RNA–Protein interactions for RNA: YCR017C

CWH43, Transcript of Putative sensor/transporter protein involved in cell wall biogenesis, yeast

Gene CWH43, Length 2,862 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CWH43	YCR017C	RRG1	Q12167	365 aa	Predicted RBP	4.89	□□□□□ -1.63
CWH43	YCR017C	GCD7	P32502	381 aa	Predicted RBP	4.89	□□□□□ -1.63
CWH43	YCR017C	RPN1	P38764	993 aa	Known RBP	4.89	□□□□□ -1.63
CWH43	YCR017C	ICP55	P40051	511 aa		4.89	□□□□□ -1.63
CWH43	YCR017C	ITC1	P53125	1264 aa		4.89	□□□□□ -1.63
CWH43	YCR017C	ACK1	Q07622	623 aa	Predicted RBP	4.89	□□□□□ -1.63
CWH43	YCR017C	SAM3	Q08986	587 aa		4.89	□□□□□ -1.63
CWH43	YCR017C	SUI2	P20459	304 aa	Known RBP	4.88	□□□□□ -1.63
CWH43	YCR017C	BOI2	P39969	1040 aa		4.88	□□□□□ -1.63
CWH43	YCR017C	SQS1	P53866	767 aa	Known RBP	4.88	□□□□□ -1.63
CWH43	YCR017C	CTI6	Q08923	506 aa		4.88	□□□□□ -1.63
CWH43	YCR017C	PSH1	Q12161	406 aa		4.88	□□□□□ -1.63
CWH43	YCR017C	SRF1	Q12516	437 aa		4.88	□□□□□ -1.63
CWH43	YCR017C	SSA4	P22202	642 aa	Known RBP	4.87	□□□□□ -1.63
CWH43	YCR017C	KRE2	P27809	442 aa		4.87	□□□□□ -1.63
CWH43	YCR017C	UBP12	P39538	1254 aa		4.87	□□□□□ -1.63
CWH43	YCR017C	SET4	P42948	560 aa		4.87	□□□□□ -1.63
CWH43	YCR017C	PKH1	Q03407	766 aa		4.87	□□□□□ -1.63
CWH43	YCR017C	APL2	P36000	726 aa	Predicted RBP	4.87	□□□□□ -1.63
CWH43	YCR017C	ULI1	P43604	169 aa		4.87	□□□□□ -1.63
CWH43	YCR017C	RRT6	P53117	311 aa	Predicted RBP	4.87	□□□□□ -1.63
CWH43	YCR017C	VPS64	Q03944	604 aa		4.87	□□□□□ -1.63
CWH43	YCR017C	SLI15	P38283	698 aa		4.86	□□□□□ -1.63
CWH43	YCR017C	BSD2	P38356	321 aa		4.86	□□□□□ -1.63
CWH43	YCR017C	GAL2	P13181	574 aa		4.86	□□□□□ -1.63
CWH43	YCR017C	NUP133	P36161	1157 aa		4.86	□□□□□ -1.63
CWH43	YCR017C	EMP47	P43555	445 aa		4.86	□□□□□ -1.63
CWH43	YCR017C	CYB2	P00175	591 aa		4.86	□□□□□ -1.63
CWH43	YCR017C	TRP5	P00931	707 aa	Known RBP	4.86	□□□□□ -1.63
CWH43	YCR017C	FRD1	P32614	470 aa	Known RBP	4.86	□□□□□ -1.63
CWH43	YCR017C	ECM16	Q04217	1267 aa	Known RBP	4.86	□□□□□ -1.63
CWH43	YCR017C	GYP5	Q12344	894 aa		4.86	□□□□□ -1.63
CWH43	YCR017C	SNU66	Q12420	587 aa	Predicted RBP	4.86	□□□□□ -1.63
CWH43	YCR017C	MSH4	P40965	878 aa	Predicted RBP	4.85	□□□□□ -1.63
CWH43	YCR017C	OSH3	P38713	996 aa	Known RBP	4.85	□□□□□ -1.63
CWH43	YCR017C	RAD2	P07276	1031 aa		4.84	□□□□□ -1.63
CWH43	YCR017C	ICL1	P28240	557 aa	Predicted RBP	4.84	□□□□□ -1.63
CWH43	YCR017C	PEA2	P40091	420 aa		4.84	□□□□□ -1.63
CWH43	YCR017C	YGR117C	P53270	476 aa		4.84	□□□□□ -1.63
CWH43	YCR017C	SRC1	Q03707	834 aa		4.84	□□□□□ -1.63
CWH43	YCR017C	COQ8	P27697	501 aa		4.84	□□□□□ -1.63
CWH43	YCR017C	CWC15	Q03772	175 aa	Known RBP	4.84	□□□□□ -1.63
CWH43	YCR017C	ARG82	P07250	355 aa		4.83	□□□□□ -1.64
CWH43	YCR017C	MGM1	P32266	881 aa		4.83	□□□□□ -1.64
CWH43	YCR017C	YJL171C	P46992	396 aa		4.83	□□□□□ -1.64
CWH43	YCR017C	PRP42	Q03776	544 aa	Known RBP	4.83	□□□□□ -1.64
CWH43	YCR017C	PDR18	P53756	1333 aa		4.83	□□□□□ -1.64
CWH43	YCR017C	ETP1	P38748	585 aa	Known RBP	4.83	□□□□□ -1.64
CWH43	YCR017C	RSC30	P38781	883 aa		4.83	□□□□□ -1.64
CWH43	YCR017C	YIL092W	P40497	633 aa		4.83	□□□□□ -1.64
CWH43	YCR017C	YIL089W	P40500	205 aa		4.83	□□□□□ -1.64
CWH43	YCR017C	WRS1	Q12109	432 aa	Known RBP	4.83	□□□□□ -1.64
CWH43	YCR017C	FLO1	P32768	1537 aa		4.83	□□□□□ -1.64
CWH43	YCR017C	RAD24	P32641	659 aa		4.83	□□□□□ -1.64
CWH43	YCR017C	FET4	P40988	552 aa		4.82	□□□□□ -1.64
CWH43	YCR017C	NCB2	Q92317	146 aa		4.82	□□□□□ -1.64
CWH43	YCR017C	NOP2	P40991	618 aa	Known RBP	4.82	□□□□□ -1.64
CWH43	YCR017C	ZDS2	P54786	942 aa		4.82	□□□□□ -1.64
CWH43	YCR017C	RVB2	Q12464	471 aa	Known RBP	4.82	□□□□□ -1.64
CWH43	YCR017C	HTA1	P04911	132 aa	Known RBP	4.81	□□□□□ -1.64
CWH43	YCR017C	HTA2	P04912	132 aa		4.81	□□□□□ -1.64
CWH43	YCR017C	HVG1	P0CE11	249 aa		4.81	□□□□□ -1.64
CWH43	YCR017C	ATH1	P48016	1211 aa		4.81	□□□□□ -1.64
CWH43	YCR017C	CSI1	Q04368	295 aa		4.81	□□□□□ -1.64
CWH43	YCR017C	THI3	Q07471	609 aa		4.81	□□□□□ -1.64
CWH43	YCR017C	LDB19	Q12502	818 aa		4.81	□□□□□ -1.64
CWH43	YCR017C	THS1	P04801	734 aa	Known RBP	4.81	□□□□□ -1.64
CWH43	YCR017C	YFH7	P43591	353 aa		4.81	□□□□□ -1.64
CWH43	YCR017C	APL6	P46682	809 aa		4.81	□□□□□ -1.64
CWH43	YCR017C	TIF6	Q12522	245 aa	Known RBP	4.81	□□□□□ -1.64
CWH43	YCR017C	TOP1	P04786	769 aa		4.8	□□□□□ -1.64
CWH43	YCR017C	PTC3	P34221	468 aa	Known RBP	4.8	□□□□□ -1.64
CWH43	YCR017C	SPL2	P38839	148 aa		4.8	□□□□□ -1.64
CWH43	YCR017C	VHR2	P40041	505 aa		4.8	□□□□□ -1.64
CWH43	YCR017C	UTP7	P40055	554 aa	Known RBP	4.8	□□□□□ -1.64
CWH43	YCR017C	SNU71	P53207	620 aa	Known RBP	4.8	□□□□□ -1.64
CWH43	YCR017C	RPT4	P53549	437 aa	Known RBP	4.8	□□□□□ -1.64
CWH43	YCR017C	PCL8	Q08966	492 aa		4.8	□□□□□ -1.64
CWH43	YCR017C	IOC2	Q12072	812 aa		4.8	□□□□□ -1.64
CWH43	YCR017C	LCB1	P25045	558 aa	Known RBP	4.8	□□□□□ -1.64
CWH43	YCR017C	DCW1	P36091	449 aa		4.8	□□□□□ -1.64
CWH43	YCR017C	EDS1	P38073	919 aa		4.8	□□□□□ -1.64
CWH43	YCR017C	RRD1	P40454	393 aa	Known RBP	4.8	□□□□□ -1.64
CWH43	YCR017C	JJJ2	P46997	583 aa		4.8	□□□□□ -1.64
CWH43	YCR017C	CSR2	Q12734	1121 aa		4.8	□□□□□ -1.64
CWH43	YCR017C	MPH3	P0CE00	602 aa		4.79	□□□□□ -1.64
CWH43	YCR017C	IOC3	P43596	787 aa		4.79	□□□□□ -1.64
CWH43	YCR017C	MLC1	P53141	149 aa		4.79	□□□□□ -1.64
CWH43	YCR017C	PRS1	P32895	427 aa	Known RBP	4.79	□□□□□ -1.64
CWH43	YCR017C	DIT2	P21595	489 aa		4.79	□□□□□ -1.64
CWH43	YCR017C	NGR1	P32831	672 aa	Known RBP	4.79	□□□□□ -1.64
CWH43	YCR017C	YBR287W	P38355	427 aa		4.79	□□□□□ -1.64
CWH43	YCR017C	IRC4	Q03036	179 aa		4.79	□□□□□ -1.64
CWH43	YCR017C	SEC20	P28791	383 aa		4.78	□□□□□ -1.64
CWH43	YCR017C	GUT1	P32190	709 aa		4.78	□□□□□ -1.64
CWH43	YCR017C	GLO3	P38682	493 aa	Known RBP	4.78	□□□□□ -1.64
CWH43	YCR017C	YNG2	P38806	282 aa	Known RBP	4.78	□□□□□ -1.64
CWH43	YCR017C	ENP2	P48234	707 aa	Known RBP	4.78	□□□□□ -1.64
CWH43	YCR017C	DUS1	P53759	423 aa	Known RBP	4.78	□□□□□ -1.64
CWH43	YCR017C	YNL035C	P53962	389 aa	Known RBP	4.78	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 93 ms