RNA–Protein interactions for RNA: YGL029W

CGR1, Protein involved in nucleolar integrity and processing of pre-rRNA, yeast

Gene CGR1, Length 363 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CGR1	YGL029W	YHL050C	P38721	697 aa		4.86	□□□□□ -1.63
CGR1	YGL029W	YHR219W	P38900	624 aa		4.86	□□□□□ -1.63
CGR1	YGL029W	KTR7	P40504	517 aa		4.86	□□□□□ -1.63
CGR1	YGL029W	INP52	P50942	1183 aa		4.86	□□□□□ -1.63
CGR1	YGL029W	IRE1	P32361	1115 aa		4.85	□□□□□ -1.63
CGR1	YGL029W	UTR2	P32623	467 aa		4.85	□□□□□ -1.63
CGR1	YGL029W	OMA1	P36163	345 aa		4.85	□□□□□ -1.63
CGR1	YGL029W	JJJ2	P46997	583 aa		4.85	□□□□□ -1.63
CGR1	YGL029W	KAR5	Q04746	504 aa		4.85	□□□□□ -1.63
CGR1	YGL029W	ISR1	Q06098	443 aa	Known RBP	4.85	□□□□□ -1.63
CGR1	YGL029W	STB3	Q12427	513 aa		4.85	□□□□□ -1.63
CGR1	YGL029W	ISF1	P32488	338 aa		4.84	□□□□□ -1.63
CGR1	YGL029W	BOL3	P39724	118 aa		4.84	□□□□□ -1.63
CGR1	YGL029W	ATG1	P53104	897 aa		4.84	□□□□□ -1.63
CGR1	YGL029W	TY1A-DR2	Q03964	440 aa	Known RBP	4.84	□□□□□ -1.63
CGR1	YGL029W	PHO87	P25360	923 aa		4.83	□□□□□ -1.64
CGR1	YGL029W	GRS1	P38088	690 aa	Known RBP	4.83	□□□□□ -1.64
CGR1	YGL029W	ALA1	P40825	983 aa	Known RBP	4.83	□□□□□ -1.64
CGR1	YGL029W	APL6	P46682	809 aa		4.83	□□□□□ -1.64
CGR1	YGL029W	POL32	P47110	350 aa		4.83	□□□□□ -1.64
CGR1	YGL029W	DOS2	P54858	310 aa		4.83	□□□□□ -1.64
CGR1	YGL029W	SVF1	Q05515	481 aa		4.83	□□□□□ -1.64
CGR1	YGL029W	PSH1	Q12161	406 aa		4.83	□□□□□ -1.64
CGR1	YGL029W	EMP47	P43555	445 aa		4.82	□□□□□ -1.64
CGR1	YGL029W	SUM1	P46676	1062 aa		4.82	□□□□□ -1.64
CGR1	YGL029W	ROM1	P53046	1155 aa		4.82	□□□□□ -1.64
CGR1	YGL029W	PUF6	Q04373	656 aa	Known RBP	4.82	□□□□□ -1.64
CGR1	YGL029W	PDC6	P26263	563 aa	Known RBP	4.81	□□□□□ -1.64
CGR1	YGL029W	SPR3	P41901	512 aa		4.81	□□□□□ -1.64
CGR1	YGL029W	ACS2	P52910	683 aa	Known RBP	4.81	□□□□□ -1.64
CGR1	YGL029W	TBS1	P38114	1094 aa		4.8	□□□□□ -1.64
CGR1	YGL029W	YJR107W	P47145	328 aa		4.8	□□□□□ -1.64
CGR1	YGL029W	FPR4	Q06205	392 aa	Predicted RBP	4.8	□□□□□ -1.64
CGR1	YGL029W	NUT2	Q06213	157 aa		4.8	□□□□□ -1.64
CGR1	YGL029W	HAP4	P14064	554 aa		4.79	□□□□□ -1.64
CGR1	YGL029W	SPC42	P36094	363 aa		4.79	□□□□□ -1.64
CGR1	YGL029W	BRN1	P38170	754 aa		4.79	□□□□□ -1.64
CGR1	YGL029W	HAL5	P38970	855 aa	Known RBP	4.79	□□□□□ -1.64
CGR1	YGL029W	PNP1	Q05788	311 aa		4.79	□□□□□ -1.64
CGR1	YGL029W	UTP13	Q05946	817 aa	Known RBP	4.79	□□□□□ -1.64
CGR1	YGL029W	FRT1	Q99332	602 aa		4.79	□□□□□ -1.64
CGR1	YGL029W	SRS2	P12954	1174 aa		4.78	□□□□□ -1.64
CGR1	YGL029W	AVT1	P47082	602 aa		4.78	□□□□□ -1.64
CGR1	YGL029W	NNF1	P47149	201 aa		4.78	□□□□□ -1.64
CGR1	YGL029W	MAG2	Q06436	670 aa	Known RBP	4.78	□□□□□ -1.64
CGR1	YGL029W	GAS4	Q08271	471 aa		4.78	□□□□□ -1.64
CGR1	YGL029W	RPS31	P05759	152 aa	Known RBP	4.77	□□□□□ -1.65
CGR1	YGL029W	MET4	P32389	672 aa		4.77	□□□□□ -1.65
CGR1	YGL029W	SEC8	P32855	1065 aa		4.77	□□□□□ -1.65
CGR1	YGL029W	MSC7	P38694	644 aa		4.77	□□□□□ -1.65
CGR1	YGL029W	ATG3	P40344	310 aa		4.77	□□□□□ -1.65
CGR1	YGL029W	ALD4	P46367	519 aa	Known RBP	4.77	□□□□□ -1.65
CGR1	YGL029W	ACF4	P47129	309 aa		4.77	□□□□□ -1.65
CGR1	YGL029W	FAR11	P53917	953 aa		4.77	□□□□□ -1.65
CGR1	YGL029W	OYE2	Q03558	400 aa	Known RBP	4.77	□□□□□ -1.65
CGR1	YGL029W	SOH1	P38633	127 aa		4.76	□□□□□ -1.65
CGR1	YGL029W	QDR1	P40475	563 aa		4.76	□□□□□ -1.65
CGR1	YGL029W	BUD9	P53226	547 aa		4.76	□□□□□ -1.65
CGR1	YGL029W	SUV3	P32580	737 aa		4.75	□□□□□ -1.65
CGR1	YGL029W	GLO3	P38682	493 aa	Known RBP	4.75	□□□□□ -1.65
CGR1	YGL029W	FYV10	P40492	516 aa		4.75	□□□□□ -1.65
CGR1	YGL029W	THI12	P42883	340 aa		4.74	□□□□□ -1.65
CGR1	YGL029W	THI5	P43534	340 aa		4.74	□□□□□ -1.65
CGR1	YGL029W	THI11	P47183	340 aa		4.74	□□□□□ -1.65
CGR1	YGL029W	PUN1	Q06991	263 aa		4.74	□□□□□ -1.65
CGR1	YGL029W	THI13	Q07748	340 aa		4.74	□□□□□ -1.65
CGR1	YGL029W	LSO1	Q3E827	93 aa		4.74	□□□□□ -1.65
CGR1	YGL029W	TSC13	Q99190	310 aa		4.74	□□□□□ -1.65
CGR1	YGL029W	FUR4	P05316	633 aa	Known RBP	4.73	□□□□□ -1.65
CGR1	YGL029W	UBP1	P25037	809 aa		4.73	□□□□□ -1.65
CGR1	YGL029W	BOI1	P38041	980 aa	Known RBP	4.73	□□□□□ -1.65
CGR1	YGL029W	NMD2	P38798	1089 aa	Known RBP	4.73	□□□□□ -1.65
CGR1	YGL029W	MGE1	P38523	228 aa		4.72	□□□□□ -1.65
CGR1	YGL029W	YAF9	P53930	226 aa		4.72	□□□□□ -1.65
CGR1	YGL029W	JIP5	Q06214	492 aa	Predicted RBP	4.72	□□□□□ -1.65
CGR1	YGL029W	MNL2	Q12205	849 aa		4.72	□□□□□ -1.65
CGR1	YGL029W	YOL098C	Q12496	1037 aa		4.72	□□□□□ -1.65
CGR1	YGL029W	TRS33	Q99394	268 aa		4.72	□□□□□ -1.65
CGR1	YGL029W	LEU1	P07264	779 aa	Known RBP	4.71	□□□□□ -1.66
CGR1	YGL029W	PDI1	P17967	522 aa	Known RBP	4.71	□□□□□ -1.66
CGR1	YGL029W	VAN1	P23642	535 aa		4.71	□□□□□ -1.66
CGR1	YGL029W	PGM1	P33401	570 aa	Known RBP	4.71	□□□□□ -1.66
CGR1	YGL029W	PGM2	P37012	569 aa	Known RBP	4.71	□□□□□ -1.66
CGR1	YGL029W	HDA3	Q06623	655 aa		4.71	□□□□□ -1.66
CGR1	YGL029W	GPI13	Q07830	1017 aa		4.71	□□□□□ -1.66
CGR1	YGL029W	NHA1	Q99271	985 aa		4.71	□□□□□ -1.66
CGR1	YGL029W	ALD3	P54114	506 aa		4.7	□□□□□ -1.66
CGR1	YGL029W	TRS120	Q04183	1289 aa		4.7	□□□□□ -1.66
CGR1	YGL029W	PHO4	P07270	312 aa	Known RBP	4.69	□□□□□ -1.66
CGR1	YGL029W	ALG14	P38242	237 aa		4.69	□□□□□ -1.66
CGR1	YGL029W	AIM9	P40053	627 aa	Known RBP	4.69	□□□□□ -1.66
CGR1	YGL029W	IOC3	P43596	787 aa		4.69	□□□□□ -1.66
CGR1	YGL029W	VPS16	Q03308	798 aa		4.69	□□□□□ -1.66
CGR1	YGL029W	YPQ2	Q06328	317 aa		4.69	□□□□□ -1.66
CGR1	YGL029W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.69	□□□□□ -1.66	not detected
CGR1	YGL029W	APC11	Q12157	165 aa		4.69	□□□□□ -1.66
CGR1	YGL029W	AI3	P03877	415 aa		4.68	□□□□□ -1.66
CGR1	YGL029W	KTR2	P33550	425 aa		4.68	□□□□□ -1.66
CGR1	YGL029W	YFL034W	P43564	1073 aa		4.68	□□□□□ -1.66
CGR1	YGL029W	GAS5	Q08193	484 aa		4.68	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 105.7 ms