RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 SOWAHBA6NEL2 793 aa9.16□□□□□ -0.94
COPS3-204ENST00000462236 KMT5BQ4FZB7 885 aa9.16□□□□□ -0.94
COPS3-204ENST00000462236 RSBN1LQ6PCB5 846 aaPredicted RBP9.15□□□□□ -0.94
COPS3-204ENST00000462236 POLR3EQ9NVU0 708 aa9.15□□□□□ -0.94
COPS3-204ENST00000462236 TARBP1Q13395 1621 aaKnown RBP9.15□□□□□ -0.94
COPS3-204ENST00000462236 TOPBP1Q92547 1522 aa9.15□□□□□ -0.95
COPS3-204ENST00000462236 CFHP08603 1231 aa9.14□□□□□ -0.95
COPS3-204ENST00000462236 PRPF38BQ5VTL8 546 aaKnown RBP9.14□□□□□ -0.95
COPS3-204ENST00000462236 CDAN1Q8IWY9 1227 aa9.14□□□□□ -0.95
COPS3-204ENST00000462236 RSF1Q96T23 1441 aaPredicted RBP9.14□□□□□ -0.95
COPS3-204ENST00000462236 HOXA2O43364 376 aa9.13□□□□□ -0.95
COPS3-204ENST00000462236 PPP2R2DQ66LE6 453 aa9.13□□□□□ -0.95
COPS3-204ENST00000462236 CYB5RLQ6IPT4 315 aa9.13□□□□□ -0.95
COPS3-204ENST00000462236 WNT2BQ93097 391 aa9.13□□□□□ -0.95
COPS3-204ENST00000462236 TSR3Q9UJK0 312 aaKnown RBP9.13□□□□□ -0.95
COPS3-204ENST00000462236 MOXD2PA6NHM9 499 aa9.12□□□□□ -0.95
COPS3-204ENST00000462236 ACTN4O43707 911 aaKnown RBP9.12□□□□□ -0.95
COPS3-204ENST00000462236 RNF40O75150 1001 aa9.12□□□□□ -0.95
COPS3-204ENST00000462236 PPP4CP60510 307 aa9.12□□□□□ -0.95
COPS3-204ENST00000462236 FLIIQ13045 1269 aa9.12□□□□□ -0.95
COPS3-204ENST00000462236 PROCA1Q8NCQ7 364 aaPredicted RBP9.12□□□□□ -0.95
COPS3-204ENST00000462236 PCDH10Q9P2E7 1040 aa9.12□□□□□ -0.95
COPS3-204ENST00000462236 ATP6V1AP38606 617 aa9.11□□□□□ -0.95
COPS3-204ENST00000462236 LIMD1Q9UGP4 676 aa9.11□□□□□ -0.95
COPS3-204ENST00000462236 NYAP1Q6ZVC0 841 aa9.1□□□□□ -0.95
COPS3-204ENST00000462236 ATP1B4Q9UN42 357 aaPredicted RBP9.1□□□□□ -0.95
COPS3-204ENST00000462236 DNMBPQ6XZF7 1577 aa9.1□□□□□ -0.95
COPS3-204ENST00000462236 ABCC8Q09428 1581 aa9.09□□□□□ -0.95
COPS3-204ENST00000462236 FDX1P10109 184 aa9.09□□□□□ -0.95
COPS3-204ENST00000462236 FUT2Q10981 343 aa9.09□□□□□ -0.95
COPS3-204ENST00000462236 TMEM259Q4ZIN3 620 aa9.09□□□□□ -0.95
COPS3-204ENST00000462236 HPS5Q9UPZ3 1129 aa9.09□□□□□ -0.95
COPS3-204ENST00000462236 CLASP1Q7Z460 1538 aa9.09□□□□□ -0.95
COPS3-204ENST00000462236 SPDYE5A6NIY4 337 aa9.08□□□□□ -0.96
COPS3-204ENST00000462236 LILRB3O75022 631 aa9.08□□□□□ -0.96
COPS3-204ENST00000462236 NDUFV2P19404 249 aa9.08□□□□□ -0.96
COPS3-204ENST00000462236 BANK1Q8NDB2 785 aa9.08□□□□□ -0.96
COPS3-204ENST00000462236 BCAMP50895 628 aa9.07□□□□□ -0.96
COPS3-204ENST00000462236 THSD4Q6ZMP0 1018 aa9.07□□□□□ -0.96
COPS3-204ENST00000462236 C14orf37Q86TY3 774 aa9.07□□□□□ -0.96
COPS3-204ENST00000462236 ZBTB3Q9H5J0 574 aa9.07□□□□□ -0.96
COPS3-204ENST00000462236 RFC5P40937 340 aa9.06□□□□□ -0.96
COPS3-204ENST00000462236 Q3C1V9 767 aa9.06□□□□□ -0.96
COPS3-204ENST00000462236 AQRO60306 1485 aaKnown RBP eCLIP9.06□□□□□ -0.96
COPS3-204ENST00000462236 CCDC88BA6NC98 1476 aa9.05□□□□□ -0.96
COPS3-204ENST00000462236 SOCS7O14512 581 aa9.05□□□□□ -0.96
COPS3-204ENST00000462236 MORN1Q5T089 497 aa9.05□□□□□ -0.96
COPS3-204ENST00000462236 TIMELESSQ9UNS1 1208 aa9.05□□□□□ -0.96
COPS3-204ENST00000462236 SALL2Q9Y467 1007 aaPredicted RBP9.05□□□□□ -0.96
COPS3-204ENST00000462236 WDR97A6NE52 1622 aa9.05□□□□□ -0.96
COPS3-204ENST00000462236 MTMR2Q13614 643 aa9.04□□□□□ -0.96
COPS3-204ENST00000462236 PCDHB15Q9Y5E8 787 aa9.04□□□□□ -0.96
COPS3-204ENST00000462236 POLA1P09884 1462 aaPredicted RBP9.03□□□□□ -0.96
COPS3-204ENST00000462236 APLP1P51693 650 aa9.03□□□□□ -0.96
COPS3-204ENST00000462236 PCDHGC3Q9UN70 934 aa9.03□□□□□ -0.96
COPS3-204ENST00000462236 NUTM2BA6NNL0 878 aaPredicted RBP9.02□□□□□ -0.97
COPS3-204ENST00000462236 NUTM2EB1AL46 878 aaPredicted RBP9.02□□□□□ -0.97
COPS3-204ENST00000462236 NR1I2O75469 434 aa9.02□□□□□ -0.97
COPS3-204ENST00000462236 HRCP23327 699 aa9.02□□□□□ -0.97
COPS3-204ENST00000462236 QPCTQ16769 361 aa9.02□□□□□ -0.97
COPS3-204ENST00000462236 NUTM2DQ5VT03 806 aaPredicted RBP9.02□□□□□ -0.97
COPS3-204ENST00000462236 NUTM2AQ8IVF1 878 aaPredicted RBP9.02□□□□□ -0.97
COPS3-204ENST00000462236 KCTD12Q96CX2 325 aaKnown RBP9.02□□□□□ -0.97
COPS3-204ENST00000462236 WBP1LQ9NX94 342 aa9.01□□□□□ -0.97
COPS3-204ENST00000462236 PCDHB3Q9Y5E6 796 aa9.01□□□□□ -0.97
COPS3-204ENST00000462236 SYNJ1O43426 1573 aa9□□□□□ -0.97
COPS3-204ENST00000462236 APBB1O00213 710 aa9□□□□□ -0.97
COPS3-204ENST00000462236 MCM6Q14566 821 aa9□□□□□ -0.97
COPS3-204ENST00000462236 CSPP1Q1MSJ5 1256 aa9□□□□□ -0.97
COPS3-204ENST00000462236 MYT1LQ9UL68 1186 aa9□□□□□ -0.97
COPS3-204ENST00000462236 SLC27A5Q9Y2P5 690 aa9□□□□□ -0.97
COPS3-204ENST00000462236 C6orf229H3BNL8 230 aa8.99□□□□□ -0.97
COPS3-204ENST00000462236 GUCA2AQ02747 115 aa8.99□□□□□ -0.97
COPS3-204ENST00000462236 RTL5Q5HYW3 569 aaPredicted RBP8.99□□□□□ -0.97
COPS3-204ENST00000462236 DESI1Q6ICB0 168 aa8.99□□□□□ -0.97
COPS3-204ENST00000462236 RETREG3Q86VR2 466 aa8.99□□□□□ -0.97
COPS3-204ENST00000462236 HLA-CQ95604 372 aa8.99□□□□□ -0.97
COPS3-204ENST00000462236 KIF13AQ9H1H9 1805 aa8.98□□□□□ -0.97
COPS3-204ENST00000462236 CABLES1Q8TDN4 633 aa8.98□□□□□ -0.97
COPS3-204ENST00000462236 PUS10Q3MIT2 529 aaKnown RBP8.97□□□□□ -0.97
COPS3-204ENST00000462236 FBXO31Q5XUX0 539 aaPredicted RBP8.97□□□□□ -0.97
COPS3-204ENST00000462236 BRICD5Q6PL45 260 aa8.97□□□□□ -0.97
COPS3-204ENST00000462236 HELBQ8NG08 1087 aaPredicted RBP8.97□□□□□ -0.97
COPS3-204ENST00000462236 ZMYND15Q9H091 742 aa8.97□□□□□ -0.97
COPS3-204ENST00000462236 SNAPC4Q5SXM2 1469 aa8.96□□□□□ -0.97
COPS3-204ENST00000462236 MAGI1Q96QZ7 1491 aaPredicted RBP8.96□□□□□ -0.97
COPS3-204ENST00000462236 RAD54L2Q9Y4B4 1467 aa8.96□□□□□ -0.97
COPS3-204ENST00000462236 FMNL1O95466 1100 aaPredicted RBP8.96□□□□□ -0.98
COPS3-204ENST00000462236 SCUBE3Q8IX30 993 aa8.96□□□□□ -0.98
COPS3-204ENST00000462236 PBRM1Q86U86 1689 aa8.96□□□□□ -0.98
COPS3-204ENST00000462236 AP1G2O75843 785 aa8.95□□□□□ -0.98
COPS3-204ENST00000462236 USB1Q9BQ65 265 aaKnown RBP8.95□□□□□ -0.98
COPS3-204ENST00000462236 A6NJR5 290 aa8.94□□□□□ -0.98
COPS3-204ENST00000462236 UBTFP17480 764 aaKnown RBP8.94□□□□□ -0.98
COPS3-204ENST00000462236 BLOC1S3Q6QNY0 202 aa8.94□□□□□ -0.98
COPS3-204ENST00000462236 THAP11Q96EK4 314 aa8.94□□□□□ -0.98
COPS3-204ENST00000462236 PRM3Q9NNZ6 103 aa8.94□□□□□ -0.98
COPS3-204ENST00000462236 PRR7Q8TB68 274 aa8.93□□□□□ -0.98
COPS3-204ENST00000462236 SYNJ2O15056 1496 aa8.93□□□□□ -0.98
COPS3-204ENST00000462236 GAPVD1Q14C86 1478 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms