RNA–Protein interactions for RNA: YKL015W

PUT3, Transcript of Transcriptional activator, yeast

Gene PUT3, Length 2,940 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PUT3	YKL015W	SNF2	P22082	1703 aa		3.22	□□□□□ -1.89
PUT3	YKL015W	NAF1	P53919	492 aa	Known RBP	3.22	□□□□□ -1.89
PUT3	YKL015W	STE20	Q03497	939 aa	Known RBP	3.22	□□□□□ -1.89
PUT3	YKL015W	YPR204W	Q08995	1032 aa		3.22	□□□□□ -1.89
PUT3	YKL015W	ADE6	P38972	1358 aa	Known RBP	3.21	□□□□□ -1.9
PUT3	YKL015W	DAT1	P13483	248 aa	Known RBP	3.21	□□□□□ -1.9
PUT3	YKL015W	YDJ1	P25491	409 aa	Known RBP	3.21	□□□□□ -1.9
PUT3	YKL015W	YBL086C	P38177	466 aa		3.21	□□□□□ -1.9
PUT3	YKL015W	FKS3	Q04952	1785 aa		3.21	□□□□□ -1.9
PUT3	YKL015W	RSF2	P46974	1380 aa		3.21	□□□□□ -1.9
PUT3	YKL015W	BIO2	P32451	375 aa		3.21	□□□□□ -1.9
PUT3	YKL015W	RPP2B	P02400	110 aa	Known RBP	3.2	□□□□□ -1.9
PUT3	YKL015W	ATG3	P40344	310 aa		3.2	□□□□□ -1.9
PUT3	YKL015W	KTR7	P40504	517 aa		3.2	□□□□□ -1.9
PUT3	YKL015W	TY4B-H	P0C2J7	1802 aa		3.2	□□□□□ -1.9
PUT3	YKL015W	TY4B-J	P47024	1803 aa		3.2	□□□□□ -1.9
PUT3	YKL015W	ISF1	P32488	338 aa		3.2	□□□□□ -1.9
PUT3	YKL015W	EMW1	P42842	904 aa	Known RBP	3.2	□□□□□ -1.9
PUT3	YKL015W	MSB3	P48566	633 aa	Predicted RBP	3.2	□□□□□ -1.9
PUT3	YKL015W	YLR419W	Q06698	1435 aa	Known RBP	3.2	□□□□□ -1.9
PUT3	YKL015W	TBS1	P38114	1094 aa		3.2	□□□□□ -1.9
PUT3	YKL015W	YJR115W	P47152	169 aa		3.2	□□□□□ -1.9
PUT3	YKL015W	DFG5	Q05031	458 aa		3.2	□□□□□ -1.9
PUT3	YKL015W	PSK1	P31374	1356 aa		3.19	□□□□□ -1.9
PUT3	YKL015W	YRF1-3	P0CX14	1859 aa		3.19	□□□□□ -1.9
PUT3	YKL015W	YRF1-7	P0CX15	1859 aa		3.19	□□□□□ -1.9
PUT3	YKL015W	YRF1-6	P53819	1859 aa		3.19	□□□□□ -1.9
PUT3	YKL015W	RPS9B	P05755	195 aa	Known RBP	3.19	□□□□□ -1.9
PUT3	YKL015W	SPT5	P27692	1063 aa	Known RBP	3.19	□□□□□ -1.9
PUT3	YKL015W	DLD3	P39976	496 aa	Known RBP	3.19	□□□□□ -1.9
PUT3	YKL015W	YPP1	P46951	817 aa		3.19	□□□□□ -1.9
PUT3	YKL015W	PRP43	P53131	767 aa	Known RBP	3.19	□□□□□ -1.9
PUT3	YKL015W	YLR346C	Q06139	101 aa		3.19	□□□□□ -1.9
PUT3	YKL015W	BIM1	P40013	344 aa		3.19	□□□□□ -1.9
PUT3	YKL015W	EMP47	P43555	445 aa		3.19	□□□□□ -1.9
PUT3	YKL015W	FRA1	Q07825	749 aa		3.19	□□□□□ -1.9
PUT3	YKL015W	MCM16	Q12262	181 aa		3.19	□□□□□ -1.9
PUT3	YKL015W	ARG82	P07250	355 aa		3.18	□□□□□ -1.9
PUT3	YKL015W	SUP45	P12385	437 aa	Known RBP	3.18	□□□□□ -1.9
PUT3	YKL015W	PAF1	P38351	445 aa		3.18	□□□□□ -1.9
PUT3	YKL015W	BDS1	Q08347	646 aa		3.18	□□□□□ -1.9
PUT3	YKL015W	RTG2	P32608	588 aa	Known RBP	3.18	□□□□□ -1.9
PUT3	YKL015W	SCT1	P32784	759 aa		3.18	□□□□□ -1.9
PUT3	YKL015W	CPS1	P27614	576 aa		3.17	□□□□□ -1.9
PUT3	YKL015W	ENO2	P00925	437 aa	Known RBP	3.17	□□□□□ -1.9
PUT3	YKL015W	ATG32	P40458	529 aa		3.17	□□□□□ -1.9
PUT3	YKL015W	PTK2	P47116	818 aa	Known RBP	3.17	□□□□□ -1.9
PUT3	YKL015W	MET22	P32179	357 aa		3.16	□□□□□ -1.9
PUT3	YKL015W	ATG20	Q07528	640 aa		3.16	□□□□□ -1.9
PUT3	YKL015W	PRP5	P21372	849 aa	Predicted RBP	3.16	□□□□□ -1.9
PUT3	YKL015W	PRP40	P33203	583 aa	Known RBP	3.16	□□□□□ -1.9
PUT3	YKL015W	SOH1	P38633	127 aa		3.16	□□□□□ -1.9
PUT3	YKL015W	ALA1	P40825	983 aa	Known RBP	3.16	□□□□□ -1.9
PUT3	YKL015W	APL6	P46682	809 aa		3.16	□□□□□ -1.9
PUT3	YKL015W	NPR2	P39923	615 aa		3.15	□□□□□ -1.9
PUT3	YKL015W	DOT5	P40553	215 aa		3.15	□□□□□ -1.9
PUT3	YKL015W	APC1	P53886	1748 aa		3.15	□□□□□ -1.91
PUT3	YKL015W	TIF1	P10081	395 aa	Known RBP	3.15	□□□□□ -1.91
PUT3	YKL015W	FBP26	P32604	452 aa		3.15	□□□□□ -1.91
PUT3	YKL015W	CTH1	P47976	325 aa		3.15	□□□□□ -1.91
PUT3	YKL015W	RIM21	P48565	533 aa		3.15	□□□□□ -1.91
PUT3	YKL015W	ISR1	Q06098	443 aa	Known RBP	3.15	□□□□□ -1.91
PUT3	YKL015W	PRP45	P28004	379 aa	Predicted RBP	3.14	□□□□□ -1.91
PUT3	YKL015W	UTR2	P32623	467 aa		3.14	□□□□□ -1.91
PUT3	YKL015W	DLD1	P32891	587 aa		3.14	□□□□□ -1.91
PUT3	YKL015W	RPN11	P43588	306 aa	Known RBP	3.14	□□□□□ -1.91
PUT3	YKL015W	AAD14	P42884	376 aa		3.14	□□□□□ -1.91
PUT3	YKL015W	YJL181W	P46987	611 aa		3.14	□□□□□ -1.91
PUT3	YKL015W	LSC2	P53312	427 aa		3.14	□□□□□ -1.91
PUT3	YKL015W	ALD3	P54114	506 aa		3.14	□□□□□ -1.91
PUT3	YKL015W	FOX2	Q02207	900 aa	Known RBP	3.14	□□□□□ -1.91
PUT3	YKL015W	YDR444W	Q04093	687 aa		3.14	□□□□□ -1.91
PUT3	YKL015W	CAB1	Q04430	367 aa		3.14	□□□□□ -1.91
PUT3	YKL015W	TCB1	Q12466	1186 aa		3.14	□□□□□ -1.91
PUT3	YKL015W	STE6	P12866	1290 aa		3.13	□□□□□ -1.91
PUT3	YKL015W	ISU1	Q03020	165 aa		3.13	□□□□□ -1.91
PUT3	YKL015W	SIR4	P11978	1358 aa		3.13	□□□□□ -1.91
PUT3	YKL015W	MIP1	P15801	1254 aa		3.13	□□□□□ -1.91
PUT3	YKL015W	RDS2	P19541	446 aa	Known RBP	3.13	□□□□□ -1.91
PUT3	YKL015W	ESL2	P36168	1195 aa		3.13	□□□□□ -1.91
PUT3	YKL015W	TAF5	P38129	798 aa		3.13	□□□□□ -1.91
PUT3	YKL015W	NUP85	P46673	744 aa		3.13	□□□□□ -1.91
PUT3	YKL015W	MRX10	Q05648	414 aa		3.13	□□□□□ -1.91
PUT3	YKL015W	LCB5	Q06147	687 aa	Known RBP	3.13	□□□□□ -1.91
PUT3	YKL015W	HAL5	P38970	855 aa	Known RBP	3.13	□□□□□ -1.91
PUT3	YKL015W	SLM3	Q12093	417 aa		3.13	□□□□□ -1.91
PUT3	YKL015W	ENO1	P00924	437 aa	Known RBP	3.12	□□□□□ -1.91
PUT3	YKL015W	UTP22	P53254	1237 aa	Predicted RBP	3.12	□□□□□ -1.91
PUT3	YKL015W	OPT2	Q06593	877 aa		3.12	□□□□□ -1.91
PUT3	YKL015W	POM152	P39685	1337 aa		3.12	□□□□□ -1.91
PUT3	YKL015W	SSM4	P40318	1319 aa		3.12	□□□□□ -1.91
PUT3	YKL015W	YKR075C	P36155	307 aa		3.11	□□□□□ -1.91
PUT3	YKL015W	UTP13	Q05946	817 aa	Known RBP	3.11	□□□□□ -1.91
PUT3	YKL015W	MHP1	P43638	1398 aa		3.1	□□□□□ -1.91
PUT3	YKL015W	UTP7	P40055	554 aa	Known RBP	3.1	□□□□□ -1.91
PUT3	YKL015W	YJR098C	P47139	656 aa		3.1	□□□□□ -1.91
PUT3	YKL015W	MEC3	Q02574	474 aa		3.1	□□□□□ -1.91
PUT3	YKL015W	RIM15	P43565	1770 aa		3.1	□□□□□ -1.91
PUT3	YKL015W	YFL034W	P43564	1073 aa		3.1	□□□□□ -1.91
PUT3	YKL015W	MTR4	P47047	1073 aa	Known RBP	3.1	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms