RNA–Protein interactions for RNA: YAL020C

ATS1, Protein required for modification of wobble nucleosides in tRNA, yeast

Gene ATS1, Length 1,002 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATS1	YAL020C	JJJ2	P46997	583 aa		18.57	■□□□□ 0.56
ATS1	YAL020C	CST9	Q06032	482 aa		18.57	■□□□□ 0.56
ATS1	YAL020C	ACK1	Q07622	623 aa	Predicted RBP	18.56	■□□□□ 0.56
ATS1	YAL020C	WRS1	Q12109	432 aa	Known RBP	18.56	■□□□□ 0.56
ATS1	YAL020C	PSF3	Q12146	194 aa		18.54	■□□□□ 0.56
ATS1	YAL020C	YPP1	P46951	817 aa		18.53	■□□□□ 0.56
ATS1	YAL020C	NCS6	P53088	359 aa		18.53	■□□□□ 0.56
ATS1	YAL020C	BOI2	P39969	1040 aa		18.52	■□□□□ 0.56
ATS1	YAL020C	RPP0	P05317	312 aa	Known RBP	18.51	■□□□□ 0.55
ATS1	YAL020C	NIT1	P40447	199 aa		18.51	■□□□□ 0.55
ATS1	YAL020C	ADR1	P07248	1323 aa		18.5	■□□□□ 0.55
ATS1	YAL020C	MOT2	P34909	587 aa	Known RBP	18.5	■□□□□ 0.55
ATS1	YAL020C	APE3	P37302	537 aa	Known RBP	18.5	■□□□□ 0.55
ATS1	YAL020C	YJL171C	P46992	396 aa		18.5	■□□□□ 0.55
ATS1	YAL020C	RSC30	P38781	883 aa		18.49	■□□□□ 0.55
ATS1	YAL020C	CSI1	Q04368	295 aa		18.48	■□□□□ 0.55
ATS1	YAL020C	RPT3	P33298	428 aa	Known RBP	18.47	■□□□□ 0.55
ATS1	YAL020C	GAL2	P13181	574 aa		18.46	■□□□□ 0.55
ATS1	YAL020C	VPS27	P40343	622 aa	Known RBP	18.46	■□□□□ 0.55
ATS1	YAL020C	YFH7	P43591	353 aa		18.46	■□□□□ 0.55
ATS1	YAL020C	MAK21	Q12176	1025 aa	Known RBP	18.46	■□□□□ 0.55
ATS1	YAL020C	RBA50	Q04418	439 aa		18.45	■□□□□ 0.54
ATS1	YAL020C	PUS6	P53294	404 aa		18.44	■□□□□ 0.54
ATS1	YAL020C	GSC2	P40989	1895 aa		18.43	■□□□□ 0.54
ATS1	YAL020C	DUR1,2	P32528	1835 aa	Known RBP	18.42	■□□□□ 0.54
ATS1	YAL020C	RPS19A	P07280	144 aa	Known RBP	18.41	■□□□□ 0.54
ATS1	YAL020C	RPS19B	P07281	144 aa	Predicted RBP	18.41	■□□□□ 0.54
ATS1	YAL020C	MAC1	P35192	417 aa		18.39	■□□□□ 0.53
ATS1	YAL020C	PIB1	Q06651	286 aa		18.39	■□□□□ 0.53
ATS1	YAL020C	SEC18	P18759	758 aa	Known RBP	18.38	■□□□□ 0.53
ATS1	YAL020C	SLA1	P32790	1244 aa		18.37	■□□□□ 0.53
ATS1	YAL020C	GLO3	P38682	493 aa	Known RBP	18.37	■□□□□ 0.53
ATS1	YAL020C	JIP4	Q03361	876 aa		18.37	■□□□□ 0.53
ATS1	YAL020C	AAD16	Q02895	342 aa		18.36	■□□□□ 0.53
ATS1	YAL020C	CDC45	Q08032	650 aa		18.36	■□□□□ 0.53
ATS1	YAL020C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	18.35	■□□□□ 0.53	not detected
ATS1	YAL020C	KEL1	P38853	1164 aa	Known RBP	18.35	■□□□□ 0.53
ATS1	YAL020C	YIR042C	P40586	236 aa		18.35	■□□□□ 0.53
ATS1	YAL020C	GIN4	Q12263	1142 aa		18.35	■□□□□ 0.53
ATS1	YAL020C	GYP5	Q12344	894 aa		18.35	■□□□□ 0.53
ATS1	YAL020C	ASH1	P34233	588 aa		18.34	■□□□□ 0.53
ATS1	YAL020C	APL6	P46682	809 aa		18.34	■□□□□ 0.53
ATS1	YAL020C	PEX29	Q03370	554 aa		18.34	■□□□□ 0.53
ATS1	YAL020C	INM2	Q05533	292 aa		18.33	■□□□□ 0.52
ATS1	YAL020C	RAD53	P22216	821 aa		18.32	■□□□□ 0.52
ATS1	YAL020C	PTK1	P36002	662 aa	Predicted RBP	18.32	■□□□□ 0.52
ATS1	YAL020C	PAM1	P37304	830 aa	Known RBP	18.32	■□□□□ 0.52
ATS1	YAL020C	TPS3	P38426	1054 aa	Known RBP	18.32	■□□□□ 0.52
ATS1	YAL020C	RRI2	Q12348	645 aa		18.32	■□□□□ 0.52
ATS1	YAL020C	PPM2	Q08282	695 aa		18.31	■□□□□ 0.52
ATS1	YAL020C	RVB2	Q12464	471 aa	Known RBP	18.31	■□□□□ 0.52
ATS1	YAL020C	AI2	P03876	854 aa		18.3	■□□□□ 0.52
ATS1	YAL020C	SNF3	P10870	884 aa		18.3	■□□□□ 0.52
ATS1	YAL020C	SGD1	Q06132	899 aa		18.3	■□□□□ 0.52
ATS1	YAL020C	HAL5	P38970	855 aa	Known RBP	18.29	■□□□□ 0.52
ATS1	YAL020C	MDL2	P33311	773 aa		18.28	■□□□□ 0.52
ATS1	YAL020C	YNL193W	P53870	558 aa		18.28	■□□□□ 0.52
ATS1	YAL020C	DAL5	P15365	543 aa		18.27	■□□□□ 0.52
ATS1	YAL020C	ADP1	P25371	1049 aa		18.27	■□□□□ 0.52
ATS1	YAL020C	SSF1	P38789	453 aa	Predicted RBP	18.27	■□□□□ 0.52
ATS1	YAL020C	SPR3	P41901	512 aa		18.27	■□□□□ 0.52
ATS1	YAL020C	PMA1	P05030	918 aa	Known RBP	18.26	■□□□□ 0.51
ATS1	YAL020C	YLR225C	Q05948	407 aa	Known RBP	18.26	■□□□□ 0.51
ATS1	YAL020C	PIF1	P07271	859 aa		18.24	■□□□□ 0.51
ATS1	YAL020C	YIL092W	P40497	633 aa		18.24	■□□□□ 0.51
ATS1	YAL020C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	18.24	■□□□□ 0.51	not detected
ATS1	YAL020C	RPN7	Q06103	429 aa	Known RBP	18.24	■□□□□ 0.51
ATS1	YAL020C	YNG2	P38806	282 aa	Known RBP	18.22	■□□□□ 0.51
ATS1	YAL020C	NSG2	P53898	299 aa		18.22	■□□□□ 0.51
ATS1	YAL020C	YRB30	P53107	440 aa	Predicted RBP	18.2	■□□□□ 0.5
ATS1	YAL020C	YBL028C	P38202	106 aa		18.18	■□□□□ 0.5
ATS1	YAL020C	NOP2	P40991	618 aa	Known RBP	18.18	■□□□□ 0.5
ATS1	YAL020C	HGH1	P48362	394 aa	Known RBP	18.18	■□□□□ 0.5
ATS1	YAL020C	SPO1	P53541	631 aa		18.18	■□□□□ 0.5
ATS1	YAL020C	GCD7	P32502	381 aa	Predicted RBP	18.17	■□□□□ 0.5
ATS1	YAL020C	PCL8	Q08966	492 aa		18.17	■□□□□ 0.5
ATS1	YAL020C	BOI1	P38041	980 aa	Known RBP	18.16	■□□□□ 0.5
ATS1	YAL020C	ACA1	P39970	489 aa		18.16	■□□□□ 0.5
ATS1	YAL020C	NET1	P47035	1189 aa		18.16	■□□□□ 0.5
ATS1	YAL020C	IXR1	P33417	597 aa		18.15	■□□□□ 0.5
ATS1	YAL020C	SPT21	P35209	758 aa		18.15	■□□□□ 0.5
ATS1	YAL020C	OCT1	P35999	772 aa		18.15	■□□□□ 0.5
ATS1	YAL020C	ERG7	P38604	731 aa		18.15	■□□□□ 0.5
ATS1	YAL020C	PIP2	P52960	996 aa		18.14	■□□□□ 0.49
ATS1	YAL020C	CYB2	P00175	591 aa		18.13	■□□□□ 0.49
ATS1	YAL020C	FLO1	P32768	1537 aa		18.13	■□□□□ 0.49
ATS1	YAL020C	TUB2	P02557	457 aa	Known RBP	18.12	■□□□□ 0.49
ATS1	YAL020C	GRX7	P38068	203 aa		18.12	■□□□□ 0.49
ATS1	YAL020C	NCB2	Q92317	146 aa		18.12	■□□□□ 0.49
ATS1	YAL020C	RAD2	P07276	1031 aa		18.11	■□□□□ 0.49
ATS1	YAL020C	MSH4	P40965	878 aa	Predicted RBP	18.11	■□□□□ 0.49
ATS1	YAL020C	KIN1	P13185	1064 aa		18.1	■□□□□ 0.49
ATS1	YAL020C	YDJ1	P25491	409 aa	Known RBP	18.1	■□□□□ 0.49
ATS1	YAL020C	ILV3	P39522	585 aa	Known RBP	18.09	■□□□□ 0.49
ATS1	YAL020C	PAH1	P32567	862 aa		18.08	■□□□□ 0.48
ATS1	YAL020C	MCD4	P36051	919 aa		18.08	■□□□□ 0.48
ATS1	YAL020C	PSF2	P40359	213 aa		18.08	■□□□□ 0.48
ATS1	YAL020C	ULP1	Q02724	621 aa		18.08	■□□□□ 0.48
ATS1	YAL020C	CFT2	Q12102	859 aa	Predicted RBP	18.08	■□□□□ 0.48
ATS1	YAL020C	LYS14	P40971	790 aa		18.07	■□□□□ 0.48

Retrieved 100 of 5,963 RNA–protein pairs in 165.5 ms