RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 MFAP1P55081 439 aaKnown RBP11.15□□□□□ -0.62
CNOT1-222ENST00000570139 RGS22Q8NE09 1264 aa11.15□□□□□ -0.62
CNOT1-222ENST00000570139 FGD5Q6ZNL6 1462 aa11.14□□□□□ -0.63
CNOT1-222ENST00000570139 NBPF26B4DH59 902 aa11.14□□□□□ -0.63
CNOT1-222ENST00000570139 URB2Q14146 1524 aaKnown RBP11.14□□□□□ -0.63
CNOT1-222ENST00000570139 KCNA1Q09470 495 aa11.13□□□□□ -0.63
CNOT1-222ENST00000570139 ZBTB3Q9H5J0 574 aa11.13□□□□□ -0.63
CNOT1-222ENST00000570139 WDR62O43379 1518 aa11.13□□□□□ -0.63
CNOT1-222ENST00000570139 USP46P62068 366 aa11.12□□□□□ -0.63
CNOT1-222ENST00000570139 ERCC6Q03468 1493 aa11.12□□□□□ -0.63
CNOT1-222ENST00000570139 WDR97A6NE52 1622 aa11.11□□□□□ -0.63
CNOT1-222ENST00000570139 SNPHO15079 494 aa11.11□□□□□ -0.63
CNOT1-222ENST00000570139 BRD1O95696 1058 aa11.11□□□□□ -0.63
CNOT1-222ENST00000570139 CSB-PGBD3P0DP91 1061 aa11.11□□□□□ -0.63
CNOT1-222ENST00000570139 NDUFV2P19404 249 aa11.11□□□□□ -0.63
CNOT1-222ENST00000570139 RTL5Q5HYW3 569 aaPredicted RBP11.11□□□□□ -0.63
CNOT1-222ENST00000570139 TMEM134Q9H6X4 195 aa11.11□□□□□ -0.63
CNOT1-222ENST00000570139 PCDHB15Q9Y5E8 787 aa11.11□□□□□ -0.63
CNOT1-222ENST00000570139 KIF27Q86VH2 1401 aa11.1□□□□□ -0.63
CNOT1-222ENST00000570139 RIMBP2O15034 1052 aa11.1□□□□□ -0.63
CNOT1-222ENST00000570139 NUDT7P0C024 238 aa11.1□□□□□ -0.63
CNOT1-222ENST00000570139 RSPH4AQ5TD94 716 aa11.1□□□□□ -0.63
CNOT1-222ENST00000570139 HDGFL1Q5TGJ6 251 aa11.1□□□□□ -0.63
CNOT1-222ENST00000570139 MTMR7Q9Y216 660 aa11.1□□□□□ -0.63
CNOT1-222ENST00000570139 POLA1P09884 1462 aaPredicted RBP11.1□□□□□ -0.63
CNOT1-222ENST00000570139 THOC2Q8NI27 1593 aaKnown RBP11.1□□□□□ -0.63
CNOT1-222ENST00000570139 KIF21BO75037 1637 aa11.09□□□□□ -0.63
CNOT1-222ENST00000570139 PSDA5PKW4 1024 aaPredicted RBP11.09□□□□□ -0.63
CNOT1-222ENST00000570139 KDM4AO75164 1064 aa11.09□□□□□ -0.63
CNOT1-222ENST00000570139 DOK7Q18PE1 504 aa11.09□□□□□ -0.63
CNOT1-222ENST00000570139 PPP4R3BQ5MIZ7 849 aa11.09□□□□□ -0.63
CNOT1-222ENST00000570139 NUDT18Q6ZVK8 323 aa11.09□□□□□ -0.63
CNOT1-222ENST00000570139 RDH13Q8NBN7 331 aa11.09□□□□□ -0.63
CNOT1-222ENST00000570139 MARVELD3Q96A59 401 aa11.09□□□□□ -0.63
CNOT1-222ENST00000570139 FAM198AQ9UFP1 575 aa11.09□□□□□ -0.63
CNOT1-222ENST00000570139 ABCA10Q8WWZ4 1543 aa11.09□□□□□ -0.63
CNOT1-222ENST00000570139 SOGA1O94964 1423 aa11.09□□□□□ -0.63
CNOT1-222ENST00000570139 PPP1R3GB7ZBB8 358 aa11.08□□□□□ -0.64
CNOT1-222ENST00000570139 GJD4Q96KN9 370 aaPredicted RBP11.08□□□□□ -0.64
CNOT1-222ENST00000570139 ZSWIM6Q9HCJ5 1215 aa11.08□□□□□ -0.64
CNOT1-222ENST00000570139 PACS2Q86VP3 889 aa11.07□□□□□ -0.64
CNOT1-222ENST00000570139 CABLES1Q8TDN4 633 aa11.07□□□□□ -0.64
CNOT1-222ENST00000570139 TSKSQ9UJT2 592 aa11.07□□□□□ -0.64
CNOT1-222ENST00000570139 HELBQ8NG08 1087 aaPredicted RBP11.06□□□□□ -0.64
CNOT1-222ENST00000570139 TATDN2Q93075 761 aa11.06□□□□□ -0.64
CNOT1-222ENST00000570139 BCL2L12Q9HB09 334 aa11.06□□□□□ -0.64
CNOT1-222ENST00000570139 PNMA3Q9UL41 463 aa11.06□□□□□ -0.64
CNOT1-222ENST00000570139 ERICH3Q5RHP9 1530 aa11.05□□□□□ -0.64
CNOT1-222ENST00000570139 COL9A1P20849 921 aa11.05□□□□□ -0.64
CNOT1-222ENST00000570139 PTPREP23469 700 aa11.05□□□□□ -0.64
CNOT1-222ENST00000570139 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.04□□□□□ -0.64
CNOT1-222ENST00000570139 HOXA2O43364 376 aa11.04□□□□□ -0.64
CNOT1-222ENST00000570139 FDX1P10109 184 aa11.04□□□□□ -0.64
CNOT1-222ENST00000570139 RFX1P22670 979 aa11.04□□□□□ -0.64
CNOT1-222ENST00000570139 CFAP70Q5T0N1 1121 aa11.04□□□□□ -0.64
CNOT1-222ENST00000570139 PPP1R12CQ9BZL4 782 aa11.04□□□□□ -0.64
CNOT1-222ENST00000570139 TARBP1Q13395 1621 aaKnown RBP11.04□□□□□ -0.64
CNOT1-222ENST00000570139 CUX2O14529 1486 aa11.04□□□□□ -0.64
CNOT1-222ENST00000570139 ABCA5Q8WWZ7 1642 aa11.03□□□□□ -0.64
CNOT1-222ENST00000570139 TRIM6-TRIM34B2RNG4 842 aa11.03□□□□□ -0.64
CNOT1-222ENST00000570139 SOX11P35716 441 aa11.03□□□□□ -0.64
CNOT1-222ENST00000570139 ARSIQ5FYB1 569 aa11.03□□□□□ -0.64
CNOT1-222ENST00000570139 ADAMTS19Q8TE59 1207 aa11.03□□□□□ -0.64
CNOT1-222ENST00000570139 GOLGA3Q08378 1498 aa11.03□□□□□ -0.64
CNOT1-222ENST00000570139 CUL7Q14999 1698 aa11.03□□□□□ -0.64
CNOT1-222ENST00000570139 IFT140Q96RY7 1462 aa11.02□□□□□ -0.65
CNOT1-222ENST00000570139 RUSC2Q8N2Y8 1516 aa11.01□□□□□ -0.65
CNOT1-222ENST00000570139 GCGRP47871 477 aa11.01□□□□□ -0.65
CNOT1-222ENST00000570139 MTMR2Q13614 643 aa11□□□□□ -0.65
CNOT1-222ENST00000570139 FAM9AQ8IZU1 332 aaPredicted RBP11□□□□□ -0.65
CNOT1-222ENST00000570139 KRTAP3-3Q9BYR6 98 aa11□□□□□ -0.65
CNOT1-222ENST00000570139 KRTAP3-2Q9BYR7 98 aa11□□□□□ -0.65
CNOT1-222ENST00000570139 SRPK2P78362 688 aaKnown RBP10.99□□□□□ -0.65
CNOT1-222ENST00000570139 VAC14Q08AM6 782 aa10.99□□□□□ -0.65
CNOT1-222ENST00000570139 KHSRPQ92945 711 aaKnown RBP eCLIP10.99□□□□□ -0.65
CNOT1-222ENST00000570139 TRIM34Q9BYJ4 488 aa10.99□□□□□ -0.65
CNOT1-222ENST00000570139 HMX1Q9NP08 348 aaPredicted RBP10.99□□□□□ -0.65
CNOT1-222ENST00000570139 PRXQ9BXM0 1461 aa10.99□□□□□ -0.65
CNOT1-222ENST00000570139 RAD54L2Q9Y4B4 1467 aa10.99□□□□□ -0.65
CNOT1-222ENST00000570139 PALM3A6NDB9 673 aaPredicted RBP10.98□□□□□ -0.65
CNOT1-222ENST00000570139 RBM25P49756 843 aaKnown RBP10.98□□□□□ -0.65
CNOT1-222ENST00000570139 CTDSPL2Q05D32 466 aa10.98□□□□□ -0.65
CNOT1-222ENST00000570139 FOXD4L5Q5VV16 416 aaPredicted RBP10.98□□□□□ -0.65
CNOT1-222ENST00000570139 FOXD4L4Q8WXT5 416 aaPredicted RBP10.98□□□□□ -0.65
CNOT1-222ENST00000570139 ALG2Q9H553 416 aa10.98□□□□□ -0.65
CNOT1-222ENST00000570139 GPR153Q6NV75 609 aa10.97□□□□□ -0.65
CNOT1-222ENST00000570139 LHX6Q9UPM6 363 aa10.97□□□□□ -0.65
CNOT1-222ENST00000570139 PBRM1Q86U86 1689 aa10.97□□□□□ -0.65
CNOT1-222ENST00000570139 GPR37L1O60883 481 aa10.96□□□□□ -0.65
CNOT1-222ENST00000570139 LMOD1P29536 600 aaPredicted RBP10.96□□□□□ -0.65
CNOT1-222ENST00000570139 TSC1Q92574 1164 aa10.96□□□□□ -0.65
CNOT1-222ENST00000570139 GAPVD1Q14C86 1478 aa10.95□□□□□ -0.66
CNOT1-222ENST00000570139 C3orf80F5H4A9 247 aa10.95□□□□□ -0.66
CNOT1-222ENST00000570139 HOXB3P14651 431 aaPredicted RBP10.95□□□□□ -0.66
CNOT1-222ENST00000570139 SLC4A3P48751 1232 aa10.95□□□□□ -0.66
CNOT1-222ENST00000570139 EMP3P54852 163 aa10.95□□□□□ -0.66
CNOT1-222ENST00000570139 GRIPAP1Q4V328 841 aa10.95□□□□□ -0.66
CNOT1-222ENST00000570139 PNMA1Q8ND90 353 aa10.95□□□□□ -0.66
CNOT1-222ENST00000570139 PCDHGC3Q9UN70 934 aa10.95□□□□□ -0.66
CNOT1-222ENST00000570139 TNIKQ9UKE5 1360 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms