RNA–Protein interactions for RNA: YBL031W

SHE1, Transcript of Mitotic spindle protein, yeast

Gene SHE1, Length 1,017 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHE1	YBL031W	UBP1	P25037	809 aa		6.49	□□□□□ -1.37
SHE1	YBL031W	LSB6	P42951	607 aa		6.48	□□□□□ -1.37
SHE1	YBL031W	SEN54	Q02825	467 aa	Predicted RBP	6.48	□□□□□ -1.37
SHE1	YBL031W	KAR5	Q04746	504 aa		6.48	□□□□□ -1.37
SHE1	YBL031W	YBL113C	Q7M4S9	792 aa		6.48	□□□□□ -1.37
SHE1	YBL031W	AMN1	P38285	549 aa	Predicted RBP	6.47	□□□□□ -1.37
SHE1	YBL031W	TPS3	P38426	1054 aa	Known RBP	6.47	□□□□□ -1.37
SHE1	YBL031W	PNP1	Q05788	311 aa		6.47	□□□□□ -1.37
SHE1	YBL031W	PDC5	P16467	563 aa	Known RBP	6.46	□□□□□ -1.38
SHE1	YBL031W	SEC20	P28791	383 aa		6.46	□□□□□ -1.38
SHE1	YBL031W	KNS1	P32350	737 aa	Predicted RBP	6.46	□□□□□ -1.38
SHE1	YBL031W	SPR3	P41901	512 aa		6.45	□□□□□ -1.38
SHE1	YBL031W	ATG1	P53104	897 aa		6.45	□□□□□ -1.38
SHE1	YBL031W	PUN1	Q06991	263 aa		6.45	□□□□□ -1.38
SHE1	YBL031W	CYT1	P07143	309 aa		6.44	□□□□□ -1.38
SHE1	YBL031W	RPS6A	P0CX37	236 aa	Known RBP	6.44	□□□□□ -1.38
SHE1	YBL031W	RPS6B	P0CX38	236 aa	Predicted RBP	6.44	□□□□□ -1.38
SHE1	YBL031W	HEM3	P28789	327 aa		6.44	□□□□□ -1.38
SHE1	YBL031W	NTH2	P35172	780 aa		6.44	□□□□□ -1.38
SHE1	YBL031W	ERP5	P38819	212 aa		6.44	□□□□□ -1.38
SHE1	YBL031W	PRY1	P47032	299 aa		6.44	□□□□□ -1.38
SHE1	YBL031W	CWH41	P53008	833 aa		6.44	□□□□□ -1.38
SHE1	YBL031W	FUR4	P05316	633 aa	Known RBP	6.43	□□□□□ -1.38
SHE1	YBL031W	RPS31	P05759	152 aa	Known RBP	6.43	□□□□□ -1.38
SHE1	YBL031W	SWI5	P08153	709 aa		6.43	□□□□□ -1.38
SHE1	YBL031W	ASF1	P32447	279 aa		6.43	□□□□□ -1.38
SHE1	YBL031W	MAC1	P35192	417 aa		6.43	□□□□□ -1.38
SHE1	YBL031W	TY1A-DR2	Q03964	440 aa	Known RBP	6.43	□□□□□ -1.38
SHE1	YBL031W	ALD4	P46367	519 aa	Known RBP	6.42	□□□□□ -1.38
SHE1	YBL031W	RRN6	P32786	894 aa		6.41	□□□□□ -1.38
SHE1	YBL031W	NGR1	P32831	672 aa	Known RBP	6.41	□□□□□ -1.38
SHE1	YBL031W	BOL3	P39724	118 aa		6.41	□□□□□ -1.38
SHE1	YBL031W	SSN2	P38931	1420 aa		6.41	□□□□□ -1.38
SHE1	YBL031W	TRL1	P09880	827 aa	Known RBP	6.4	□□□□□ -1.38
SHE1	YBL031W	GRS1	P38088	690 aa	Known RBP	6.4	□□□□□ -1.38
SHE1	YBL031W	TCB3	Q03640	1545 aa	Known RBP	6.4	□□□□□ -1.39
SHE1	YBL031W	PPX1	P38698	397 aa		6.39	□□□□□ -1.39
SHE1	YBL031W	YTA6	P40328	754 aa		6.39	□□□□□ -1.39
SHE1	YBL031W	SNU71	P53207	620 aa	Known RBP	6.39	□□□□□ -1.39
SHE1	YBL031W	YPQ2	Q06328	317 aa		6.39	□□□□□ -1.39
SHE1	YBL031W	MSC6	Q08818	692 aa	Known RBP	6.39	□□□□□ -1.39
SHE1	YBL031W	MCM1	P11746	286 aa		6.38	□□□□□ -1.39
SHE1	YBL031W	SUV3	P32580	737 aa		6.38	□□□□□ -1.39
SHE1	YBL031W	ACF4	P47129	309 aa		6.38	□□□□□ -1.39
SHE1	YBL031W	LSO1	Q3E827	93 aa		6.38	□□□□□ -1.39
SHE1	YBL031W	LEU1	P07264	779 aa	Known RBP	6.37	□□□□□ -1.39
SHE1	YBL031W	GLO3	P38682	493 aa	Known RBP	6.37	□□□□□ -1.39
SHE1	YBL031W	YHL050C	P38721	697 aa		6.37	□□□□□ -1.39
SHE1	YBL031W	YHR219W	P38900	624 aa		6.37	□□□□□ -1.39
SHE1	YBL031W	IPL1	P38991	367 aa		6.37	□□□□□ -1.39
SHE1	YBL031W	MDJ2	P42834	146 aa		6.37	□□□□□ -1.39
SHE1	YBL031W	YNL165W	P53891	406 aa		6.37	□□□□□ -1.39
SHE1	YBL031W	RPP1A	P05318	106 aa	Predicted RBP	6.36	□□□□□ -1.39
SHE1	YBL031W	QDR1	P40475	563 aa		6.36	□□□□□ -1.39
SHE1	YBL031W	ALO1	P54783	526 aa	Known RBP	6.36	□□□□□ -1.39
SHE1	YBL031W	RGP1	P16664	663 aa		6.35	□□□□□ -1.39
SHE1	YBL031W	MSC7	P38694	644 aa		6.35	□□□□□ -1.39
SHE1	YBL031W	ALD2	P47771	506 aa		6.35	□□□□□ -1.39
SHE1	YBL031W	NOP7	P53261	605 aa	Known RBP	6.35	□□□□□ -1.39
SHE1	YBL031W	YPL034W	Q03083	165 aa		6.35	□□□□□ -1.39
SHE1	YBL031W	SCD5	P34758	872 aa		6.34	□□□□□ -1.39
SHE1	YBL031W	CAB1	Q04430	367 aa		6.34	□□□□□ -1.39
SHE1	YBL031W	MLF3	P32047	452 aa		6.33	□□□□□ -1.4
SHE1	YBL031W	Q0182	Q9ZZW1	134 aa		6.33	□□□□□ -1.4
SHE1	YBL031W	ISC10	P32645	267 aa		6.32	□□□□□ -1.4
SHE1	YBL031W	PGM2	P37012	569 aa	Known RBP	6.32	□□□□□ -1.4
SHE1	YBL031W	ALG14	P38242	237 aa		6.32	□□□□□ -1.4
SHE1	YBL031W	YBR197C	P38306	217 aa		6.32	□□□□□ -1.4
SHE1	YBL031W	FOX2	Q02207	900 aa	Known RBP	6.32	□□□□□ -1.4
SHE1	YBL031W	NUT2	Q06213	157 aa		6.32	□□□□□ -1.4
SHE1	YBL031W	NHA1	Q99271	985 aa		6.32	□□□□□ -1.4
SHE1	YBL031W	UTP4	Q06679	776 aa	Known RBP	6.31	□□□□□ -1.4
SHE1	YBL031W	APC11	Q12157	165 aa		6.31	□□□□□ -1.4
SHE1	YBL031W	OMA1	P36163	345 aa		6.3	□□□□□ -1.4
SHE1	YBL031W	HXT5	P38695	592 aa		6.3	□□□□□ -1.4
SHE1	YBL031W	UFD2	P54860	961 aa		6.3	□□□□□ -1.4
SHE1	YBL031W	BOI1	P38041	980 aa	Known RBP	6.29	□□□□□ -1.4
SHE1	YBL031W	MTO1	P53070	669 aa		6.29	□□□□□ -1.4
SHE1	YBL031W	TRS120	Q04183	1289 aa		6.29	□□□□□ -1.4
SHE1	YBL031W	WHI5	Q12416	295 aa		6.29	□□□□□ -1.4
SHE1	YBL031W	FRT1	Q99332	602 aa		6.29	□□□□□ -1.4
SHE1	YBL031W	MRPL33	P20084	86 aa		6.28	□□□□□ -1.4
SHE1	YBL031W	THI12	P42883	340 aa		6.28	□□□□□ -1.4
SHE1	YBL031W	THI5	P43534	340 aa		6.28	□□□□□ -1.4
SHE1	YBL031W	POL32	P47110	350 aa		6.28	□□□□□ -1.4
SHE1	YBL031W	THI11	P47183	340 aa		6.28	□□□□□ -1.4
SHE1	YBL031W	RRP15	Q06511	250 aa	Predicted RBP	6.28	□□□□□ -1.4
SHE1	YBL031W	THI13	Q07748	340 aa		6.28	□□□□□ -1.4
SHE1	YBL031W	BUD9	P53226	547 aa		6.27	□□□□□ -1.41
SHE1	YBL031W	HEH2	Q03281	663 aa		6.26	□□□□□ -1.41
SHE1	YBL031W	RPB10	P22139	70 aa		6.25	□□□□□ -1.41
SHE1	YBL031W	PAM1	P37304	830 aa	Known RBP	6.25	□□□□□ -1.41
SHE1	YBL031W	MGE1	P38523	228 aa		6.24	□□□□□ -1.41
SHE1	YBL031W	PRK1	P40494	810 aa		6.24	□□□□□ -1.41
SHE1	YBL031W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	6.23	□□□□□ -1.41	not detected
SHE1	YBL031W	SMC1	P32908	1225 aa		6.23	□□□□□ -1.41
SHE1	YBL031W	NCL1	P38205	684 aa	Known RBP	6.23	□□□□□ -1.41
SHE1	YBL031W	SVF1	Q05515	481 aa		6.23	□□□□□ -1.41
SHE1	YBL031W	ATE1	P16639	503 aa		6.22	□□□□□ -1.41
SHE1	YBL031W	MET4	P32389	672 aa		6.22	□□□□□ -1.41

Retrieved 100 of 5,963 RNA–protein pairs in 21.1 ms