RNA–Protein interactions for RNA: ENST00000613707.1

GAPDHP41-201, Transcript of glyceraldehyde 3 phosphate dehydrogenase pseudogene 41, humanhuman

BASIC

Gene GAPDHP41, Length 975 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP41-201ENST00000613707 TJAP1Q5JTD0 557 aa12.28□□□□□ -0.44
GAPDHP41-201ENST00000613707 IL21Q9HBE4 155 aa12.28□□□□□ -0.44
GAPDHP41-201ENST00000613707 AQRO60306 1485 aaKnown RBP eCLIP12.27□□□□□ -0.44
GAPDHP41-201ENST00000613707 BLOC1S3Q6QNY0 202 aa12.27□□□□□ -0.45
GAPDHP41-201ENST00000613707 POLA1P09884 1462 aaPredicted RBP12.27□□□□□ -0.45
GAPDHP41-201ENST00000613707 CHD1O14646 1710 aa12.26□□□□□ -0.45
GAPDHP41-201ENST00000613707 FUT2Q10981 343 aa12.26□□□□□ -0.45
GAPDHP41-201ENST00000613707 PUS10Q3MIT2 529 aaKnown RBP12.25□□□□□ -0.45
GAPDHP41-201ENST00000613707 RAD54L2Q9Y4B4 1467 aa12.23□□□□□ -0.45
GAPDHP41-201ENST00000613707 KDM4AO75164 1064 aa12.23□□□□□ -0.45
GAPDHP41-201ENST00000613707 ZNF516Q92618 1163 aa12.23□□□□□ -0.45
GAPDHP41-201ENST00000613707 NR1I2O75469 434 aa12.22□□□□□ -0.45
GAPDHP41-201ENST00000613707 ATP6V1AP38606 617 aa12.22□□□□□ -0.45
GAPDHP41-201ENST00000613707 GRIPAP1Q4V328 841 aa12.22□□□□□ -0.45
GAPDHP41-201ENST00000613707 IFFO2Q5TF58 517 aa12.22□□□□□ -0.45
GAPDHP41-201ENST00000613707 NUTM1Q86Y26 1132 aa12.22□□□□□ -0.45
GAPDHP41-201ENST00000613707 ZPR1O75312 459 aa12.21□□□□□ -0.45
GAPDHP41-201ENST00000613707 MS4A1P11836 297 aa12.21□□□□□ -0.45
GAPDHP41-201ENST00000613707 BEGAINQ9BUH8 593 aa12.21□□□□□ -0.45
GAPDHP41-201ENST00000613707 USP46P62068 366 aa12.2□□□□□ -0.46
GAPDHP41-201ENST00000613707 SOGA1O94964 1423 aa12.2□□□□□ -0.46
GAPDHP41-201ENST00000613707 MORN1Q5T089 497 aa12.19□□□□□ -0.46
GAPDHP41-201ENST00000613707 TDRD9Q8NDG6 1382 aaKnown RBP12.18□□□□□ -0.46
GAPDHP41-201ENST00000613707 PRKCSHP14314 528 aaPredicted RBP12.18□□□□□ -0.46
GAPDHP41-201ENST00000613707 GPBP1L1Q9HC44 474 aaPredicted RBP12.18□□□□□ -0.46
GAPDHP41-201ENST00000613707 FGD5Q6ZNL6 1462 aa12.18□□□□□ -0.46
GAPDHP41-201ENST00000613707 CUX1P39880 1505 aa12.17□□□□□ -0.46
GAPDHP41-201ENST00000613707 TLL1O43897 1013 aa12.17□□□□□ -0.46
GAPDHP41-201ENST00000613707 CYB5RLQ6IPT4 315 aa12.17□□□□□ -0.46
GAPDHP41-201ENST00000613707 SCUBE3Q8IX30 993 aa12.16□□□□□ -0.46
GAPDHP41-201ENST00000613707 NKX2-3Q8TAU0 364 aa12.16□□□□□ -0.46
GAPDHP41-201ENST00000613707 ARAP1Q96P48 1450 aa12.15□□□□□ -0.46
GAPDHP41-201ENST00000613707 HOXA2O43364 376 aa12.15□□□□□ -0.46
GAPDHP41-201ENST00000613707 SLC27A5Q9Y2P5 690 aa12.15□□□□□ -0.46
GAPDHP41-201ENST00000613707 WDR97A6NE52 1622 aa12.15□□□□□ -0.47
GAPDHP41-201ENST00000613707 A0A0G2JS52 829 aa12.14□□□□□ -0.47
GAPDHP41-201ENST00000613707 SPIRE2Q8WWL2 714 aa12.14□□□□□ -0.47
GAPDHP41-201ENST00000613707 KDM4CQ9H3R0 1056 aa12.14□□□□□ -0.47
GAPDHP41-201ENST00000613707 SNAPC4Q5SXM2 1469 aa12.14□□□□□ -0.47
GAPDHP41-201ENST00000613707 NEUROD2Q15784 382 aa12.13□□□□□ -0.47
GAPDHP41-201ENST00000613707 HLA-CQ95604 372 aa12.13□□□□□ -0.47
GAPDHP41-201ENST00000613707 CLASP1Q7Z460 1538 aa12.12□□□□□ -0.47
GAPDHP41-201ENST00000613707 ADH1BP00325 375 aa12.11□□□□□ -0.47
GAPDHP41-201ENST00000613707 DIXDC1Q155Q3 683 aa12.11□□□□□ -0.47
GAPDHP41-201ENST00000613707 TBC1D2Q9BYX2 928 aa12.11□□□□□ -0.47
GAPDHP41-201ENST00000613707 FMNL1O95466 1100 aaPredicted RBP12.1□□□□□ -0.47
GAPDHP41-201ENST00000613707 GUCA2AQ02747 115 aa12.1□□□□□ -0.47
GAPDHP41-201ENST00000613707 Q3C1V9 767 aa12.1□□□□□ -0.47
GAPDHP41-201ENST00000613707 MAGI1Q96QZ7 1491 aaPredicted RBP12.09□□□□□ -0.47
GAPDHP41-201ENST00000613707 SPSB2Q99619 263 aa12.09□□□□□ -0.47
GAPDHP41-201ENST00000613707 GRIN2BQ13224 1484 aa12.08□□□□□ -0.47
GAPDHP41-201ENST00000613707 MOXD2PA6NHM9 499 aa12.08□□□□□ -0.48
GAPDHP41-201ENST00000613707 FDX1P10109 184 aa12.08□□□□□ -0.48
GAPDHP41-201ENST00000613707 GGCXP38435 758 aa12.08□□□□□ -0.48
GAPDHP41-201ENST00000613707 PBRM1Q86U86 1689 aa12.07□□□□□ -0.48
GAPDHP41-201ENST00000613707 SYNJ1O43426 1573 aa12.07□□□□□ -0.48
GAPDHP41-201ENST00000613707 NDUFV2P19404 249 aa12.07□□□□□ -0.48
GAPDHP41-201ENST00000613707 RNF19BQ6ZMZ0 732 aa12.07□□□□□ -0.48
GAPDHP41-201ENST00000613707 THAP11Q96EK4 314 aa12.07□□□□□ -0.48
GAPDHP41-201ENST00000613707 SYNJ2O15056 1496 aa12.07□□□□□ -0.48
GAPDHP41-201ENST00000613707 PPP1R18Q6NYC8 613 aa12.06□□□□□ -0.48
GAPDHP41-201ENST00000613707 BRICD5Q6PL45 260 aa12.06□□□□□ -0.48
GAPDHP41-201ENST00000613707 CHMP7Q8WUX9 453 aaPredicted RBP12.06□□□□□ -0.48
GAPDHP41-201ENST00000613707 SALL2Q9Y467 1007 aaPredicted RBP12.06□□□□□ -0.48
GAPDHP41-201ENST00000613707 S1PR4O95977 384 aa12.05□□□□□ -0.48
GAPDHP41-201ENST00000613707 BRPF1P55201 1214 aaPredicted RBP12.05□□□□□ -0.48
GAPDHP41-201ENST00000613707 DDRGK1Q96HY6 314 aa12.05□□□□□ -0.48
GAPDHP41-201ENST00000613707 FAM117AQ9C073 453 aa12.05□□□□□ -0.48
GAPDHP41-201ENST00000613707 SLC6A16Q9GZN6 736 aa12.05□□□□□ -0.48
GAPDHP41-201ENST00000613707 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.05□□□□□ -0.48
GAPDHP41-201ENST00000613707 ABCA5Q8WWZ7 1642 aa12.04□□□□□ -0.48
GAPDHP41-201ENST00000613707 GAPVD1Q14C86 1478 aa12.04□□□□□ -0.48
GAPDHP41-201ENST00000613707 ABCA10Q8WWZ4 1543 aa12.04□□□□□ -0.48
GAPDHP41-201ENST00000613707 MYSM1Q5VVJ2 828 aa12.02□□□□□ -0.49
GAPDHP41-201ENST00000613707 RSBN1LQ6PCB5 846 aaPredicted RBP12.02□□□□□ -0.49
GAPDHP41-201ENST00000613707 RSPH6AQ9H0K4 717 aa12.02□□□□□ -0.49
GAPDHP41-201ENST00000613707 PCDHGC3Q9UN70 934 aa12.02□□□□□ -0.49
GAPDHP41-201ENST00000613707 C6orf229H3BNL8 230 aa12.01□□□□□ -0.49
GAPDHP41-201ENST00000613707 SUPT5HO00267 1087 aaKnown RBP12.01□□□□□ -0.49
GAPDHP41-201ENST00000613707 RIC3Q7Z5B4 369 aa12.01□□□□□ -0.49
GAPDHP41-201ENST00000613707 USB1Q9BQ65 265 aaKnown RBP12.01□□□□□ -0.49
GAPDHP41-201ENST00000613707 SYMPKQ92797 1274 aaKnown RBP12□□□□□ -0.49
GAPDHP41-201ENST00000613707 SPTLC1O15269 473 aa11.99□□□□□ -0.49
GAPDHP41-201ENST00000613707 GJA5P36382 358 aa11.99□□□□□ -0.49
GAPDHP41-201ENST00000613707 MSS51Q4VC12 460 aa11.99□□□□□ -0.49
GAPDHP41-201ENST00000613707 FAM160A2Q8N612 972 aaPredicted RBP11.99□□□□□ -0.49
GAPDHP41-201ENST00000613707 PRDM9Q9NQV7 894 aa11.99□□□□□ -0.49
GAPDHP41-201ENST00000613707 RNF223E7ERA6 249 aa11.98□□□□□ -0.49
GAPDHP41-201ENST00000613707 PLEKHG3A1L390 1219 aa11.97□□□□□ -0.49
GAPDHP41-201ENST00000613707 CSPP1Q1MSJ5 1256 aa11.97□□□□□ -0.49
GAPDHP41-201ENST00000613707 BIVM-ERCC5R4GMW8 1640 aa11.97□□□□□ -0.49
GAPDHP41-201ENST00000613707 PPEF1O14829 653 aaPredicted RBP11.96□□□□□ -0.49
GAPDHP41-201ENST00000613707 CLK2P49760 499 aaKnown RBP11.96□□□□□ -0.49
GAPDHP41-201ENST00000613707 RETREG3Q86VR2 466 aa11.96□□□□□ -0.49
GAPDHP41-201ENST00000613707 POLR3EQ9NVU0 708 aa11.96□□□□□ -0.49
GAPDHP41-201ENST00000613707 LIMD1Q9UGP4 676 aa11.96□□□□□ -0.49
GAPDHP41-201ENST00000613707 TOP2BQ02880 1626 aa11.96□□□□□ -0.5
GAPDHP41-201ENST00000613707 WRNQ14191 1432 aaPredicted RBP eCLIP11.95□□□□□ -0.5
GAPDHP41-201ENST00000613707 MTMR2Q13614 643 aa11.95□□□□□ -0.5
GAPDHP41-201ENST00000613707 IL27Q8NEV9 243 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms