RNA–Protein interactions for RNA: YEL048C

TCA17, Transcript of Component of transport protein particle (TRAPP) complex II, yeastyeast

Gene TCA17, Length 459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TCA17YEL048C CUS1Q02554 436 aaPredicted RBP7.81□□□□□ -1.16
TCA17YEL048C GEF1P37020 779 aa7.8□□□□□ -1.16
TCA17YEL048C NCL1P38205 684 aaKnown RBP7.8□□□□□ -1.16
TCA17YEL048C SKP1P52286 194 aa7.8□□□□□ -1.16
TCA17YEL048C RPC31P17890 251 aa7.79□□□□□ -1.16
TCA17YEL048C HEH2Q03281 663 aa7.79□□□□□ -1.16
TCA17YEL048C APM2P38700 605 aa7.78□□□□□ -1.16
TCA17YEL048C TY1A-DR2Q03964 440 aaKnown RBP7.77□□□□□ -1.17
TCA17YEL048C AI1P03875 834 aa7.76□□□□□ -1.17
TCA17YEL048C KAR5Q04746 504 aa7.76□□□□□ -1.17
TCA17YEL048C YOR296WQ08748 1289 aa7.75□□□□□ -1.17
TCA17YEL048C GPM1P00950 247 aaKnown RBP7.74□□□□□ -1.17
TCA17YEL048C CDC3P32457 520 aaKnown RBP7.74□□□□□ -1.17
TCA17YEL048C GIP1P38229 639 aa7.74□□□□□ -1.17
TCA17YEL048C YBR287WP38355 427 aa7.74□□□□□ -1.17
TCA17YEL048C MSC7P38694 644 aa7.74□□□□□ -1.17
TCA17YEL048C FIR1P40020 876 aa7.74□□□□□ -1.17
TCA17YEL048C ISW1P38144 1129 aa7.73□□□□□ -1.17
TCA17YEL048C BOL3P39724 118 aa7.73□□□□□ -1.17
TCA17YEL048C HXT8P40886 569 aa7.73□□□□□ -1.17
TCA17YEL048C LSO1Q3E827 93 aa7.73□□□□□ -1.17
TCA17YEL048C SUT1P53032 299 aaKnown RBP7.72□□□□□ -1.17
TCA17YEL048C YNR040WP53736 256 aa7.72□□□□□ -1.17
TCA17YEL048C THI72Q08579 599 aa7.72□□□□□ -1.17
TCA17YEL048C PDC5P16467 563 aaKnown RBP7.71□□□□□ -1.18
TCA17YEL048C KNS1P32350 737 aaPredicted RBP7.71□□□□□ -1.18
TCA17YEL048C BSD2P38356 321 aa7.71□□□□□ -1.18
TCA17YEL048C MSN1P22148 382 aa7.7□□□□□ -1.18
TCA17YEL048C BOI1P38041 980 aaKnown RBP7.7□□□□□ -1.18
TCA17YEL048C NSG2P53898 299 aa7.7□□□□□ -1.18
TCA17YEL048C NAB2P32505 525 aaKnown RBP RIP-Chip data7.69□□□□□ -1.18not detected
TCA17YEL048C GLO3P38682 493 aaKnown RBP7.69□□□□□ -1.18
TCA17YEL048C ITC1P53125 1264 aa7.69□□□□□ -1.18
TCA17YEL048C APC11Q12157 165 aa7.69□□□□□ -1.18
TCA17YEL048C MET1P36150 593 aa7.68□□□□□ -1.18
TCA17YEL048C ICP55P40051 511 aa7.68□□□□□ -1.18
TCA17YEL048C YNR014WP53719 212 aa7.68□□□□□ -1.18
TCA17YEL048C RPB10P22139 70 aa7.67□□□□□ -1.18
TCA17YEL048C MDJ1P35191 511 aa7.67□□□□□ -1.18
TCA17YEL048C PRK1P40494 810 aa7.67□□□□□ -1.18
TCA17YEL048C RGA2Q06407 1009 aa7.67□□□□□ -1.18
TCA17YEL048C PHM7Q12252 991 aa7.67□□□□□ -1.18
TCA17YEL048C SMC1P32908 1225 aa7.66□□□□□ -1.18
TCA17YEL048C YER156CP40093 338 aaKnown RBP7.66□□□□□ -1.18
TCA17YEL048C QDR1P40475 563 aa7.66□□□□□ -1.18
TCA17YEL048C RSC2Q06488 889 aa7.66□□□□□ -1.18
TCA17YEL048C SBE2P42223 864 aaKnown RBP7.65□□□□□ -1.18
TCA17YEL048C ATG1P53104 897 aa7.65□□□□□ -1.18
TCA17YEL048C PUS1Q12211 544 aaKnown RBP7.65□□□□□ -1.18
TCA17YEL048C HAT1Q12341 374 aa7.65□□□□□ -1.18
TCA17YEL048C IDI1P15496 288 aa7.64□□□□□ -1.19
TCA17YEL048C BOI2P39969 1040 aa7.64□□□□□ -1.19
TCA17YEL048C AIM46P38885 310 aa7.63□□□□□ -1.19
TCA17YEL048C RAD55P38953 406 aa7.63□□□□□ -1.19
TCA17YEL048C YIL165CP40446 119 aa7.63□□□□□ -1.19
TCA17YEL048C ALG14P38242 237 aa7.62□□□□□ -1.19
TCA17YEL048C NTA1P40354 457 aa7.62□□□□□ -1.19
TCA17YEL048C YFL066CP43538 392 aa7.62□□□□□ -1.19
TCA17YEL048C KTR2P33550 425 aa7.61□□□□□ -1.19
TCA17YEL048C RGD2P43556 714 aa7.61□□□□□ -1.19
TCA17YEL048C ACF4P47129 309 aa7.61□□□□□ -1.19
TCA17YEL048C TDA6Q06466 467 aa7.61□□□□□ -1.19
TCA17YEL048C YBL113CQ7M4S9 792 aa7.61□□□□□ -1.19
TCA17YEL048C GRS1P38088 690 aaKnown RBP7.6□□□□□ -1.19
TCA17YEL048C PPT1P53043 513 aa7.6□□□□□ -1.19
TCA17YEL048C UFD2P54860 961 aa7.6□□□□□ -1.19
TCA17YEL048C EMG1Q06287 252 aaKnown RBP7.6□□□□□ -1.19
TCA17YEL048C NHA1Q99271 985 aa7.6□□□□□ -1.19
TCA17YEL048C IRS4P36115 615 aaKnown RBP7.59□□□□□ -1.19
TCA17YEL048C PGM2P37012 569 aaKnown RBP7.59□□□□□ -1.19
TCA17YEL048C ERP5P38819 212 aa7.58□□□□□ -1.2
TCA17YEL048C YJL181WP46987 611 aa7.58□□□□□ -1.2
TCA17YEL048C TIF6Q12522 245 aaKnown RBP7.58□□□□□ -1.2
TCA17YEL048C YPR053CQ6Q5F3 151 aa7.58□□□□□ -1.2
TCA17YEL048C TRL1P09880 827 aaKnown RBP7.57□□□□□ -1.2
TCA17YEL048C PSY2P40164 858 aa7.57□□□□□ -1.2
TCA17YEL048C YMR187CQ03236 431 aa7.57□□□□□ -1.2
TCA17YEL048C MTC5Q03897 1148 aa7.57□□□□□ -1.2
TCA17YEL048C GIS4Q04233 774 aa7.57□□□□□ -1.2
TCA17YEL048C MRP10O75012 95 aa7.56□□□□□ -1.2
TCA17YEL048C NAR1P23503 491 aaKnown RBP7.56□□□□□ -1.2
TCA17YEL048C MCX1P38323 520 aaPredicted RBP7.56□□□□□ -1.2
TCA17YEL048C TRS120Q04183 1289 aa7.55□□□□□ -1.2
TCA17YEL048C MDJ2P42834 146 aa7.53□□□□□ -1.2
TCA17YEL048C SLP1Q12232 587 aa7.53□□□□□ -1.2
TCA17YEL048C INP51P40559 946 aaKnown RBP7.52□□□□□ -1.21
TCA17YEL048C FUS1P11710 512 aa7.51□□□□□ -1.21
TCA17YEL048C SSF1P38789 453 aaPredicted RBP7.51□□□□□ -1.21
TCA17YEL048C YNL011CP53980 444 aa7.51□□□□□ -1.21
TCA17YEL048C ECM2P38241 364 aaKnown RBP7.5□□□□□ -1.21
TCA17YEL048C SOK2P53438 785 aaPredicted RBP7.5□□□□□ -1.21
TCA17YEL048C GIP2P40036 548 aa7.49□□□□□ -1.21
TCA17YEL048C RSC4Q02206 625 aa7.49□□□□□ -1.21
TCA17YEL048C SKN7P38889 622 aa7.48□□□□□ -1.21
TCA17YEL048C BIO5P53744 561 aaKnown RBP7.48□□□□□ -1.21
TCA17YEL048C NUT2Q06213 157 aa7.48□□□□□ -1.21
TCA17YEL048C PYC2P32327 1180 aaKnown RBP7.47□□□□□ -1.21
TCA17YEL048C TAT1P38085 619 aa7.47□□□□□ -1.21
TCA17YEL048C RRM3P38766 723 aa7.47□□□□□ -1.21
TCA17YEL048C TED1P40533 473 aa7.47□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 34.8 ms