RNA–Protein interactions for RNA: ENST00000521798.1

SPIDR-215, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 647 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-215ENST00000521798 CHIC1Q5VXU3 224 aa24.25■■□□□ 1.47
SPIDR-215ENST00000521798 AEBP2Q6ZN18 517 aaPredicted RBP23.77■■□□□ 1.4
SPIDR-215ENST00000521798 PHF23Q9BUL5 403 aaPredicted RBP21.44■■□□□ 1.02
SPIDR-215ENST00000521798 PLPPR3Q6T4P5 718 aa20.16■□□□□ 0.82
SPIDR-215ENST00000521798 SENP3Q9H4L4 574 aaPredicted RBP19.99■□□□□ 0.79
SPIDR-215ENST00000521798 ADRA2BP18089 450 aa18.83■□□□□ 0.6
SPIDR-215ENST00000521798 KCNA4P22459 653 aa18.7■□□□□ 0.58
SPIDR-215ENST00000521798 EHMT2Q96KQ7 1210 aa18.69■□□□□ 0.58
SPIDR-215ENST00000521798 PPP6R1Q9UPN7 881 aa18.55■□□□□ 0.56
SPIDR-215ENST00000521798 FOXD1Q16676 465 aa18.42■□□□□ 0.54
SPIDR-215ENST00000521798 CSRNP3Q8WYN3 585 aa18.01■□□□□ 0.47
SPIDR-215ENST00000521798 SLC4A1APQ9BWU0 796 aaKnown RBP17.99■□□□□ 0.47
SPIDR-215ENST00000521798 PPP4R3CPQ6ZMV5 832 aa17.89■□□□□ 0.45
SPIDR-215ENST00000521798 NCBP3Q53F19 620 aaKnown RBP17.73■□□□□ 0.43
SPIDR-215ENST00000521798 PIAS4Q8N2W9 510 aaPredicted RBP17.62■□□□□ 0.41
SPIDR-215ENST00000521798 NPM3O75607 178 aaKnown RBP17.49■□□□□ 0.39
SPIDR-215ENST00000521798 ZBTB22O15209 634 aa17.24■□□□□ 0.35
SPIDR-215ENST00000521798 CNKSR2Q8WXI2 1034 aa17.16■□□□□ 0.34
SPIDR-215ENST00000521798 SCAF1Q9H7N4 1312 aaKnown RBP16.99■□□□□ 0.31
SPIDR-215ENST00000521798 FOXD4L1Q9NU39 408 aa16.91■□□□□ 0.3
SPIDR-215ENST00000521798 DNAJC5BQ9UF47 199 aa16.88■□□□□ 0.29
SPIDR-215ENST00000521798 SLC24A1O60721 1099 aa16.79■□□□□ 0.28
SPIDR-215ENST00000521798 AMER1Q5JTC6 1135 aaPredicted RBP16.66■□□□□ 0.26
SPIDR-215ENST00000521798 RTN4Q9NQC3 1192 aaKnown RBP16.65■□□□□ 0.26
SPIDR-215ENST00000521798 RNF216Q9NWF9 866 aaPredicted RBP16.57■□□□□ 0.24
SPIDR-215ENST00000521798 MSH5O43196 834 aa16.56■□□□□ 0.24
SPIDR-215ENST00000521798 MAPK8IP2Q13387 824 aaPredicted RBP16.54■□□□□ 0.24
SPIDR-215ENST00000521798 SLC4A2P04920 1241 aa16.26■□□□□ 0.19
SPIDR-215ENST00000521798 ATXN8OSP0DMR3 200 aa16.24■□□□□ 0.19
SPIDR-215ENST00000521798 HOXD11P31277 338 aaPredicted RBP16.23■□□□□ 0.19
SPIDR-215ENST00000521798 FKBP8Q14318 412 aa16.2■□□□□ 0.18
SPIDR-215ENST00000521798 MYCNP04198 464 aaPredicted RBP16.14■□□□□ 0.17
SPIDR-215ENST00000521798 DMRT2Q9Y5R5 561 aa16.13■□□□□ 0.17
SPIDR-215ENST00000521798 NISCHQ9Y2I1 1504 aa15.94■□□□□ 0.14
SPIDR-215ENST00000521798 ATF5Q9Y2D1 282 aaPredicted RBP15.62■□□□□ 0.09
SPIDR-215ENST00000521798 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.49■□□□□ 0.07
SPIDR-215ENST00000521798 HNRNPUL2Q1KMD3 747 aaKnown RBP15.49■□□□□ 0.07
SPIDR-215ENST00000521798 SAMD1Q6SPF0 538 aaPredicted RBP15.49■□□□□ 0.07
SPIDR-215ENST00000521798 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.42■□□□□ 0.064e-6■■■□□ 17.3
SPIDR-215ENST00000521798 PLCB2Q00722 1185 aa15.33■□□□□ 0.04
SPIDR-215ENST00000521798 FBXO3Q9UK99 471 aa15.33■□□□□ 0.04
SPIDR-215ENST00000521798 U3KPZ7 1027 aaPredicted RBP15.33■□□□□ 0.04
SPIDR-215ENST00000521798 DCAF8L1A6NGE4 600 aa15.32■□□□□ 0.04
SPIDR-215ENST00000521798 ZNF219Q9P2Y4 722 aaPredicted RBP15.23■□□□□ 0.03
SPIDR-215ENST00000521798 SPDYE4A6NLX3 237 aa15.17■□□□□ 0.02
SPIDR-215ENST00000521798 PROM2Q8N271 834 aa15.13■□□□□ 0.01
SPIDR-215ENST00000521798 VASPP50552 380 aaPredicted RBP15.11■□□□□ 0.01
SPIDR-215ENST00000521798 HAP1P54257 671 aaPredicted RBP15.09■□□□□ 0.01
SPIDR-215ENST00000521798 APLP2Q06481 763 aa15.07■□□□□ 0
SPIDR-215ENST00000521798 MKRN4PQ13434 485 aaPredicted RBP15.01□□□□□ -0.01
SPIDR-215ENST00000521798 BCANQ96GW7 911 aa14.99□□□□□ -0.01
SPIDR-215ENST00000521798 IFNLR1Q8IU57 520 aaPredicted RBP14.98□□□□□ -0.01
SPIDR-215ENST00000521798 DCAF8L2P0C7V8 631 aa14.97□□□□□ -0.01
SPIDR-215ENST00000521798 VSIG10Q8N0Z9 540 aa14.91□□□□□ -0.02
SPIDR-215ENST00000521798 PKD2Q13563 968 aa14.9□□□□□ -0.02
SPIDR-215ENST00000521798 FBLN2P98095 1184 aa14.88□□□□□ -0.03
SPIDR-215ENST00000521798 PRKCSHP14314 528 aaPredicted RBP14.82□□□□□ -0.04
SPIDR-215ENST00000521798 TAOK2Q9UL54 1235 aa14.82□□□□□ -0.04
SPIDR-215ENST00000521798 BBXQ8WY36 941 aaPredicted RBP14.69□□□□□ -0.06
SPIDR-215ENST00000521798 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.69□□□□□ -0.06
SPIDR-215ENST00000521798 KDM2AQ9Y2K7 1162 aa14.64□□□□□ -0.07
SPIDR-215ENST00000521798 POLA2Q14181 598 aa14.63□□□□□ -0.07
SPIDR-215ENST00000521798 TRHP20396 242 aaPredicted RBP14.62□□□□□ -0.07
SPIDR-215ENST00000521798 SPOCK2Q92563 424 aa14.62□□□□□ -0.07
SPIDR-215ENST00000521798 ECM2O94769 699 aaPredicted RBP14.59□□□□□ -0.07
SPIDR-215ENST00000521798 PAXIP1Q6ZW49 1069 aaPredicted RBP14.58□□□□□ -0.08
SPIDR-215ENST00000521798 NPM1P06748 294 aaKnown RBP eCLIP14.57□□□□□ -0.08
SPIDR-215ENST00000521798 TPRNQ4KMQ1 711 aa14.57□□□□□ -0.08
SPIDR-215ENST00000521798 SPINK5Q9NQ38 1064 aaPredicted RBP14.57□□□□□ -0.08
SPIDR-215ENST00000521798 KLHL34Q8N239 644 aa14.55□□□□□ -0.08
SPIDR-215ENST00000521798 CFAP44Q96MT7 982 aa14.52□□□□□ -0.09
SPIDR-215ENST00000521798 ZBTB12Q9Y330 459 aaPredicted RBP14.51□□□□□ -0.09
SPIDR-215ENST00000521798 CAPN15O75808 1086 aa14.44□□□□□ -0.1
SPIDR-215ENST00000521798 RGL2O15211 777 aa14.43□□□□□ -0.1
SPIDR-215ENST00000521798 STAG3Q9UJ98 1225 aa14.43□□□□□ -0.1
SPIDR-215ENST00000521798 SPRYD3Q8NCJ5 442 aa14.42□□□□□ -0.1
SPIDR-215ENST00000521798 TSHZ2Q9NRE2 1034 aa14.37□□□□□ -0.11
SPIDR-215ENST00000521798 PLCD3Q8N3E9 789 aa14.35□□□□□ -0.11
SPIDR-215ENST00000521798 RNF39Q9H2S5 420 aa14.31□□□□□ -0.12
SPIDR-215ENST00000521798 ZNF692Q9BU19 519 aaPredicted RBP14.28□□□□□ -0.12
SPIDR-215ENST00000521798 ABCB7O75027 752 aa14.26□□□□□ -0.13
SPIDR-215ENST00000521798 CHGAP10645 457 aaKnown RBP14.25□□□□□ -0.13
SPIDR-215ENST00000521798 DNAJC5Q9H3Z4 198 aa14.25□□□□□ -0.13
SPIDR-215ENST00000521798 MIER1Q8N108 512 aa14.23□□□□□ -0.13
SPIDR-215ENST00000521798 SSUH2Q9Y2M2 353 aa14.23□□□□□ -0.13
SPIDR-215ENST00000521798 SPDYE2BA6NHP3 402 aa14.2□□□□□ -0.14
SPIDR-215ENST00000521798 SPDYE6P0CI01 402 aa14.2□□□□□ -0.14
SPIDR-215ENST00000521798 SPDYE2Q495Y8 402 aa14.2□□□□□ -0.14
SPIDR-215ENST00000521798 NBR1Q14596 966 aa14.19□□□□□ -0.14
SPIDR-215ENST00000521798 C1QBPQ07021 282 aaKnown RBP14.18□□□□□ -0.14
SPIDR-215ENST00000521798 CIZ1Q9ULV3 898 aaPredicted RBP14.18□□□□□ -0.14
SPIDR-215ENST00000521798 TRIM41Q8WV44 630 aa14.15□□□□□ -0.14
SPIDR-215ENST00000521798 PABPN1Q86U42 306 aaKnown RBP eCLIP14.14□□□□□ -0.15
SPIDR-215ENST00000521798 ZBTB47Q9UFB7 747 aaPredicted RBP14.14□□□□□ -0.15
SPIDR-215ENST00000521798 HS6ST3Q8IZP7 471 aa14.13□□□□□ -0.15
SPIDR-215ENST00000521798 CCDC180Q9P1Z9 1646 aa14.12□□□□□ -0.15
SPIDR-215ENST00000521798 OSCARQ8IYS5 282 aa14.12□□□□□ -0.15
SPIDR-215ENST00000521798 PLEKHG5O94827 1062 aa14.09□□□□□ -0.15
SPIDR-215ENST00000521798 DSG3P32926 999 aa13.98□□□□□ -0.17
SPIDR-215ENST00000521798 RNF25Q96BH1 459 aaPredicted RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms