RNA–Protein interactions for RNA: YER118C

SHO1, Transcript of Transmembrane osmosensor for filamentous growth and HOG pathways, yeastyeast

Gene SHO1, Length 1,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHO1YER118C CWH41P53008 833 aa7.98□□□□□ -1.13
SHO1YER118C ATG16Q03818 150 aa7.98□□□□□ -1.13
SHO1YER118C FLC1Q08967 793 aa7.98□□□□□ -1.13
SHO1YER118C SLX4Q12098 748 aa7.98□□□□□ -1.13
SHO1YER118C APC11Q12157 165 aa7.98□□□□□ -1.13
SHO1YER118C YDL206WQ12424 762 aa7.98□□□□□ -1.13
SHO1YER118C ADR1P07248 1323 aa7.98□□□□□ -1.13
SHO1YER118C RPB10P22139 70 aa7.97□□□□□ -1.13
SHO1YER118C CDC11P32458 415 aa7.97□□□□□ -1.13
SHO1YER118C TYW3P53177 273 aa7.97□□□□□ -1.13
SHO1YER118C OPI10Q08202 246 aa7.97□□□□□ -1.13
SHO1YER118C CBC2Q08920 208 aaKnown RBP RIP-Chip data7.97□□□□□ -1.13not detected
SHO1YER118C HXK1P04806 485 aaKnown RBP7.96□□□□□ -1.14
SHO1YER118C IES1P43579 692 aa7.96□□□□□ -1.14
SHO1YER118C DAN4P47179 1161 aa7.96□□□□□ -1.14
SHO1YER118C YGR021WP53212 290 aa7.96□□□□□ -1.14
SHO1YER118C CDC55Q00362 526 aa7.96□□□□□ -1.14
SHO1YER118C TOS4Q06266 489 aa7.96□□□□□ -1.14
SHO1YER118C ERF2Q06551 359 aa7.96□□□□□ -1.14
SHO1YER118C BDS1Q08347 646 aa7.96□□□□□ -1.14
SHO1YER118C ERR1P0CX10 437 aa7.95□□□□□ -1.14
SHO1YER118C ERR2P0CX11 437 aa7.95□□□□□ -1.14
SHO1YER118C CDC34P14682 295 aa7.95□□□□□ -1.14
SHO1YER118C YBR197CP38306 217 aa7.95□□□□□ -1.14
SHO1YER118C RSP5P39940 809 aaKnown RBP7.95□□□□□ -1.14
SHO1YER118C AIM9P40053 627 aaKnown RBP7.95□□□□□ -1.14
SHO1YER118C HTA1P04911 132 aaKnown RBP7.94□□□□□ -1.14
SHO1YER118C HTA2P04912 132 aa7.94□□□□□ -1.14
SHO1YER118C ISC10P32645 267 aa7.94□□□□□ -1.14
SHO1YER118C YHL008CP38750 627 aa7.94□□□□□ -1.14
SHO1YER118C FAA3P39002 694 aa7.94□□□□□ -1.14
SHO1YER118C GTT3P39996 337 aa7.94□□□□□ -1.14
SHO1YER118C YNL011CP53980 444 aa7.94□□□□□ -1.14
SHO1YER118C TMA7Q3E764 64 aaKnown RBP7.94□□□□□ -1.14
SHO1YER118C RPL8AP17076 256 aaKnown RBP7.93□□□□□ -1.14
SHO1YER118C CIC1P38779 376 aaKnown RBP7.93□□□□□ -1.14
SHO1YER118C HAL5P38970 855 aaKnown RBP7.93□□□□□ -1.14
SHO1YER118C YGR053CP53234 283 aa7.93□□□□□ -1.14
SHO1YER118C MTC5Q03897 1148 aa7.93□□□□□ -1.14
SHO1YER118C ERP4Q12450 207 aa7.93□□□□□ -1.14
SHO1YER118C TMA17Q12513 150 aa7.93□□□□□ -1.14
SHO1YER118C ATP4P05626 244 aa7.92□□□□□ -1.14
SHO1YER118C NGR1P32831 672 aaKnown RBP7.92□□□□□ -1.14
SHO1YER118C RPS0AP32905 252 aaKnown RBP7.92□□□□□ -1.14
SHO1YER118C NTH2P35172 780 aa7.92□□□□□ -1.14
SHO1YER118C YKL069WP36088 180 aa7.92□□□□□ -1.14
SHO1YER118C DAS1P47005 663 aa7.92□□□□□ -1.14
SHO1YER118C RPA14P50106 137 aa7.92□□□□□ -1.14
SHO1YER118C NTG2Q08214 380 aa7.92□□□□□ -1.14
SHO1YER118C CYT1P07143 309 aa7.91□□□□□ -1.14
SHO1YER118C SFP1P32432 683 aa7.9□□□□□ -1.14
SHO1YER118C NFU1P32860 256 aa7.9□□□□□ -1.14
SHO1YER118C DUT1P33317 147 aa7.9□□□□□ -1.14
SHO1YER118C IES5P40060 125 aa7.9□□□□□ -1.14
SHO1YER118C MRPS18P42847 217 aa7.9□□□□□ -1.14
SHO1YER118C YFR016CP43597 1233 aaKnown RBP7.9□□□□□ -1.14
SHO1YER118C YPR097WQ06839 1073 aa7.9□□□□□ -1.14
SHO1YER118C NOC3Q07896 663 aaPredicted RBP7.9□□□□□ -1.14
SHO1YER118C MCD1Q12158 566 aa7.9□□□□□ -1.14
SHO1YER118C NYV1Q12255 253 aa7.9□□□□□ -1.14
SHO1YER118C CCP1P00431 361 aa7.89□□□□□ -1.15
SHO1YER118C PRE9P23638 258 aaKnown RBP7.89□□□□□ -1.15
SHO1YER118C MSH2P25847 964 aa7.89□□□□□ -1.15
SHO1YER118C KTR2P33550 425 aa7.89□□□□□ -1.15
SHO1YER118C MTC2P34246 357 aa7.89□□□□□ -1.15
SHO1YER118C GGA2P38817 585 aaKnown RBP7.89□□□□□ -1.15
SHO1YER118C RPS0BP46654 252 aaKnown RBP7.89□□□□□ -1.15
SHO1YER118C YGR125WP53273 1036 aa7.89□□□□□ -1.15
SHO1YER118C CAB1Q04430 367 aa7.89□□□□□ -1.15
SHO1YER118C YBL029C-AQ3E756 94 aa7.89□□□□□ -1.15
SHO1YER118C PIF1P07271 859 aa7.88□□□□□ -1.15
SHO1YER118C IXR1P33417 597 aa7.88□□□□□ -1.15
SHO1YER118C NIT1P40447 199 aa7.88□□□□□ -1.15
SHO1YER118C BDP1P46678 594 aa7.88□□□□□ -1.15
SHO1YER118C YJR120WP47157 116 aa7.88□□□□□ -1.15
SHO1YER118C STR2P47164 639 aa7.88□□□□□ -1.15
SHO1YER118C YGR237CP50089 785 aa7.88□□□□□ -1.15
SHO1YER118C SND1Q04007 877 aa7.88□□□□□ -1.15
SHO1YER118C HDA3Q06623 655 aa7.88□□□□□ -1.15
SHO1YER118C FAL1Q12099 399 aaKnown RBP7.88□□□□□ -1.15
SHO1YER118C CIT1P00890 479 aa7.87□□□□□ -1.15
SHO1YER118C CAN1P04817 590 aa7.87□□□□□ -1.15
SHO1YER118C HIR1P32479 840 aa7.87□□□□□ -1.15
SHO1YER118C VNX1P42839 908 aa7.87□□□□□ -1.15
SHO1YER118C SUT1P53032 299 aaKnown RBP7.87□□□□□ -1.15
SHO1YER118C ISR1Q06098 443 aaKnown RBP7.87□□□□□ -1.15
SHO1YER118C ATG13Q06628 738 aa7.87□□□□□ -1.15
SHO1YER118C OSH2Q12451 1283 aa7.87□□□□□ -1.15
SHO1YER118C RPS6AP0CX37 236 aaKnown RBP7.86□□□□□ -1.15
SHO1YER118C RPS6BP0CX38 236 aaPredicted RBP7.86□□□□□ -1.15
SHO1YER118C NUD1P32336 851 aa7.86□□□□□ -1.15
SHO1YER118C BLI1P35727 113 aa7.86□□□□□ -1.15
SHO1YER118C AGE1Q04412 482 aa7.86□□□□□ -1.15
SHO1YER118C SPO75Q07798 868 aa7.86□□□□□ -1.15
SHO1YER118C WSC3Q12215 556 aa7.86□□□□□ -1.15
SHO1YER118C YEF3P16521 1044 aaKnown RBP7.85□□□□□ -1.15
SHO1YER118C KIP2P28743 706 aa7.85□□□□□ -1.15
SHO1YER118C VID27P40157 782 aa7.85□□□□□ -1.15
SHO1YER118C YJR115WP47152 169 aa7.85□□□□□ -1.15
SHO1YER118C DAL4Q04895 635 aa7.85□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms