RNA–Protein interactions for RNA: YDL182W

LYS20, Transcript of Homocitrate synthase isozyme, yeastyeast

Gene LYS20, Length 1,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LYS20YDL182W MTC3P53077 123 aa10.27□□□□□ -0.77
LYS20YDL182W SRC1Q03707 834 aa10.27□□□□□ -0.77
LYS20YDL182W ARG82P07250 355 aa10.26□□□□□ -0.77
LYS20YDL182W RPS7AP26786 190 aaKnown RBP10.26□□□□□ -0.77
LYS20YDL182W BOI2P39969 1040 aa10.26□□□□□ -0.77
LYS20YDL182W YPP1P46951 817 aa10.26□□□□□ -0.77
LYS20YDL182W SEN54Q02825 467 aaPredicted RBP10.25□□□□□ -0.77
LYS20YDL182W CSI1Q04368 295 aa10.25□□□□□ -0.77
LYS20YDL182W NOP8Q08287 484 aaPredicted RBP10.25□□□□□ -0.77
LYS20YDL182W WRS1Q12109 432 aaKnown RBP10.25□□□□□ -0.77
LYS20YDL182W CSR2Q12734 1121 aa10.25□□□□□ -0.77
LYS20YDL182W ADR1P07248 1323 aa10.25□□□□□ -0.77
LYS20YDL182W SNU66Q12420 587 aaPredicted RBP10.24□□□□□ -0.77
LYS20YDL182W RVB2Q12464 471 aaKnown RBP10.24□□□□□ -0.77
LYS20YDL182W TIF6Q12522 245 aaKnown RBP10.24□□□□□ -0.77
LYS20YDL182W YJL171CP46992 396 aa10.23□□□□□ -0.77
LYS20YDL182W MAK21Q12176 1025 aaKnown RBP10.23□□□□□ -0.77
LYS20YDL182W SRF1Q12516 437 aa10.23□□□□□ -0.77
LYS20YDL182W GSC2P40989 1895 aa10.22□□□□□ -0.77
LYS20YDL182W PCS60P38137 543 aaKnown RBP RIP-Chip data10.22□□□□□ -0.77not detected
LYS20YDL182W BSD2P38356 321 aa10.22□□□□□ -0.77
LYS20YDL182W NUG1P40010 520 aaKnown RBP10.22□□□□□ -0.77
LYS20YDL182W SUP35P05453 685 aaKnown RBP10.21□□□□□ -0.77
LYS20YDL182W RPT3P33298 428 aaKnown RBP10.21□□□□□ -0.77
LYS20YDL182W JJJ2P46997 583 aa10.21□□□□□ -0.77
LYS20YDL182W RRT6P53117 311 aaPredicted RBP10.21□□□□□ -0.77
LYS20YDL182W ACK1Q07622 623 aaPredicted RBP10.2□□□□□ -0.78
LYS20YDL182W HAA1Q12753 694 aaKnown RBP10.2□□□□□ -0.78
LYS20YDL182W RPS19AP07280 144 aaKnown RBP10.19□□□□□ -0.78
LYS20YDL182W RPS19BP07281 144 aaPredicted RBP10.19□□□□□ -0.78
LYS20YDL182W MRPL32P25348 183 aa10.19□□□□□ -0.78
LYS20YDL182W SLA1P32790 1244 aa10.19□□□□□ -0.78
LYS20YDL182W CST9Q06032 482 aa10.19□□□□□ -0.78
LYS20YDL182W MOT2P34909 587 aaKnown RBP10.18□□□□□ -0.78
LYS20YDL182W SPT21P35209 758 aa10.18□□□□□ -0.78
LYS20YDL182W GLO3P38682 493 aaKnown RBP10.18□□□□□ -0.78
LYS20YDL182W YFH7P43591 353 aa10.18□□□□□ -0.78
LYS20YDL182W RAD2P07276 1031 aa10.17□□□□□ -0.78
LYS20YDL182W SEC18P18759 758 aaKnown RBP10.17□□□□□ -0.78
LYS20YDL182W NIT1P40447 199 aa10.17□□□□□ -0.78
LYS20YDL182W PSF3Q12146 194 aa10.17□□□□□ -0.78
LYS20YDL182W SDH2P21801 266 aa10.16□□□□□ -0.78
LYS20YDL182W NAB6Q03735 1134 aaKnown RBP RIP-Chip data10.16□□□□□ -0.78not detected
LYS20YDL182W AI2P03876 854 aa10.15□□□□□ -0.78
LYS20YDL182W APE3P37302 537 aaKnown RBP10.15□□□□□ -0.78
LYS20YDL182W YCK3P39962 524 aa10.15□□□□□ -0.78
LYS20YDL182W YIL092WP40497 633 aa10.15□□□□□ -0.78
LYS20YDL182W NCS6P53088 359 aa10.15□□□□□ -0.78
LYS20YDL182W PUS6P53294 404 aa10.15□□□□□ -0.78
LYS20YDL182W GYP5Q12344 894 aa10.15□□□□□ -0.78
LYS20YDL182W SNF3P10870 884 aa10.14□□□□□ -0.79
LYS20YDL182W HAL5P38970 855 aaKnown RBP10.14□□□□□ -0.79
LYS20YDL182W YIR042CP40586 236 aa10.14□□□□□ -0.79
LYS20YDL182W DAL5P15365 543 aa10.13□□□□□ -0.79
LYS20YDL182W KEL1P38853 1164 aaKnown RBP10.13□□□□□ -0.79
LYS20YDL182W GAL2P13181 574 aa10.12□□□□□ -0.79
LYS20YDL182W YNL193WP53870 558 aa10.12□□□□□ -0.79
LYS20YDL182W RBA50Q04418 439 aa10.12□□□□□ -0.79
LYS20YDL182W INM2Q05533 292 aa10.12□□□□□ -0.79
LYS20YDL182W PFK2P16862 959 aaKnown RBP RIP-Chip data10.11□□□□□ -0.79not detected
LYS20YDL182W PTK1P36002 662 aaPredicted RBP10.11□□□□□ -0.79
LYS20YDL182W FPR3P38911 411 aaKnown RBP10.11□□□□□ -0.79
LYS20YDL182W FUN12P39730 1002 aaKnown RBP10.11□□□□□ -0.79
LYS20YDL182W NSG2P53898 299 aa10.11□□□□□ -0.79
LYS20YDL182W RPN7Q06103 429 aaKnown RBP10.11□□□□□ -0.79
LYS20YDL182W PPM2Q08282 695 aa10.11□□□□□ -0.79
LYS20YDL182W RAD53P22216 821 aa10.1□□□□□ -0.79
LYS20YDL182W RSC30P38781 883 aa10.1□□□□□ -0.79
LYS20YDL182W PEX29Q03370 554 aa10.1□□□□□ -0.79
LYS20YDL182W PIB1Q06651 286 aa10.1□□□□□ -0.79
LYS20YDL182W FLO1P32768 1537 aa10.09□□□□□ -0.79
LYS20YDL182W GCD7P32502 381 aaPredicted RBP10.09□□□□□ -0.79
LYS20YDL182W ILV3P39522 585 aaKnown RBP10.09□□□□□ -0.79
LYS20YDL182W APL6P46682 809 aa10.09□□□□□ -0.79
LYS20YDL182W ASH1P34233 588 aa10.08□□□□□ -0.8
LYS20YDL182W YNG2P38806 282 aaKnown RBP10.08□□□□□ -0.8
LYS20YDL182W GIN4Q12263 1142 aa10.08□□□□□ -0.8
LYS20YDL182W RRI2Q12348 645 aa10.08□□□□□ -0.8
LYS20YDL182W SSF1P38789 453 aaPredicted RBP10.07□□□□□ -0.8
LYS20YDL182W JIP4Q03361 876 aa10.07□□□□□ -0.8
LYS20YDL182W ADP1P25371 1049 aa10.06□□□□□ -0.8
LYS20YDL182W MDL2P33311 773 aa10.06□□□□□ -0.8
LYS20YDL182W KTR3P38130 404 aaPredicted RBP10.06□□□□□ -0.8
LYS20YDL182W SPO1P53541 631 aa10.06□□□□□ -0.8
LYS20YDL182W PMA1P05030 918 aaKnown RBP10.05□□□□□ -0.8
LYS20YDL182W PIF1P07271 859 aa10.05□□□□□ -0.8
LYS20YDL182W PAM1P37304 830 aaKnown RBP10.05□□□□□ -0.8
LYS20YDL182W TPS3P38426 1054 aaKnown RBP10.05□□□□□ -0.8
LYS20YDL182W MAC1P35192 417 aa10.04□□□□□ -0.8
LYS20YDL182W GRX7P38068 203 aa10.04□□□□□ -0.8
LYS20YDL182W HGH1P48362 394 aaKnown RBP10.04□□□□□ -0.8
LYS20YDL182W TUB2P02557 457 aaKnown RBP10.02□□□□□ -0.81
LYS20YDL182W YLR225CQ05948 407 aaKnown RBP10.02□□□□□ -0.81
LYS20YDL182W SGD1Q06132 899 aa10.02□□□□□ -0.81
LYS20YDL182W PCL8Q08966 492 aa10.02□□□□□ -0.81
LYS20YDL182W BOI1P38041 980 aaKnown RBP10.01□□□□□ -0.81
LYS20YDL182W YBL028CP38202 106 aa10.01□□□□□ -0.81
LYS20YDL182W SPR3P41901 512 aa10.01□□□□□ -0.81
LYS20YDL182W CYB2P00175 591 aa10□□□□□ -0.81
LYS20YDL182W YDJ1P25491 409 aaKnown RBP10□□□□□ -0.81
Retrieved 100 of 5,963 RNA–protein pairs in 31.3 ms