RNA–Protein interactions for RNA: ENST00000521798.1

SPIDR-215, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 647 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-215ENST00000521798 RFX1P22670 979 aa11.53□□□□□ -0.56
SPIDR-215ENST00000521798 DCBLD2Q96PD2 775 aa11.53□□□□□ -0.56
SPIDR-215ENST00000521798 METRNQ9UJH8 293 aa11.53□□□□□ -0.56
SPIDR-215ENST00000521798 TSKSQ9UJT2 592 aa11.53□□□□□ -0.56
SPIDR-215ENST00000521798 CUX1P39880 1505 aa11.53□□□□□ -0.56
SPIDR-215ENST00000521798 IFT140Q96RY7 1462 aa11.52□□□□□ -0.56
SPIDR-215ENST00000521798 NUDT18Q6ZVK8 323 aa11.52□□□□□ -0.57
SPIDR-215ENST00000521798 PPP1R12CQ9BZL4 782 aa11.52□□□□□ -0.57
SPIDR-215ENST00000521798 POLA1P09884 1462 aaPredicted RBP11.51□□□□□ -0.57
SPIDR-215ENST00000521798 NBPF26B4DH59 902 aa11.51□□□□□ -0.57
SPIDR-215ENST00000521798 KDM4AO75164 1064 aa11.51□□□□□ -0.57
SPIDR-215ENST00000521798 NUDT7P0C024 238 aa11.51□□□□□ -0.57
SPIDR-215ENST00000521798 COL9A1P20849 921 aa11.51□□□□□ -0.57
SPIDR-215ENST00000521798 RBM25P49756 843 aaKnown RBP11.51□□□□□ -0.57
SPIDR-215ENST00000521798 GABBR2O75899 941 aa11.5□□□□□ -0.57
SPIDR-215ENST00000521798 USP46P62068 366 aa11.5□□□□□ -0.57
SPIDR-215ENST00000521798 TRIM34Q9BYJ4 488 aa11.5□□□□□ -0.57
SPIDR-215ENST00000521798 C3orf80F5H4A9 247 aa11.49□□□□□ -0.57
SPIDR-215ENST00000521798 ZNF428Q96B54 188 aa11.49□□□□□ -0.57
SPIDR-215ENST00000521798 HMX1Q9NP08 348 aaPredicted RBP11.49□□□□□ -0.57
SPIDR-215ENST00000521798 ZNF608Q9ULD9 1512 aaPredicted RBP11.49□□□□□ -0.57
SPIDR-215ENST00000521798 HOXA2O43364 376 aa11.48□□□□□ -0.57
SPIDR-215ENST00000521798 RDH13Q8NBN7 331 aa11.48□□□□□ -0.57
SPIDR-215ENST00000521798 FGD5Q6ZNL6 1462 aa11.48□□□□□ -0.57
SPIDR-215ENST00000521798 TARBP1Q13395 1621 aaKnown RBP11.47□□□□□ -0.57
SPIDR-215ENST00000521798 PPP1R3GB7ZBB8 358 aa11.47□□□□□ -0.57
SPIDR-215ENST00000521798 FDX1P10109 184 aa11.47□□□□□ -0.57
SPIDR-215ENST00000521798 TATDN2Q93075 761 aa11.47□□□□□ -0.57
SPIDR-215ENST00000521798 ALG2Q9H553 416 aa11.47□□□□□ -0.57
SPIDR-215ENST00000521798 PNMA3Q9UL41 463 aa11.47□□□□□ -0.57
SPIDR-215ENST00000521798 RAD54L2Q9Y4B4 1467 aa11.46□□□□□ -0.57
SPIDR-215ENST00000521798 PALM3A6NDB9 673 aaPredicted RBP11.46□□□□□ -0.57
SPIDR-215ENST00000521798 VAC14Q08AM6 782 aa11.46□□□□□ -0.57
SPIDR-215ENST00000521798 KHSRPQ92945 711 aaKnown RBP eCLIP11.46□□□□□ -0.57
SPIDR-215ENST00000521798 BCL2L12Q9HB09 334 aa11.46□□□□□ -0.57
SPIDR-215ENST00000521798 SOGA1O94964 1423 aa11.45□□□□□ -0.58
SPIDR-215ENST00000521798 WRNQ14191 1432 aaPredicted RBP eCLIP11.45□□□□□ -0.58
SPIDR-215ENST00000521798 CTDSPL2Q05D32 466 aa11.45□□□□□ -0.58
SPIDR-215ENST00000521798 GCGRP47871 477 aa11.44□□□□□ -0.58
SPIDR-215ENST00000521798 ARSIQ5FYB1 569 aa11.44□□□□□ -0.58
SPIDR-215ENST00000521798 HELBQ8NG08 1087 aaPredicted RBP11.44□□□□□ -0.58
SPIDR-215ENST00000521798 SYNJ1O43426 1573 aa11.43□□□□□ -0.58
SPIDR-215ENST00000521798 TRIM6-TRIM34B2RNG4 842 aa11.43□□□□□ -0.58
SPIDR-215ENST00000521798 LMOD1P29536 600 aaPredicted RBP11.43□□□□□ -0.58
SPIDR-215ENST00000521798 PPP4R3BQ5MIZ7 849 aa11.43□□□□□ -0.58
SPIDR-215ENST00000521798 PCDHGC3Q9UN70 934 aa11.43□□□□□ -0.58
SPIDR-215ENST00000521798 IVNS1ABPQ9Y6Y0 642 aa11.43□□□□□ -0.58
SPIDR-215ENST00000521798 TOP2BQ02880 1626 aa11.42□□□□□ -0.58
SPIDR-215ENST00000521798 CARNS1A5YM72 827 aa11.42□□□□□ -0.58
SPIDR-215ENST00000521798 SOX11P35716 441 aa11.42□□□□□ -0.58
SPIDR-215ENST00000521798 DOK7Q18PE1 504 aa11.42□□□□□ -0.58
SPIDR-215ENST00000521798 PACS2Q86VP3 889 aa11.42□□□□□ -0.58
SPIDR-215ENST00000521798 UCN2Q96RP3 112 aa11.42□□□□□ -0.58
SPIDR-215ENST00000521798 ZSWIM6Q9HCJ5 1215 aa11.42□□□□□ -0.58
SPIDR-215ENST00000521798 AQRO60306 1485 aaKnown RBP eCLIP11.42□□□□□ -0.58
SPIDR-215ENST00000521798 EIF4G3O43432 1585 aaKnown RBP11.41□□□□□ -0.58
SPIDR-215ENST00000521798 ATG7O95352 703 aa11.41□□□□□ -0.58
SPIDR-215ENST00000521798 CCDC27Q2M243 656 aa11.41□□□□□ -0.58
SPIDR-215ENST00000521798 BIVM-ERCC5R4GMW8 1640 aa11.41□□□□□ -0.58
SPIDR-215ENST00000521798 E9PSI1 815 aa11.4□□□□□ -0.58
SPIDR-215ENST00000521798 PTPREP23469 700 aa11.4□□□□□ -0.58
SPIDR-215ENST00000521798 MTMR2Q13614 643 aa11.4□□□□□ -0.58
SPIDR-215ENST00000521798 RSPH4AQ5TD94 716 aa11.4□□□□□ -0.58
SPIDR-215ENST00000521798 SND1Q7KZF4 910 aaKnown RBP eCLIP11.4□□□□□ -0.58
SPIDR-215ENST00000521798 LRRN4Q8WUT4 740 aa11.4□□□□□ -0.58
SPIDR-215ENST00000521798 VRTNQ9H8Y1 702 aa11.4□□□□□ -0.58
SPIDR-215ENST00000521798 AMOTL2Q9Y2J4 779 aa11.4□□□□□ -0.58
SPIDR-215ENST00000521798 TDRD9Q8NDG6 1382 aaKnown RBP11.4□□□□□ -0.59
SPIDR-215ENST00000521798 PSDA5PKW4 1024 aaPredicted RBP11.39□□□□□ -0.59
SPIDR-215ENST00000521798 TMEM88BA6NKF7 163 aa11.39□□□□□ -0.59
SPIDR-215ENST00000521798 GPR153Q6NV75 609 aa11.39□□□□□ -0.59
SPIDR-215ENST00000521798 TFIP11Q9UBB9 837 aaKnown RBP11.39□□□□□ -0.59
SPIDR-215ENST00000521798 LHX6Q9UPM6 363 aa11.39□□□□□ -0.59
SPIDR-215ENST00000521798 RIMBP2O15034 1052 aa11.38□□□□□ -0.59
SPIDR-215ENST00000521798 HOXB3P14651 431 aaPredicted RBP11.38□□□□□ -0.59
SPIDR-215ENST00000521798 GUCA2AQ02747 115 aa11.38□□□□□ -0.59
SPIDR-215ENST00000521798 PRR7Q8TB68 274 aa11.38□□□□□ -0.59
SPIDR-215ENST00000521798 ABCA10Q8WWZ4 1543 aa11.37□□□□□ -0.59
SPIDR-215ENST00000521798 HLA-CQ95604 372 aa11.37□□□□□ -0.59
SPIDR-215ENST00000521798 WDR97A6NE52 1622 aa11.37□□□□□ -0.59
SPIDR-215ENST00000521798 CFAP99D6REC4 459 aa11.36□□□□□ -0.59
SPIDR-215ENST00000521798 SMAPO00193 183 aa11.36□□□□□ -0.59
SPIDR-215ENST00000521798 TSC1Q92574 1164 aa11.36□□□□□ -0.59
SPIDR-215ENST00000521798 MAFBQ9Y5Q3 323 aaPredicted RBP11.36□□□□□ -0.59
SPIDR-215ENST00000521798 EPS8L1Q8TE68 723 aa11.34□□□□□ -0.59
SPIDR-215ENST00000521798 SLC10A3P09131 477 aa11.33□□□□□ -0.6
SPIDR-215ENST00000521798 SEMA3FQ13275 785 aa11.33□□□□□ -0.6
SPIDR-215ENST00000521798 GNEQ9Y223 722 aaKnown RBP11.33□□□□□ -0.6
SPIDR-215ENST00000521798 CDCA8Q53HL2 280 aa11.32□□□□□ -0.6
SPIDR-215ENST00000521798 GRIN2BQ13224 1484 aa11.32□□□□□ -0.6
SPIDR-215ENST00000521798 GAPVD1Q14C86 1478 aa11.32□□□□□ -0.6
SPIDR-215ENST00000521798 ABCA5Q8WWZ7 1642 aa11.31□□□□□ -0.6
SPIDR-215ENST00000521798 B4GALNT3Q6L9W6 998 aa11.31□□□□□ -0.6
SPIDR-215ENST00000521798 SLF2Q8IX21 1173 aa11.31□□□□□ -0.6
SPIDR-215ENST00000521798 SNAPC4Q5SXM2 1469 aa11.31□□□□□ -0.6
SPIDR-215ENST00000521798 IGSF3O75054 1194 aa11.3□□□□□ -0.6
SPIDR-215ENST00000521798 PROX2Q3B8N5 592 aa11.3□□□□□ -0.6
SPIDR-215ENST00000521798 TBC1D9Q6ZT07 1266 aa11.3□□□□□ -0.6
SPIDR-215ENST00000521798 C6orf229H3BNL8 230 aa11.29□□□□□ -0.6
SPIDR-215ENST00000521798 ATP9BO43861 1147 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms