RNA–Protein interactions for RNA: YDL165W

CDC36, Transcript of Component of the CCR4-NOT core complex, yeastyeast

Gene CDC36, Length 576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC36YDL165W CYT1P07143 309 aa4.43□□□□□ -1.7
CDC36YDL165W COQ2P32378 372 aa4.43□□□□□ -1.7
CDC36YDL165W NAB2P32505 525 aaKnown RBP RIP-Chip data4.43□□□□□ -1.7not detected
CDC36YDL165W RPN1P38764 993 aaKnown RBP4.43□□□□□ -1.7
CDC36YDL165W CUS1Q02554 436 aaPredicted RBP4.43□□□□□ -1.7
CDC36YDL165W UTP4Q06679 776 aaKnown RBP4.43□□□□□ -1.7
CDC36YDL165W LEU3P08638 886 aa4.42□□□□□ -1.7
CDC36YDL165W KAE1P36132 386 aa4.42□□□□□ -1.7
CDC36YDL165W YLR122CQ12312 125 aa4.42□□□□□ -1.7
CDC36YDL165W MRP10O75012 95 aa4.41□□□□□ -1.7
CDC36YDL165W KAP122P32767 1081 aa4.41□□□□□ -1.7
CDC36YDL165W APM2P38700 605 aa4.41□□□□□ -1.7
CDC36YDL165W MRX10Q05648 414 aa4.41□□□□□ -1.7
CDC36YDL165W LIP5P32875 414 aa4.4□□□□□ -1.71
CDC36YDL165W CTH1P47976 325 aa4.4□□□□□ -1.71
CDC36YDL165W AOS1Q06624 347 aa4.4□□□□□ -1.71
CDC36YDL165W ENO1P00924 437 aaKnown RBP4.39□□□□□ -1.71
CDC36YDL165W TOS1P38288 455 aa4.39□□□□□ -1.71
CDC36YDL165W RPC31P17890 251 aa4.38□□□□□ -1.71
CDC36YDL165W RSC6P25632 483 aa4.38□□□□□ -1.71
CDC36YDL165W PUB1P32588 453 aaKnown RBP RIP-Chip data4.38□□□□□ -1.71not detected
CDC36YDL165W SCD5P34758 872 aa4.38□□□□□ -1.71
CDC36YDL165W YJL007CP47080 104 aa4.38□□□□□ -1.71
CDC36YDL165W SLP1Q12232 587 aa4.38□□□□□ -1.71
CDC36YDL165W IDI1P15496 288 aa4.37□□□□□ -1.71
CDC36YDL165W ELM1P32801 640 aa4.37□□□□□ -1.71
CDC36YDL165W NGR1P32831 672 aaKnown RBP4.37□□□□□ -1.71
CDC36YDL165W HXT5P38695 592 aa4.37□□□□□ -1.71
CDC36YDL165W BRE4Q07660 1125 aa4.37□□□□□ -1.71
CDC36YDL165W UBP1P25037 809 aa4.36□□□□□ -1.71
CDC36YDL165W PEP12P32854 288 aa4.36□□□□□ -1.71
CDC36YDL165W SAF1P38352 637 aa4.36□□□□□ -1.71
CDC36YDL165W TY4B-PA0A0B7P3V8 1104 aa4.35□□□□□ -1.71
CDC36YDL165W ACS2P52910 683 aaKnown RBP4.35□□□□□ -1.71
CDC36YDL165W YGR130CP53278 816 aa4.35□□□□□ -1.71
CDC36YDL165W TY1A-NL1Q12391 440 aaKnown RBP4.35□□□□□ -1.71
CDC36YDL165W TY4A-HQ6Q5P6 413 aa4.35□□□□□ -1.71
CDC36YDL165W CHS2P14180 963 aa4.34□□□□□ -1.71
CDC36YDL165W QDR2P40474 542 aa4.34□□□□□ -1.71
CDC36YDL165W TED1P40533 473 aa4.34□□□□□ -1.71
CDC36YDL165W PHO87P25360 923 aa4.33□□□□□ -1.72
CDC36YDL165W GIP2P40036 548 aa4.33□□□□□ -1.72
CDC36YDL165W YER156CP40093 338 aaKnown RBP4.33□□□□□ -1.72
CDC36YDL165W ITC1P53125 1264 aa4.33□□□□□ -1.72
CDC36YDL165W NAM7P30771 971 aaKnown RBP4.32□□□□□ -1.72
CDC36YDL165W AKR1P39010 764 aa4.32□□□□□ -1.72
CDC36YDL165W MAG2Q06436 670 aaKnown RBP4.32□□□□□ -1.72
CDC36YDL165W PUF3Q07807 879 aaKnown RBP RIP-Chip data4.32□□□□□ -1.72not detected
CDC36YDL165W TIF1P10081 395 aaKnown RBP4.31□□□□□ -1.72
CDC36YDL165W RTG2P32608 588 aaKnown RBP4.31□□□□□ -1.72
CDC36YDL165W ATG32P40458 529 aa4.31□□□□□ -1.72
CDC36YDL165W GAS4Q08271 471 aa4.31□□□□□ -1.72
CDC36YDL165W HAP4P14064 554 aa4.3□□□□□ -1.72
CDC36YDL165W BIM1P40013 344 aa4.3□□□□□ -1.72
CDC36YDL165W KTR7P40504 517 aa4.3□□□□□ -1.72
CDC36YDL165W SOK2P53438 785 aaPredicted RBP4.3□□□□□ -1.72
CDC36YDL165W CYC7P00045 113 aa4.29□□□□□ -1.72
CDC36YDL165W UBP5P39944 805 aa4.29□□□□□ -1.72
CDC36YDL165W SPO74P45819 413 aa4.29□□□□□ -1.72
CDC36YDL165W DSE4P53753 1117 aa4.29□□□□□ -1.72
CDC36YDL165W REC8Q12188 680 aa4.29□□□□□ -1.72
CDC36YDL165W YOR296WQ08748 1289 aa4.28□□□□□ -1.72
CDC36YDL165W RNQ1P25367 405 aa4.27□□□□□ -1.73
CDC36YDL165W ROM1P53046 1155 aa4.27□□□□□ -1.73
CDC36YDL165W VMA3P25515 160 aa4.25□□□□□ -1.73
CDC36YDL165W SEA4P38164 1038 aa4.25□□□□□ -1.73
CDC36YDL165W BSD2P38356 321 aa4.25□□□□□ -1.73
CDC36YDL165W RPL34BP40525 121 aaKnown RBP4.25□□□□□ -1.73
CDC36YDL165W CAB1Q04430 367 aa4.25□□□□□ -1.73
CDC36YDL165W RSC2Q06488 889 aa4.25□□□□□ -1.73
CDC36YDL165W MSB1P21339 1137 aaKnown RBP4.24□□□□□ -1.73
CDC36YDL165W GIP1P38229 639 aa4.24□□□□□ -1.73
CDC36YDL165W YJL181WP46987 611 aa4.24□□□□□ -1.73
CDC36YDL165W VAN1P23642 535 aa4.23□□□□□ -1.73
CDC36YDL165W PAN5P38787 379 aa4.23□□□□□ -1.73
CDC36YDL165W DYS1P38791 387 aa4.23□□□□□ -1.73
CDC36YDL165W PPT1P53043 513 aa4.23□□□□□ -1.73
CDC36YDL165W GAL2P13181 574 aa4.22□□□□□ -1.73
CDC36YDL165W MRPL33P20084 86 aa4.22□□□□□ -1.73
CDC36YDL165W SUV3P32580 737 aa4.22□□□□□ -1.73
CDC36YDL165W SEG2P34250 1132 aa4.22□□□□□ -1.73
CDC36YDL165W LRG1P35688 1017 aa4.22□□□□□ -1.73
CDC36YDL165W CWH41P53008 833 aa4.22□□□□□ -1.73
CDC36YDL165W SDH1Q00711 640 aa4.21□□□□□ -1.74
CDC36YDL165W YIL165CP40446 119 aa4.2□□□□□ -1.74
CDC36YDL165W INP51P40559 946 aaKnown RBP4.2□□□□□ -1.74
CDC36YDL165W NCE103P53615 221 aa4.2□□□□□ -1.74
CDC36YDL165W FOX2Q02207 900 aaKnown RBP4.2□□□□□ -1.74
CDC36YDL165W TRS33Q99394 268 aa4.2□□□□□ -1.74
CDC36YDL165W YCR015CP25616 317 aa4.19□□□□□ -1.74
CDC36YDL165W LDH1P38139 375 aa4.19□□□□□ -1.74
CDC36YDL165W ISW1P38144 1129 aa4.19□□□□□ -1.74
CDC36YDL165W POL5P39985 1022 aaKnown RBP4.19□□□□□ -1.74
CDC36YDL165W MAE1P36013 669 aaKnown RBP4.18□□□□□ -1.74
CDC36YDL165W SIS2P36024 562 aa4.18□□□□□ -1.74
CDC36YDL165W YBR197CP38306 217 aa4.18□□□□□ -1.74
CDC36YDL165W NIT1P40447 199 aa4.18□□□□□ -1.74
CDC36YDL165W GUP1P53154 560 aa4.18□□□□□ -1.74
CDC36YDL165W GCD1P09032 578 aaPredicted RBP4.17□□□□□ -1.74
CDC36YDL165W TFA2P36145 328 aa4.17□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms