RNA–Protein interactions for RNA: ENST00000558103.1

CLPX-202, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 5

Gene CLPX, Length 605 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-202ENST00000558103 ACTN4O43707 911 aaKnown RBP11.25□□□□□ -0.61
CLPX-202ENST00000558103 CD46P15529 392 aa11.24□□□□□ -0.61
CLPX-202ENST00000558103 SSTR3P32745 418 aaPredicted RBP11.24□□□□□ -0.61
CLPX-202ENST00000558103 GCGRP47871 477 aa11.24□□□□□ -0.61
CLPX-202ENST00000558103 PARP9Q8IXQ6 854 aa11.23□□□□□ -0.61
CLPX-202ENST00000558103 TARBP1Q13395 1621 aaKnown RBP11.23□□□□□ -0.61
CLPX-202ENST00000558103 CHD1O14646 1710 aa11.22□□□□□ -0.61
CLPX-202ENST00000558103 ABCC8Q09428 1581 aa11.22□□□□□ -0.61
CLPX-202ENST00000558103 GIGYF2Q6Y7W6 1299 aaKnown RBP11.22□□□□□ -0.61
CLPX-202ENST00000558103 PRKD2Q9BZL6 878 aa11.22□□□□□ -0.61
CLPX-202ENST00000558103 TJAP1Q5JTD0 557 aa11.21□□□□□ -0.61
CLPX-202ENST00000558103 PCDHB3Q9Y5E6 796 aa11.21□□□□□ -0.61
CLPX-202ENST00000558103 MTRQ99707 1265 aa11.2□□□□□ -0.62
CLPX-202ENST00000558103 PRKCSHP14314 528 aaPredicted RBP11.18□□□□□ -0.62
CLPX-202ENST00000558103 IL21Q9HBE4 155 aa11.18□□□□□ -0.62
CLPX-202ENST00000558103 ARHGEF11O15085 1522 aa11.18□□□□□ -0.62
CLPX-202ENST00000558103 FUT2Q10981 343 aa11.17□□□□□ -0.62
CLPX-202ENST00000558103 KDM4AO75164 1064 aa11.16□□□□□ -0.62
CLPX-202ENST00000558103 MS4A1P11836 297 aa11.16□□□□□ -0.62
CLPX-202ENST00000558103 ATP6V1AP38606 617 aa11.16□□□□□ -0.62
CLPX-202ENST00000558103 COPS2P61201 443 aa11.16□□□□□ -0.62
CLPX-202ENST00000558103 POLA1P09884 1462 aaPredicted RBP11.15□□□□□ -0.62
CLPX-202ENST00000558103 BLOC1S3Q6QNY0 202 aa11.15□□□□□ -0.62
CLPX-202ENST00000558103 ZNF516Q92618 1163 aa11.15□□□□□ -0.62
CLPX-202ENST00000558103 PUS10Q3MIT2 529 aaKnown RBP11.14□□□□□ -0.63
CLPX-202ENST00000558103 BEGAINQ9BUH8 593 aa11.14□□□□□ -0.63
CLPX-202ENST00000558103 NR1I2O75469 434 aa11.13□□□□□ -0.63
CLPX-202ENST00000558103 GRIPAP1Q4V328 841 aa11.13□□□□□ -0.63
CLPX-202ENST00000558103 MORN1Q5T089 497 aa11.13□□□□□ -0.63
CLPX-202ENST00000558103 SCUBE3Q8IX30 993 aa11.13□□□□□ -0.63
CLPX-202ENST00000558103 WDR97A6NE52 1622 aa11.13□□□□□ -0.63
CLPX-202ENST00000558103 ZPR1O75312 459 aa11.12□□□□□ -0.63
CLPX-202ENST00000558103 USP46P62068 366 aa11.12□□□□□ -0.63
CLPX-202ENST00000558103 NUTM1Q86Y26 1132 aa11.12□□□□□ -0.63
CLPX-202ENST00000558103 AQRO60306 1485 aaKnown RBP eCLIP11.12□□□□□ -0.63
CLPX-202ENST00000558103 GPBP1L1Q9HC44 474 aaPredicted RBP11.11□□□□□ -0.63
CLPX-202ENST00000558103 SPIRE2Q8WWL2 714 aa11.1□□□□□ -0.63
CLPX-202ENST00000558103 PDZRN3Q9UPQ7 1066 aa11.1□□□□□ -0.63
CLPX-202ENST00000558103 KDM4CQ9H3R0 1056 aa11.09□□□□□ -0.63
CLPX-202ENST00000558103 SLC27A5Q9Y2P5 690 aa11.09□□□□□ -0.63
CLPX-202ENST00000558103 RAD54L2Q9Y4B4 1467 aa11.08□□□□□ -0.64
CLPX-202ENST00000558103 NKX2-3Q8TAU0 364 aa11.08□□□□□ -0.64
CLPX-202ENST00000558103 HOXA2O43364 376 aa11.07□□□□□ -0.64
CLPX-202ENST00000558103 FGD5Q6ZNL6 1462 aa11.06□□□□□ -0.64
CLPX-202ENST00000558103 ARAP1Q96P48 1450 aa11.06□□□□□ -0.64
CLPX-202ENST00000558103 CUX1P39880 1505 aa11.06□□□□□ -0.64
CLPX-202ENST00000558103 DIXDC1Q155Q3 683 aa11.06□□□□□ -0.64
CLPX-202ENST00000558103 PPP1R18Q6NYC8 613 aa11.06□□□□□ -0.64
CLPX-202ENST00000558103 V9GY48 417 aaPredicted RBP11.06□□□□□ -0.64
CLPX-202ENST00000558103 CLASP1Q7Z460 1538 aa11.05□□□□□ -0.64
CLPX-202ENST00000558103 PBRM1Q86U86 1689 aa11.05□□□□□ -0.64
CLPX-202ENST00000558103 NEUROD2Q15784 382 aa11.05□□□□□ -0.64
CLPX-202ENST00000558103 TBC1D2Q9BYX2 928 aa11.05□□□□□ -0.64
CLPX-202ENST00000558103 SALL2Q9Y467 1007 aaPredicted RBP11.05□□□□□ -0.64
CLPX-202ENST00000558103 THAP11Q96EK4 314 aa11.04□□□□□ -0.64
CLPX-202ENST00000558103 SNAPC4Q5SXM2 1469 aa11.04□□□□□ -0.64
CLPX-202ENST00000558103 SOGA1O94964 1423 aa11.03□□□□□ -0.64
CLPX-202ENST00000558103 BRPF1P55201 1214 aaPredicted RBP11.03□□□□□ -0.64
CLPX-202ENST00000558103 HLA-CQ95604 372 aa11.03□□□□□ -0.64
CLPX-202ENST00000558103 MAGI1Q96QZ7 1491 aaPredicted RBP11.02□□□□□ -0.65
CLPX-202ENST00000558103 MOXD2PA6NHM9 499 aa11.02□□□□□ -0.65
CLPX-202ENST00000558103 TLL1O43897 1013 aa11.02□□□□□ -0.65
CLPX-202ENST00000558103 FMNL1O95466 1100 aaPredicted RBP11.02□□□□□ -0.65
CLPX-202ENST00000558103 Q3C1V9 767 aa11.02□□□□□ -0.65
CLPX-202ENST00000558103 BRICD5Q6PL45 260 aa11.02□□□□□ -0.65
CLPX-202ENST00000558103 SPSB2Q99619 263 aa11.02□□□□□ -0.65
CLPX-202ENST00000558103 FAM117AQ9C073 453 aa11.02□□□□□ -0.65
CLPX-202ENST00000558103 POTECB2RU33 542 aa11.01□□□□□ -0.65
CLPX-202ENST00000558103 NDUFV2P19404 249 aa11.01□□□□□ -0.65
CLPX-202ENST00000558103 GUCA2AQ02747 115 aa11.01□□□□□ -0.65
CLPX-202ENST00000558103 SYNJ1O43426 1573 aa11.01□□□□□ -0.65
CLPX-202ENST00000558103 TDRD9Q8NDG6 1382 aaKnown RBP11.01□□□□□ -0.65
CLPX-202ENST00000558103 ABCA5Q8WWZ7 1642 aa11□□□□□ -0.65
CLPX-202ENST00000558103 ADH1BP00325 375 aa11□□□□□ -0.65
CLPX-202ENST00000558103 FDX1P10109 184 aa11□□□□□ -0.65
CLPX-202ENST00000558103 DDRGK1Q96HY6 314 aa11□□□□□ -0.65
CLPX-202ENST00000558103 RSPH6AQ9H0K4 717 aa11□□□□□ -0.65
CLPX-202ENST00000558103 GJA5P36382 358 aa10.99□□□□□ -0.65
CLPX-202ENST00000558103 PCDHGC3Q9UN70 934 aa10.99□□□□□ -0.65
CLPX-202ENST00000558103 SPTLC1O15269 473 aa10.98□□□□□ -0.65
CLPX-202ENST00000558103 CYB5RLQ6IPT4 315 aa10.98□□□□□ -0.65
CLPX-202ENST00000558103 RNF19BQ6ZMZ0 732 aa10.98□□□□□ -0.65
CLPX-202ENST00000558103 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.98□□□□□ -0.65
CLPX-202ENST00000558103 GRIN2BQ13224 1484 aa10.98□□□□□ -0.65
CLPX-202ENST00000558103 MYSM1Q5VVJ2 828 aa10.97□□□□□ -0.65
CLPX-202ENST00000558103 RIC3Q7Z5B4 369 aa10.97□□□□□ -0.65
CLPX-202ENST00000558103 FAM160A2Q8N612 972 aaPredicted RBP10.97□□□□□ -0.65
CLPX-202ENST00000558103 SYNJ2O15056 1496 aa10.97□□□□□ -0.65
CLPX-202ENST00000558103 PLEKHG3A1L390 1219 aa10.96□□□□□ -0.65
CLPX-202ENST00000558103 GGCXP38435 758 aa10.96□□□□□ -0.65
CLPX-202ENST00000558103 RSBN1LQ6PCB5 846 aaPredicted RBP10.96□□□□□ -0.65
CLPX-202ENST00000558103 SLC6A16Q9GZN6 736 aa10.96□□□□□ -0.65
CLPX-202ENST00000558103 USB1Q9BQ65 265 aaKnown RBP10.95□□□□□ -0.66
CLPX-202ENST00000558103 ABCA10Q8WWZ4 1543 aa10.94□□□□□ -0.66
CLPX-202ENST00000558103 S1PR4O95977 384 aa10.94□□□□□ -0.66
CLPX-202ENST00000558103 SYMPKQ92797 1274 aaKnown RBP10.94□□□□□ -0.66
CLPX-202ENST00000558103 PCDHB15Q9Y5E8 787 aa10.94□□□□□ -0.66
CLPX-202ENST00000558103 GAPVD1Q14C86 1478 aa10.93□□□□□ -0.66
CLPX-202ENST00000558103 IL27Q8NEV9 243 aa10.93□□□□□ -0.66
CLPX-202ENST00000558103 BIVM-ERCC5R4GMW8 1640 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms