3.66□□□□□ -1.82
TRM2YKR056W JIP5Q06214 492 aaPredicted RBP3.66□□□□□ -1.82
TRM2YKR056W GPI13Q07830 1017 aa3.66□□□□□ -1.82
TRM2YKR056W FYV10P40492 516 aa3.65□□□□□ -1.83
TRM2YKR056W INP52P50942 1183 aa3.65□□□□□ -1.83
TRM2YKR056W RNH70P53331 553 aa3.65□□□□□ -1.83
TRM2YKR056W ALD3P54114 506 aa3.65□□□□□ -1.83
TRM2YKR056W SUV3P32580 737 aa3.64□□□□□ -1.83
TRM2YKR056W SOH1P38633 127 aa3.64□□□□□ -1.83
TRM2YKR056W NMD2P38798 1089 aaKnown RBP3.64□□□□□ -1.83
TRM2YKR056W QDR1P40475 563 aa3.64□□□□□ -1.83
TRM2YKR056W THI12P42883 340 aa3.64□□□□□ -1.83
TRM2YKR056W THI5P43534 340 aa3.64□□□□□ -1.83
TRM2YKR056W IOC3P43596 787 aa3.64□□□□□ -1.83
TRM2YKR056W ACF4P47129 309 aa3.64□□□□□ -1.83
TRM2YKR056W THI11P47183 340 aa3.64□□□□□ -1.83
TRM2YKR056W THI13Q07748 340 aa3.64□□□□□ -1.83
TRM2YKR056W YOL098CQ12496 1037 aa3.64□□□□□ -1.83
TRM2YKR056W ISR1Q06098 443 aaKnown RBP3.64□□□□□ -1.83
TRM2YKR056W TOP1P04786 769 aa3.63□□□□□ -1.83
TRM2YKR056W SRS2P12954 1174 aa3.63□□□□□ -1.83
TRM2YKR056W BOI1P38041 980 aaKnown RBP3.63□□□□□ -1.83
TRM2YKR056W VAC8P39968 578 aa3.63□□□□□ -1.83
TRM2YKR056W WTM2Q12206 467 aa3.63□□□□□ -1.83
TRM2YKR056W CIT2P08679 460 aa3.62□□□□□ -1.83
TRM2YKR056W HAP4P14064 554 aa3.62□□□□□ -1.83
TRM2YKR056W PDC5P16467 563 aaKnown RBP3.62□□□□□ -1.83
TRM2YKR056W KNS1P32350 737 aaPredicted RBP3.62□□□□□ -1.83
TRM2YKR056W GLO3P38682 493 aaKnown RBP3.62□□□□□ -1.83
TRM2YKR056W AVT1P47082 602 aa3.62□□□□□ -1.83
TRM2YKR056W PUN1Q06991 263 aa3.62□□□□□ -1.83
TRM2YKR056W CBC2Q08920 208 aaKnown RBP RIP-Chip data3.62□□□□□ -1.83not detected
TRM2YKR056W TSC13Q99190 310 aa3.62□□□□□ -1.83
TRM2YKR056W FUR4P05316 633 aaKnown RBP3.62□□□□□ -1.83
TRM2YKR056W PDI1P17967 522 aaKnown RBP3.62□□□□□ -1.83
TRM2YKR056W SPR28Q04921 423 aa3.62□□□□□ -1.83
TRM2YKR056W HDA3Q06623 655 aa3.62□□□□□ -1.83
TRM2YKR056W LSO1Q3E827 93 aa3.62□□□□□ -1.83
TRM2YKR056W PHO4P07270 312 aaKnown RBP3.61□□□□□ -1.83
TRM2YKR056W MCM2P29469 868 aa3.61□□□□□ -1.83
TRM2YKR056W ALD6P54115 500 aaKnown RBP3.61□□□□□ -1.83
TRM2YKR056W MGE1P38523 228 aa3.6□□□□□ -1.83
TRM2YKR056W VPS16Q03308 798 aa3.6□□□□□ -1.83
TRM2YKR056W UTP13Q05946 817 aaKnown RBP3.6□□□□□ -1.83
TRM2YKR056W GAS4Q08271 471 aa3.6□□□□□ -1.83
TRM2YKR056W DAT1P13483 248 aaKnown RBP3.6□□□□□ -1.83
TRM2YKR056W BUD6P41697 788 aa3.6□□□□□ -1.83
TRM2YKR056W DAK2P43550 591 aa3.6□□□□□ -1.83
TRM2YKR056W MTO1P53070 669 aa3.6□□□□□ -1.83
TRM2YKR056W KTR2P33550 425 aa3.59□□□□□ -1.83
TRM2YKR056W MRPL16P38064 232 aa3.59□□□□□ -1.83
TRM2YKR056W TAT2P38967 592 aa3.59□□□□□ -1.83
TRM2YKR056W TOS4Q06266 489 aa3.59□□□□□ -1.83
TRM2YKR056W PIN2Q12057 282 aa3.59□□□□□ -1.83
TRM2YKR056W ALA1P40825 983 aaKnown RBP3.58□□□□□ -1.84
TRM2YKR056W YJR008WP47085 338 aa3.58□□□□□ -1.84
TRM2YKR056W TRS120Q04183 1289 aa3.58□□□□□ -1.84
TRM2YKR056W SSF2Q12153 453 aaPredicted RBP3.58□□□□□ -1.84
TRM2YKR056W RPT1P33299 467 aaKnown RBP3.58□□□□□ -1.84
TRM2YKR056W ALG12P53730 551 aa3.58□□□□□ -1.84
TRM2YKR056W UBX5Q06682 500 aa3.58□□□□□ -1.84
TRM2YKR056W VAN1P23642 535 aa3.57□□□□□ -1.84
TRM2YKR056W SRP40P32583 406 aaPredicted RBP3.57□□□□□ -1.84
TRM2YKR056W YBR197CP38306 217 aa3.57□□□□□ -1.84
TRM2YKR056W NUG1P40010 520 aaKnown RBP3.57□□□□□ -1.84
TRM2YKR056W UTP7P40055 554 aaKnown RBP3.57□□□□□ -1.84
TRM2YKR056W RPN4Q03465 531 aa3.57□□□□□ -1.84
TRM2YKR056W IRE1P32361 1115 aa3.56□□□□□ -1.84
TRM2YKR056W AIM9P40053 627 aaKnown RBP3.56□□□□□ -1.84
TRM2YKR056W NSE3Q05541 303 aa3.56□□□□□ -1.84
TRM2YKR056W APC11Q12157 165 aa3.56□□□□□ -1.84
TRM2YKR056W SPT2P06843 333 aaPredicted RBP3.56□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms