RNA–Protein interactions for RNA: ENST00000516173.1

RN7SKP43-201, Transcript of RNA, 7SK small nuclear pseudogene 43, humanhuman

BASIC

Gene RN7SKP43, Length 320 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP43-201ENST00000516173 HMGXB3Q12766 1538 aa4.61□□□□□ -1.67
RN7SKP43-201ENST00000516173 BIVM-ERCC5R4GMW8 1640 aa4.61□□□□□ -1.67
RN7SKP43-201ENST00000516173 PPARGC1BQ86YN6 1023 aaKnown RBP4.6□□□□□ -1.67
RN7SKP43-201ENST00000516173 NCAPD3P42695 1498 aa4.6□□□□□ -1.67
RN7SKP43-201ENST00000516173 TOP2BQ02880 1626 aa4.6□□□□□ -1.67
RN7SKP43-201ENST00000516173 FOXK2Q01167 660 aa4.59□□□□□ -1.67
RN7SKP43-201ENST00000516173 SNIP1Q8TAD8 396 aaKnown RBP4.59□□□□□ -1.67
RN7SKP43-201ENST00000516173 RYDENQ9NUL5 291 aaKnown RBP4.59□□□□□ -1.67
RN7SKP43-201ENST00000516173 ERICH3Q5RHP9 1530 aa4.58□□□□□ -1.68
RN7SKP43-201ENST00000516173 SOGA1O94964 1423 aa4.58□□□□□ -1.68
RN7SKP43-201ENST00000516173 ADAM23O75077 832 aa4.58□□□□□ -1.68
RN7SKP43-201ENST00000516173 UBTFP17480 764 aaKnown RBP4.58□□□□□ -1.68
RN7SKP43-201ENST00000516173 HS6ST3Q8IZP7 471 aa4.58□□□□□ -1.68
RN7SKP43-201ENST00000516173 RBM27Q9P2N5 1060 aaKnown RBP4.58□□□□□ -1.68
RN7SKP43-201ENST00000516173 CLSPNQ9HAW4 1339 aa4.57□□□□□ -1.68
RN7SKP43-201ENST00000516173 DPYSL4O14531 572 aa4.57□□□□□ -1.68
RN7SKP43-201ENST00000516173 ACTN4O43707 911 aaKnown RBP4.57□□□□□ -1.68
RN7SKP43-201ENST00000516173 NR1I2O75469 434 aa4.57□□□□□ -1.68
RN7SKP43-201ENST00000516173 KMT5BQ4FZB7 885 aa4.57□□□□□ -1.68
RN7SKP43-201ENST00000516173 CCER1Q8TC90 406 aaPredicted RBP4.57□□□□□ -1.68
RN7SKP43-201ENST00000516173 HPS1Q92902 700 aa4.57□□□□□ -1.68
RN7SKP43-201ENST00000516173 SYNJ1O43426 1573 aa4.57□□□□□ -1.68
RN7SKP43-201ENST00000516173 J3QL48 77 aa4.56□□□□□ -1.68
RN7SKP43-201ENST00000516173 WNT7AO00755 349 aa4.56□□□□□ -1.68
RN7SKP43-201ENST00000516173 VSIG8P0DPA2 414 aa4.56□□□□□ -1.68
RN7SKP43-201ENST00000516173 BTBD11A6QL63 1104 aa4.55□□□□□ -1.68
RN7SKP43-201ENST00000516173 FCF1Q9Y324 198 aaKnown RBP4.55□□□□□ -1.68
RN7SKP43-201ENST00000516173 VPS8Q8N3P4 1428 aa4.55□□□□□ -1.68
RN7SKP43-201ENST00000516173 ADAMTS8Q9UP79 889 aa4.54□□□□□ -1.68
RN7SKP43-201ENST00000516173 RUSC2Q8N2Y8 1516 aa4.54□□□□□ -1.68
RN7SKP43-201ENST00000516173 CLIP1P30622 1438 aa4.54□□□□□ -1.68
RN7SKP43-201ENST00000516173 Q8N3U1 123 aa4.53□□□□□ -1.68
RN7SKP43-201ENST00000516173 SPSB2Q99619 263 aa4.53□□□□□ -1.68
RN7SKP43-201ENST00000516173 CFTRP13569 1480 aa4.53□□□□□ -1.68
RN7SKP43-201ENST00000516173 MAP3K1Q13233 1512 aa4.52□□□□□ -1.69
RN7SKP43-201ENST00000516173 PRXQ9BXM0 1461 aa4.52□□□□□ -1.69
RN7SKP43-201ENST00000516173 CFHP08603 1231 aa4.52□□□□□ -1.69
RN7SKP43-201ENST00000516173 BMP1P13497 986 aa4.52□□□□□ -1.69
RN7SKP43-201ENST00000516173 KRTAP4-12Q9BQ66 201 aa4.52□□□□□ -1.69
RN7SKP43-201ENST00000516173 KIF27Q86VH2 1401 aa4.52□□□□□ -1.69
RN7SKP43-201ENST00000516173 KRTAP4-8A0A0G2JLE6 195 aa4.51□□□□□ -1.69
RN7SKP43-201ENST00000516173 ZBTB24O43167 697 aaPredicted RBP4.51□□□□□ -1.69
RN7SKP43-201ENST00000516173 CENPBP07199 599 aaPredicted RBP4.51□□□□□ -1.69
RN7SKP43-201ENST00000516173 IRS1P35568 1242 aa4.51□□□□□ -1.69
RN7SKP43-201ENST00000516173 CAMK2BQ13554 666 aa4.51□□□□□ -1.69
RN7SKP43-201ENST00000516173 TRIM46Q7Z4K8 759 aa4.51□□□□□ -1.69
RN7SKP43-201ENST00000516173 MRGPRX2Q96LB1 330 aa4.51□□□□□ -1.69
RN7SKP43-201ENST00000516173 KRTAP9-9Q9BYP9 154 aa4.51□□□□□ -1.69
RN7SKP43-201ENST00000516173 KRTAP9-4Q9BYQ2 154 aa4.51□□□□□ -1.69
RN7SKP43-201ENST00000516173 NKX1-1Q15270 411 aaPredicted RBP4.5□□□□□ -1.69
RN7SKP43-201ENST00000516173 DIEXFQ68CQ4 756 aaKnown RBP4.5□□□□□ -1.69
RN7SKP43-201ENST00000516173 KANK3Q6NY19 840 aa4.5□□□□□ -1.69
RN7SKP43-201ENST00000516173 SCUBE3Q8IX30 993 aa4.5□□□□□ -1.69
RN7SKP43-201ENST00000516173 TTC13Q8NBP0 860 aa4.5□□□□□ -1.69
RN7SKP43-201ENST00000516173 REPIN1Q9BWE0 567 aaKnown RBP4.5□□□□□ -1.69
RN7SKP43-201ENST00000516173 CDHR5Q9HBB8 845 aa4.5□□□□□ -1.69
RN7SKP43-201ENST00000516173 RAPGEF2Q9Y4G8 1499 aa4.49□□□□□ -1.69
RN7SKP43-201ENST00000516173 PRIM1P49642 420 aaKnown RBP4.49□□□□□ -1.69
RN7SKP43-201ENST00000516173 PKD2Q13563 968 aa4.49□□□□□ -1.69
RN7SKP43-201ENST00000516173 PADI6Q6TGC4 694 aa4.49□□□□□ -1.69
RN7SKP43-201ENST00000516173 MSTNO14793 375 aa4.48□□□□□ -1.69
RN7SKP43-201ENST00000516173 EYA1Q99502 592 aa4.48□□□□□ -1.69
RN7SKP43-201ENST00000516173 CUX1P39880 1505 aa4.47□□□□□ -1.69
RN7SKP43-201ENST00000516173 PDIA6Q15084 440 aa4.47□□□□□ -1.69
RN7SKP43-201ENST00000516173 DNAJC5Q9H3Z4 198 aa4.47□□□□□ -1.69
RN7SKP43-201ENST00000516173 TIMELESSQ9UNS1 1208 aa4.47□□□□□ -1.69
RN7SKP43-201ENST00000516173 CADPSQ9ULU8 1353 aa4.47□□□□□ -1.69
RN7SKP43-201ENST00000516173 ACIN1Q9UKV3 1341 aaKnown RBP4.46□□□□□ -1.69
RN7SKP43-201ENST00000516173 CUX2O14529 1486 aa4.46□□□□□ -1.7
RN7SKP43-201ENST00000516173 DNAJB2P25686 324 aa4.46□□□□□ -1.7
RN7SKP43-201ENST00000516173 TRIM32Q13049 653 aa4.46□□□□□ -1.7
RN7SKP43-201ENST00000516173 RRBP1Q9P2E9 1410 aaKnown RBP4.46□□□□□ -1.7
RN7SKP43-201ENST00000516173 CAPN5O15484 640 aaPredicted RBP4.45□□□□□ -1.7
RN7SKP43-201ENST00000516173 CHGAP10645 457 aaKnown RBP4.45□□□□□ -1.7
RN7SKP43-201ENST00000516173 ZFP42Q96MM3 310 aa4.45□□□□□ -1.7
RN7SKP43-201ENST00000516173 SPOCK3Q9BQ16 436 aa4.45□□□□□ -1.7
RN7SKP43-201ENST00000516173 CC2D2AQ9P2K1 1620 aa4.45□□□□□ -1.7
RN7SKP43-201ENST00000516173 FHAD1B1AJZ9 1412 aa4.45□□□□□ -1.7
RN7SKP43-201ENST00000516173 CUL7Q14999 1698 aa4.45□□□□□ -1.7
RN7SKP43-201ENST00000516173 IGF1RP08069 1367 aa4.44□□□□□ -1.7
RN7SKP43-201ENST00000516173 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.44□□□□□ -1.7
RN7SKP43-201ENST00000516173 K7ELQ4 463 aaPredicted RBP4.44□□□□□ -1.7
RN7SKP43-201ENST00000516173 PUS10Q3MIT2 529 aaKnown RBP4.44□□□□□ -1.7
RN7SKP43-201ENST00000516173 SVOPQ8N4V2 548 aa4.44□□□□□ -1.7
RN7SKP43-201ENST00000516173 TMEM134Q9H6X4 195 aa4.44□□□□□ -1.7
RN7SKP43-201ENST00000516173 ARAP1Q96P48 1450 aa4.43□□□□□ -1.7
RN7SKP43-201ENST00000516173 AQRO60306 1485 aaKnown RBP eCLIP4.43□□□□□ -1.7
RN7SKP43-201ENST00000516173 CARMIL1Q5VZK9 1371 aa4.42□□□□□ -1.7
RN7SKP43-201ENST00000516173 EFCAB5A4FU69 1503 aa4.42□□□□□ -1.7
RN7SKP43-201ENST00000516173 CTTNBP2Q8WZ74 1663 aa4.42□□□□□ -1.7
RN7SKP43-201ENST00000516173 SPDYE16A6NNV3 312 aaPredicted RBP4.42□□□□□ -1.7
RN7SKP43-201ENST00000516173 ALDH1A1P00352 501 aa4.42□□□□□ -1.7
RN7SKP43-201ENST00000516173 MARSP56192 900 aaKnown RBP4.42□□□□□ -1.7
RN7SKP43-201ENST00000516173 PLA2G4EQ3MJ16 856 aa4.42□□□□□ -1.7
RN7SKP43-201ENST00000516173 ZNF385CQ66K41 422 aaPredicted RBP4.42□□□□□ -1.7
RN7SKP43-201ENST00000516173 DNMBPQ6XZF7 1577 aa4.42□□□□□ -1.7
RN7SKP43-201ENST00000516173 GALNT6Q8NCL4 622 aa4.42□□□□□ -1.7
RN7SKP43-201ENST00000516173 SCARF2Q96GP6 870 aaPredicted RBP4.42□□□□□ -1.7
RN7SKP43-201ENST00000516173 PRDM9Q9NQV7 894 aa4.42□□□□□ -1.7
RN7SKP43-201ENST00000516173 LAMC3Q9Y6N6 1575 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms