RNA–Protein interactions for RNA: YGL006W

PMC1, Transcript of Vacuolar Ca2+ ATPase involved in depleting cytosol of Ca2+ ions, yeast

Gene PMC1, Length 3,522 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PMC1	YGL006W	RGP1	P16664	663 aa		4.79	□□□□□ -1.64
PMC1	YGL006W	HOT1	Q03213	719 aa		4.79	□□□□□ -1.64
PMC1	YGL006W	HAP1	P0CE41	1502 aa		4.78	□□□□□ -1.64
PMC1	YGL006W	AOS1	Q06624	347 aa		4.78	□□□□□ -1.64
PMC1	YGL006W	OMS1	Q06668	471 aa		4.78	□□□□□ -1.64
PMC1	YGL006W	CDC60	P26637	1090 aa	Known RBP	4.78	□□□□□ -1.64
PMC1	YGL006W	AAP1	P37898	856 aa	Known RBP	4.78	□□□□□ -1.64
PMC1	YGL006W	COG4	Q06096	861 aa		4.78	□□□□□ -1.64
PMC1	YGL006W	MBR1	P23493	339 aa		4.77	□□□□□ -1.65
PMC1	YGL006W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.77	□□□□□ -1.65	not detected
PMC1	YGL006W	SIP3	P38717	1229 aa		4.77	□□□□□ -1.65
PMC1	YGL006W	NSE3	Q05541	303 aa		4.77	□□□□□ -1.65
PMC1	YGL006W	SEC7	P11075	2009 aa	Known RBP	4.77	□□□□□ -1.65
PMC1	YGL006W	PDC1	P06169	563 aa	Known RBP	4.77	□□□□□ -1.65
PMC1	YGL006W	MIF2	P35201	549 aa		4.77	□□□□□ -1.65
PMC1	YGL006W	ECM21	P38167	1117 aa	Known RBP	4.77	□□□□□ -1.65
PMC1	YGL006W	HYR1	P40581	163 aa	Known RBP	4.77	□□□□□ -1.65
PMC1	YGL006W	PKH1	Q03407	766 aa		4.77	□□□□□ -1.65
PMC1	YGL006W	YCG1	Q06680	1035 aa		4.77	□□□□□ -1.65
PMC1	YGL006W	PUS1	Q12211	544 aa	Known RBP	4.77	□□□□□ -1.65
PMC1	YGL006W	STO1	P34160	861 aa	Known RBP	4.77	□□□□□ -1.65
PMC1	YGL006W	EPL1	P43572	832 aa		4.77	□□□□□ -1.65
PMC1	YGL006W	YGL242C	P53066	181 aa		4.77	□□□□□ -1.65
PMC1	YGL006W	HCR1	Q05775	265 aa	Known RBP	4.77	□□□□□ -1.65
PMC1	YGL006W	SAP190	P36123	1033 aa		4.76	□□□□□ -1.65
PMC1	YGL006W	RGD1	P38339	666 aa		4.76	□□□□□ -1.65
PMC1	YGL006W	MRPS35	P53292	345 aa		4.76	□□□□□ -1.65
PMC1	YGL006W	RPO41	P13433	1351 aa	Known RBP	4.76	□□□□□ -1.65
PMC1	YGL006W	RAD1	P06777	1100 aa		4.76	□□□□□ -1.65
PMC1	YGL006W	MAL33	P38157	468 aa		4.76	□□□□□ -1.65
PMC1	YGL006W	SEC9	P40357	651 aa		4.76	□□□□□ -1.65
PMC1	YGL006W	BRE1	Q07457	700 aa	Known RBP	4.76	□□□□□ -1.65
PMC1	YGL006W	ELG1	Q12050	791 aa		4.76	□□□□□ -1.65
PMC1	YGL006W	SWI1	P09547	1314 aa		4.76	□□□□□ -1.65
PMC1	YGL006W	CPS1	P27614	576 aa		4.76	□□□□□ -1.65
PMC1	YGL006W	SEC65	P29478	273 aa		4.76	□□□□□ -1.65
PMC1	YGL006W	SRP40	P32583	406 aa	Predicted RBP	4.76	□□□□□ -1.65
PMC1	YGL006W	SIC1	P38634	284 aa		4.76	□□□□□ -1.65
PMC1	YGL006W	TFG2	P41896	400 aa	Predicted RBP	4.76	□□□□□ -1.65
PMC1	YGL006W	PIB2	P53191	635 aa		4.76	□□□□□ -1.65
PMC1	YGL006W	BCK1	Q01389	1478 aa		4.76	□□□□□ -1.65
PMC1	YGL006W	RPA190	P10964	1664 aa	Known RBP	4.75	□□□□□ -1.65
PMC1	YGL006W	HXK1	P04806	485 aa	Known RBP	4.75	□□□□□ -1.65
PMC1	YGL006W	CDC16	P09798	840 aa		4.75	□□□□□ -1.65
PMC1	YGL006W	BOI2	P39969	1040 aa		4.75	□□□□□ -1.65
PMC1	YGL006W	YKE2	P52553	114 aa		4.75	□□□□□ -1.65
PMC1	YGL006W	ALE1	Q08548	619 aa		4.75	□□□□□ -1.65
PMC1	YGL006W	NUP192	P47054	1683 aa		4.75	□□□□□ -1.65
PMC1	YGL006W	UBC1	P21734	215 aa	Known RBP	4.75	□□□□□ -1.65
PMC1	YGL006W	GSY2	P27472	705 aa		4.75	□□□□□ -1.65
PMC1	YGL006W	ECM32	P32644	1121 aa	Known RBP	4.75	□□□□□ -1.65
PMC1	YGL006W	ATG23	Q06671	453 aa		4.75	□□□□□ -1.65
PMC1	YGL006W	TMA16	Q08687	178 aa		4.75	□□□□□ -1.65
PMC1	YGL006W	CHC1	P22137	1653 aa	Known RBP	4.75	□□□□□ -1.65
PMC1	YGL006W	MPE1	P35728	441 aa	Known RBP	4.75	□□□□□ -1.65
PMC1	YGL006W	YMR124W	P39523	943 aa	Known RBP	4.75	□□□□□ -1.65
PMC1	YGL006W	AIM9	P40053	627 aa	Known RBP	4.74	□□□□□ -1.65
PMC1	YGL006W	AFT2	Q08957	416 aa		4.74	□□□□□ -1.65
PMC1	YGL006W	ATG9	Q12142	997 aa		4.74	□□□□□ -1.65
PMC1	YGL006W	MCM16	Q12262	181 aa		4.74	□□□□□ -1.65
PMC1	YGL006W	ELM1	P32801	640 aa		4.74	□□□□□ -1.65
PMC1	YGL006W	SEC26	P41810	973 aa	Known RBP	4.74	□□□□□ -1.65
PMC1	YGL006W	NNF2	P53253	936 aa		4.74	□□□□□ -1.65
PMC1	YGL006W	MDM38	Q08179	573 aa		4.74	□□□□□ -1.65
PMC1	YGL006W	RRP6	Q12149	733 aa	Known RBP	4.74	□□□□□ -1.65
PMC1	YGL006W	DDP1	Q99321	188 aa	Known RBP	4.74	□□□□□ -1.65
PMC1	YGL006W	CCT4	P39078	528 aa	Known RBP	4.73	□□□□□ -1.65
PMC1	YGL006W	CAF130	P53280	1122 aa	Predicted RBP	4.73	□□□□□ -1.65
PMC1	YGL006W	VPS75	P53853	264 aa		4.73	□□□□□ -1.65
PMC1	YGL006W	ATG36	P46983	293 aa		4.73	□□□□□ -1.65
PMC1	YGL006W	HUL5	P53119	910 aa		4.73	□□□□□ -1.65
PMC1	YGL006W	MLC1	P53141	149 aa		4.73	□□□□□ -1.65
PMC1	YGL006W	ALO1	P54783	526 aa	Known RBP	4.73	□□□□□ -1.65
PMC1	YGL006W	DNM1	P54861	757 aa		4.73	□□□□□ -1.65
PMC1	YGL006W	PSR2	Q07949	397 aa		4.73	□□□□□ -1.65
PMC1	YGL006W	CDC37	P06101	506 aa	Known RBP	4.72	□□□□□ -1.65
PMC1	YGL006W	PET111	P08468	800 aa		4.72	□□□□□ -1.65
PMC1	YGL006W	GCD7	P32502	381 aa	Predicted RBP	4.72	□□□□□ -1.65
PMC1	YGL006W	YOL057W	Q08225	711 aa		4.72	□□□□□ -1.65
PMC1	YGL006W	KTR1	P27810	393 aa	Known RBP	4.72	□□□□□ -1.65
PMC1	YGL006W	HEL1	P36113	551 aa		4.72	□□□□□ -1.65
PMC1	YGL006W	YMR147W	P40218	223 aa	Known RBP	4.72	□□□□□ -1.65
PMC1	YGL006W	FYV8	P46949	817 aa	Known RBP	4.72	□□□□□ -1.65
PMC1	YGL006W	MAK11	P20484	414 aa	Known RBP	4.72	□□□□□ -1.65
PMC1	YGL006W	YKT6	P36015	200 aa	Known RBP	4.72	□□□□□ -1.65
PMC1	YGL006W	SPO19	Q03029	223 aa		4.72	□□□□□ -1.65
PMC1	YGL006W	YLR001C	Q07895	862 aa		4.72	□□□□□ -1.65
PMC1	YGL006W	NKP1	Q12493	238 aa		4.72	□□□□□ -1.65
PMC1	YGL006W	RAD53	P22216	821 aa		4.71	□□□□□ -1.65
PMC1	YGL006W	MVP1	P40959	511 aa	Known RBP	4.71	□□□□□ -1.65
PMC1	YGL006W	CTK3	P46963	296 aa	Predicted RBP	4.71	□□□□□ -1.65
PMC1	YGL006W	SFH1	Q06168	426 aa		4.71	□□□□□ -1.65
PMC1	YGL006W	CSC1	Q06538	782 aa		4.71	□□□□□ -1.65
PMC1	YGL006W	PSK2	Q08217	1101 aa		4.71	□□□□□ -1.65
PMC1	YGL006W	YOL087C	Q99247	1116 aa		4.71	□□□□□ -1.65
PMC1	YGL006W	MTF2	P10849	440 aa		4.71	□□□□□ -1.66
PMC1	YGL006W	RPO26	P20435	155 aa		4.71	□□□□□ -1.66
PMC1	YGL006W	SPT5	P27692	1063 aa	Known RBP	4.71	□□□□□ -1.66
PMC1	YGL006W	PUP2	P32379	260 aa		4.71	□□□□□ -1.66
PMC1	YGL006W	HXT10	P43581	546 aa		4.71	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 6.8 ms