RNA–Protein interactions for RNA: YGR271C-A

EFG1, Essential protein required for maturation of 18S rRNA, yeastyeast

Gene EFG1, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EFG1YGR271C-A LSB3P43603 459 aaKnown RBP6.47□□□□□ -1.37
EFG1YGR271C-A CWH41P53008 833 aa6.47□□□□□ -1.37
EFG1YGR271C-A PUF6Q04373 656 aaKnown RBP6.47□□□□□ -1.37
EFG1YGR271C-A MRPL33P20084 86 aa6.45□□□□□ -1.38
EFG1YGR271C-A MET1P36150 593 aa6.45□□□□□ -1.38
EFG1YGR271C-A NCL1P38205 684 aaKnown RBP6.45□□□□□ -1.38
EFG1YGR271C-A QDR2P40474 542 aa6.45□□□□□ -1.38
EFG1YGR271C-A SSA4P22202 642 aaKnown RBP6.44□□□□□ -1.38
EFG1YGR271C-A YBR197CP38306 217 aa6.44□□□□□ -1.38
EFG1YGR271C-A APM2P38700 605 aa6.44□□□□□ -1.38
EFG1YGR271C-A YNR014WP53719 212 aa6.44□□□□□ -1.38
EFG1YGR271C-A YCK2P23292 546 aaKnown RBP6.43□□□□□ -1.38
EFG1YGR271C-A BOI2P39969 1040 aa6.43□□□□□ -1.38
EFG1YGR271C-A YER156CP40093 338 aaKnown RBP6.43□□□□□ -1.38
EFG1YGR271C-A YNR040WP53736 256 aa6.43□□□□□ -1.38
EFG1YGR271C-A YMR187CQ03236 431 aa6.43□□□□□ -1.38
EFG1YGR271C-A CWC15Q03772 175 aaKnown RBP6.43□□□□□ -1.38
EFG1YGR271C-A NOB1Q08444 459 aaKnown RBP6.43□□□□□ -1.38
EFG1YGR271C-A YDR215CQ12240 137 aa6.43□□□□□ -1.38
EFG1YGR271C-A VMA3P25515 160 aa6.42□□□□□ -1.38
EFG1YGR271C-A ALD4P46367 519 aaKnown RBP6.42□□□□□ -1.38
EFG1YGR271C-A SRS2P12954 1174 aa6.41□□□□□ -1.38
EFG1YGR271C-A ITC1P53125 1264 aa6.41□□□□□ -1.38
EFG1YGR271C-A YML083CQ04526 418 aa6.41□□□□□ -1.38
EFG1YGR271C-A YOR296WQ08748 1289 aa6.41□□□□□ -1.38
EFG1YGR271C-A IDI1P15496 288 aa6.4□□□□□ -1.38
EFG1YGR271C-A DYS1P38791 387 aa6.4□□□□□ -1.38
EFG1YGR271C-A FOX2Q02207 900 aaKnown RBP6.4□□□□□ -1.38
EFG1YGR271C-A NAB2P32505 525 aaKnown RBP RIP-Chip data6.39□□□□□ -1.39not detected
EFG1YGR271C-A GIS4Q04233 774 aa6.39□□□□□ -1.39
EFG1YGR271C-A NAR1P23503 491 aaKnown RBP6.38□□□□□ -1.39
EFG1YGR271C-A ISC10P32645 267 aa6.38□□□□□ -1.39
EFG1YGR271C-A GIP1P38229 639 aa6.37□□□□□ -1.39
EFG1YGR271C-A TPS3P38426 1054 aaKnown RBP6.37□□□□□ -1.39
EFG1YGR271C-A NHA1Q99271 985 aa6.37□□□□□ -1.39
EFG1YGR271C-A KTR2P33550 425 aa6.36□□□□□ -1.39
EFG1YGR271C-A PGM2P37012 569 aaKnown RBP6.36□□□□□ -1.39
EFG1YGR271C-A LDH1P38139 375 aa6.36□□□□□ -1.39
EFG1YGR271C-A BSD2P38356 321 aa6.36□□□□□ -1.39
EFG1YGR271C-A PUN1Q06991 263 aa6.36□□□□□ -1.39
EFG1YGR271C-A APC11Q12157 165 aa6.36□□□□□ -1.39
EFG1YGR271C-A RLF2Q12495 606 aa6.36□□□□□ -1.39
EFG1YGR271C-A ALG14P38242 237 aa6.35□□□□□ -1.39
EFG1YGR271C-A SLN1P39928 1220 aaPredicted RBP6.35□□□□□ -1.39
EFG1YGR271C-A MRP10O75012 95 aa6.34□□□□□ -1.39
EFG1YGR271C-A SUB2Q07478 446 aaKnown RBP6.34□□□□□ -1.39
EFG1YGR271C-A ISW1P38144 1129 aa6.33□□□□□ -1.4
EFG1YGR271C-A SLP1Q12232 587 aa6.33□□□□□ -1.4
EFG1YGR271C-A MSN1P22148 382 aa6.32□□□□□ -1.4
EFG1YGR271C-A AMN1P38285 549 aaPredicted RBP6.32□□□□□ -1.4
EFG1YGR271C-A YIL165CP40446 119 aa6.32□□□□□ -1.4
EFG1YGR271C-A BUD9P53226 547 aa6.32□□□□□ -1.4
EFG1YGR271C-A PNP1Q05788 311 aa6.32□□□□□ -1.4
EFG1YGR271C-A LSO1Q3E827 93 aa6.32□□□□□ -1.4
EFG1YGR271C-A BOI1P38041 980 aaKnown RBP6.31□□□□□ -1.4
EFG1YGR271C-A RSC2Q06488 889 aa6.3□□□□□ -1.4
EFG1YGR271C-A AI3P03877 415 aa6.29□□□□□ -1.4
EFG1YGR271C-A HXT8P40886 569 aa6.29□□□□□ -1.4
EFG1YGR271C-A PRY1P47032 299 aa6.29□□□□□ -1.4
EFG1YGR271C-A MCA1Q08601 432 aa6.29□□□□□ -1.4
EFG1YGR271C-A TAT1P38085 619 aa6.28□□□□□ -1.4
EFG1YGR271C-A EMG1Q06287 252 aaKnown RBP6.28□□□□□ -1.4
EFG1YGR271C-A PGM1P33401 570 aaKnown RBP6.27□□□□□ -1.41
EFG1YGR271C-A RGD2P43556 714 aa6.27□□□□□ -1.41
EFG1YGR271C-A PPT1P53043 513 aa6.27□□□□□ -1.41
EFG1YGR271C-A SFA1P32771 386 aa6.26□□□□□ -1.41
EFG1YGR271C-A RRN6P32786 894 aa6.26□□□□□ -1.41
EFG1YGR271C-A BOL3P39724 118 aa6.26□□□□□ -1.41
EFG1YGR271C-A NTA1P40354 457 aa6.26□□□□□ -1.41
EFG1YGR271C-A LSB6P42951 607 aa6.26□□□□□ -1.41
EFG1YGR271C-A YPL034WQ03083 165 aa6.26□□□□□ -1.41
EFG1YGR271C-A RPB10P22139 70 aa6.25□□□□□ -1.41
EFG1YGR271C-A YBR287WP38355 427 aa6.25□□□□□ -1.41
EFG1YGR271C-A RRM3P38766 723 aa6.24□□□□□ -1.41
EFG1YGR271C-A SOG2Q08817 791 aa6.24□□□□□ -1.41
EFG1YGR271C-A INP51P40559 946 aaKnown RBP6.23□□□□□ -1.41
EFG1YGR271C-A ARI1P53111 347 aaKnown RBP6.23□□□□□ -1.41
EFG1YGR271C-A ALD3P54114 506 aa6.23□□□□□ -1.41
EFG1YGR271C-A FUS1P11710 512 aa6.22□□□□□ -1.41
EFG1YGR271C-A TFA2P36145 328 aa6.22□□□□□ -1.41
EFG1YGR271C-A FIR1P40020 876 aa6.22□□□□□ -1.41
EFG1YGR271C-A BIO5P53744 561 aaKnown RBP6.22□□□□□ -1.41
EFG1YGR271C-A GAS5Q08193 484 aa6.22□□□□□ -1.41
EFG1YGR271C-A TY4B-PA0A0B7P3V8 1104 aa6.21□□□□□ -1.42
EFG1YGR271C-A SAC7P17121 654 aa6.21□□□□□ -1.42
EFG1YGR271C-A SMC1P32908 1225 aa6.21□□□□□ -1.42
EFG1YGR271C-A AIM46P38885 310 aa6.21□□□□□ -1.42
EFG1YGR271C-A GIP2P40036 548 aa6.21□□□□□ -1.42
EFG1YGR271C-A TY4A-HQ6Q5P6 413 aa6.21□□□□□ -1.42
EFG1YGR271C-A HVG1P0CE11 249 aa6.2□□□□□ -1.42
EFG1YGR271C-A TED1P40533 473 aa6.2□□□□□ -1.42
EFG1YGR271C-A LEM3P42838 414 aa6.2□□□□□ -1.42
EFG1YGR271C-A SUT1P53032 299 aaKnown RBP6.2□□□□□ -1.42
EFG1YGR271C-A GUP1P53154 560 aa6.2□□□□□ -1.42
EFG1YGR271C-A TIF6Q12522 245 aaKnown RBP6.2□□□□□ -1.42
EFG1YGR271C-A FUR4P05316 633 aaKnown RBP6.19□□□□□ -1.42
EFG1YGR271C-A IRS4P36115 615 aaKnown RBP6.19□□□□□ -1.42
EFG1YGR271C-A RAD55P38953 406 aa6.19□□□□□ -1.42
EFG1YGR271C-A SOK2P53438 785 aaPredicted RBP6.19□□□□□ -1.42
EFG1YGR271C-A TY1A-NL1Q12391 440 aaKnown RBP6.19□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 63.4 ms