RNA–Protein interactions for RNA: ENST00000612399.4

PSMC6-219, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PSMC6, Length 1,590 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-219ENST00000612399 GCC2Q8IWJ2 1684 aa8.84□□□□□ -0.99
PSMC6-219ENST00000612399 ITGAEP38570 1179 aa8.83□□□□□ -1
PSMC6-219ENST00000612399 PRSS12P56730 875 aa8.83□□□□□ -1
PSMC6-219ENST00000612399 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.83□□□□□ -1
PSMC6-219ENST00000612399 AKNAQ7Z591 1439 aa8.83□□□□□ -1
PSMC6-219ENST00000612399 CLASP1Q7Z460 1538 aa8.83□□□□□ -1
PSMC6-219ENST00000612399 SUPT6HQ7KZ85 1726 aaKnown RBP8.83□□□□□ -1
PSMC6-219ENST00000612399 SPDYE16A6NNV3 312 aaPredicted RBP8.82□□□□□ -1
PSMC6-219ENST00000612399 NBPF26B4DH59 902 aa8.82□□□□□ -1
PSMC6-219ENST00000612399 EHBP1L1Q8N3D4 1523 aa8.82□□□□□ -1
PSMC6-219ENST00000612399 ABCA10Q8WWZ4 1543 aa8.82□□□□□ -1
PSMC6-219ENST00000612399 GAPVD1Q14C86 1478 aa8.82□□□□□ -1
PSMC6-219ENST00000612399 NCOA2Q15596 1464 aa8.82□□□□□ -1
PSMC6-219ENST00000612399 ABCA5Q8WWZ7 1642 aa8.82□□□□□ -1
PSMC6-219ENST00000612399 SMAPO00193 183 aa8.82□□□□□ -1
PSMC6-219ENST00000612399 FAM50AQ14320 339 aaKnown RBP8.82□□□□□ -1
PSMC6-219ENST00000612399 CYB5RLQ6IPT4 315 aa8.82□□□□□ -1
PSMC6-219ENST00000612399 BCANQ96GW7 911 aa8.82□□□□□ -1
PSMC6-219ENST00000612399 SAMD9Q5K651 1589 aa8.81□□□□□ -1
PSMC6-219ENST00000612399 SYNJ2O15056 1496 aa8.81□□□□□ -1
PSMC6-219ENST00000612399 POLR1AO95602 1720 aaPredicted RBP8.81□□□□□ -1
PSMC6-219ENST00000612399 CHMP7Q8WUX9 453 aaPredicted RBP8.81□□□□□ -1
PSMC6-219ENST00000612399 CDK11AQ9UQ88 783 aaPredicted RBP8.81□□□□□ -1
PSMC6-219ENST00000612399 TATDN2Q93075 761 aa8.8□□□□□ -1
PSMC6-219ENST00000612399 SIN3AQ96ST3 1273 aa8.8□□□□□ -1
PSMC6-219ENST00000612399 HDGFP51858 240 aaKnown RBP8.79□□□□□ -1
PSMC6-219ENST00000612399 NECTIN2Q92692 538 aa8.79□□□□□ -1
PSMC6-219ENST00000612399 FAM198AQ9UFP1 575 aa8.79□□□□□ -1
PSMC6-219ENST00000612399 PNMA3Q9UL41 463 aa8.79□□□□□ -1
PSMC6-219ENST00000612399 MYOM3Q5VTT5 1437 aa8.79□□□□□ -1
PSMC6-219ENST00000612399 KDM5BQ9UGL1 1544 aa8.79□□□□□ -1
PSMC6-219ENST00000612399 GGCXP38435 758 aa8.78□□□□□ -1
PSMC6-219ENST00000612399 ZNF787Q6DD87 383 aa8.78□□□□□ -1
PSMC6-219ENST00000612399 ERICH6Q7L0X2 663 aa8.78□□□□□ -1
PSMC6-219ENST00000612399 ZNF516Q92618 1163 aa8.78□□□□□ -1
PSMC6-219ENST00000612399 PDZRN3Q9UPQ7 1066 aa8.78□□□□□ -1
PSMC6-219ENST00000612399 NAIPQ13075 1403 aa8.77□□□□□ -1.01
PSMC6-219ENST00000612399 TCOF1Q13428 1488 aaKnown RBP8.77□□□□□ -1.01
PSMC6-219ENST00000612399 FHOD3Q2V2M9 1422 aa8.76□□□□□ -1.01
PSMC6-219ENST00000612399 CNTLNQ9NXG0 1405 aa8.76□□□□□ -1.01
PSMC6-219ENST00000612399 RNF40O75150 1001 aa8.76□□□□□ -1.01
PSMC6-219ENST00000612399 TRIM52Q96A61 297 aa8.76□□□□□ -1.01
PSMC6-219ENST00000612399 RBM27Q9P2N5 1060 aaKnown RBP8.76□□□□□ -1.01
PSMC6-219ENST00000612399 UGGT2Q9NYU1 1516 aa8.76□□□□□ -1.01
PSMC6-219ENST00000612399 MTUS2Q5JR59 1369 aa8.75□□□□□ -1.01
PSMC6-219ENST00000612399 APLP1P51693 650 aa8.75□□□□□ -1.01
PSMC6-219ENST00000612399 PPP4R2Q9NY27 417 aa8.75□□□□□ -1.01
PSMC6-219ENST00000612399 ADAMTS12P58397 1594 aa8.75□□□□□ -1.01
PSMC6-219ENST00000612399 C3orf80F5H4A9 247 aa8.74□□□□□ -1.01
PSMC6-219ENST00000612399 GRIN2AQ12879 1464 aa8.74□□□□□ -1.01
PSMC6-219ENST00000612399 LRRIQ1Q96JM4 1722 aa8.74□□□□□ -1.01
PSMC6-219ENST00000612399 TMUB1Q9BVT8 246 aa8.73□□□□□ -1.01
PSMC6-219ENST00000612399 HNRNPUQ00839 825 aaKnown RBP eCLIP8.73□□□□□ -1.01
PSMC6-219ENST00000612399 NUDT18Q6ZVK8 323 aa8.73□□□□□ -1.01
PSMC6-219ENST00000612399 SLF2Q8IX21 1173 aa8.72□□□□□ -1.01
PSMC6-219ENST00000612399 NKX2-3Q8TAU0 364 aa8.72□□□□□ -1.01
PSMC6-219ENST00000612399 ZBED9Q6R2W3 1325 aa8.72□□□□□ -1.01
PSMC6-219ENST00000612399 CEP170Q5SW79 1584 aa8.72□□□□□ -1.01
PSMC6-219ENST00000612399 NCOA1Q15788 1441 aa8.71□□□□□ -1.01
PSMC6-219ENST00000612399 MIA2Q96PC5 1412 aa8.71□□□□□ -1.01
PSMC6-219ENST00000612399 PRIM1P49642 420 aaKnown RBP8.71□□□□□ -1.02
PSMC6-219ENST00000612399 NUP160Q12769 1436 aa8.71□□□□□ -1.02
PSMC6-219ENST00000612399 ERCC6L2Q5T890 1561 aa8.7□□□□□ -1.02
PSMC6-219ENST00000612399 GRXCR2A6NFK2 248 aa8.7□□□□□ -1.02
PSMC6-219ENST00000612399 EIF4G2P78344 907 aaKnown RBP eCLIP8.7□□□□□ -1.02
PSMC6-219ENST00000612399 ARIH1Q9Y4X5 557 aaPredicted RBP8.7□□□□□ -1.02
PSMC6-219ENST00000612399 PTPRKQ15262 1439 aa8.7□□□□□ -1.02
PSMC6-219ENST00000612399 SLC4A3P48751 1232 aa8.69□□□□□ -1.02
PSMC6-219ENST00000612399 COPS2P61201 443 aa8.69□□□□□ -1.02
PSMC6-219ENST00000612399 ZNF775Q96BV0 537 aaPredicted RBP8.69□□□□□ -1.02
PSMC6-219ENST00000612399 CDHR5Q9HBB8 845 aa8.69□□□□□ -1.02
PSMC6-219ENST00000612399 E2F4Q16254 413 aa8.68□□□□□ -1.02
PSMC6-219ENST00000612399 SWT1Q5T5J6 900 aaKnown RBP8.68□□□□□ -1.02
PSMC6-219ENST00000612399 PRR14Q9BWN1 585 aa8.68□□□□□ -1.02
PSMC6-219ENST00000612399 WASHC2AQ641Q2 1341 aa8.68□□□□□ -1.02
PSMC6-219ENST00000612399 SHROOM2Q13796 1616 aa8.68□□□□□ -1.02
PSMC6-219ENST00000612399 ZPR1O75312 459 aa8.67□□□□□ -1.02
PSMC6-219ENST00000612399 CCDC7Q96M83 1385 aa8.67□□□□□ -1.02
PSMC6-219ENST00000612399 RPRD2Q5VT52 1461 aaKnown RBP8.66□□□□□ -1.02
PSMC6-219ENST00000612399 ROCK1Q13464 1354 aa8.66□□□□□ -1.02
PSMC6-219ENST00000612399 OSBPP22059 807 aa8.66□□□□□ -1.02
PSMC6-219ENST00000612399 TTC13Q8NBP0 860 aa8.66□□□□□ -1.02
PSMC6-219ENST00000612399 SMG6Q86US8 1419 aaKnown RBP8.66□□□□□ -1.02
PSMC6-219ENST00000612399 HSPA5P11021 654 aaKnown RBP8.65□□□□□ -1.02
PSMC6-219ENST00000612399 DENND4BO75064 1496 aaPredicted RBP8.65□□□□□ -1.02
PSMC6-219ENST00000612399 ARID4BQ4LE39 1312 aaPredicted RBP8.65□□□□□ -1.03
PSMC6-219ENST00000612399 BBXQ8WY36 941 aaPredicted RBP8.65□□□□□ -1.03
PSMC6-219ENST00000612399 HIRIP3Q9BW71 556 aaPredicted RBP8.65□□□□□ -1.03
PSMC6-219ENST00000612399 PRKRIP1Q9H875 184 aaPredicted RBP8.65□□□□□ -1.03
PSMC6-219ENST00000612399 ATP1B4Q9UN42 357 aaPredicted RBP8.65□□□□□ -1.03
PSMC6-219ENST00000612399 TEX14Q8IWB6 1497 aa8.64□□□□□ -1.03
PSMC6-219ENST00000612399 DNMT1P26358 1616 aaKnown RBP8.64□□□□□ -1.03
PSMC6-219ENST00000612399 SLC19A1P41440 591 aa8.64□□□□□ -1.03
PSMC6-219ENST00000612399 DGAT1O75907 488 aa8.63□□□□□ -1.03
PSMC6-219ENST00000612399 PKDCCQ504Y2 493 aa8.63□□□□□ -1.03
PSMC6-219ENST00000612399 PADI6Q6TGC4 694 aa8.63□□□□□ -1.03
PSMC6-219ENST00000612399 SPATA31E1Q6ZUB1 1445 aa8.63□□□□□ -1.03
PSMC6-219ENST00000612399 KIF14Q15058 1648 aa8.63□□□□□ -1.03
PSMC6-219ENST00000612399 TRIM67Q6ZTA4 783 aa8.62□□□□□ -1.03
PSMC6-219ENST00000612399 P3H3Q8IVL6 736 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms