RNA–Protein interactions for RNA: ENST00000254181.8

USP29-201, Transcript of ubiquitin specific peptidase 29, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP29, Length 3,705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP29-201ENST00000254181 RSF1Q96T23 1441 aaPredicted RBP9.35□□□□□ -0.91
USP29-201ENST00000254181 RGL2O15211 777 aa9.35□□□□□ -0.91
USP29-201ENST00000254181 CALRP27797 417 aaKnown RBP9.35□□□□□ -0.91
USP29-201ENST00000254181 GTF2F1P35269 517 aaKnown RBP eCLIP9.35□□□□□ -0.91
USP29-201ENST00000254181 RETREG2Q8NC44 543 aa9.35□□□□□ -0.91
USP29-201ENST00000254181 RASSF4Q9H2L5 321 aa9.35□□□□□ -0.91
USP29-201ENST00000254181 OGFRQ9NZT2 677 aa9.35□□□□□ -0.91
USP29-201ENST00000254181 RNF123Q5XPI4 1314 aa9.35□□□□□ -0.91
USP29-201ENST00000254181 EFCC1Q9HA90 598 aa9.34□□□□□ -0.91
USP29-201ENST00000254181 SMC4Q9NTJ3 1288 aa9.34□□□□□ -0.91
USP29-201ENST00000254181 KANK4Q5T7N3 995 aaPredicted RBP9.34□□□□□ -0.91
USP29-201ENST00000254181 C10orf67Q8IYJ2 551 aa9.34□□□□□ -0.91
USP29-201ENST00000254181 PPP1R9BQ96SB3 815 aa9.34□□□□□ -0.91
USP29-201ENST00000254181 CARD10Q9BWT7 1032 aa9.34□□□□□ -0.91
USP29-201ENST00000254181 MCM5P33992 734 aa9.34□□□□□ -0.91
USP29-201ENST00000254181 GET4Q7L5D6 327 aaPredicted RBP9.33□□□□□ -0.92
USP29-201ENST00000254181 NME8Q8N427 588 aa9.33□□□□□ -0.92
USP29-201ENST00000254181 FEZ1Q99689 392 aa9.33□□□□□ -0.92
USP29-201ENST00000254181 IRF5Q13568 498 aa9.33□□□□□ -0.92
USP29-201ENST00000254181 HS1BP3Q53T59 392 aa9.33□□□□□ -0.92
USP29-201ENST00000254181 CCDC181Q5TID7 509 aa9.33□□□□□ -0.92
USP29-201ENST00000254181 PPP4R3CPQ6ZMV5 832 aa9.33□□□□□ -0.92
USP29-201ENST00000254181 BCL2L12Q9HB09 334 aa9.33□□□□□ -0.92
USP29-201ENST00000254181 CNTLNQ9NXG0 1405 aa9.33□□□□□ -0.92
USP29-201ENST00000254181 CCDC96Q2M329 555 aa9.33□□□□□ -0.92
USP29-201ENST00000254181 C20orf194Q5TEA3 1177 aa9.33□□□□□ -0.92
USP29-201ENST00000254181 DRC1Q96MC2 740 aa9.33□□□□□ -0.92
USP29-201ENST00000254181 HSP90AB3PQ58FF7 597 aa9.32□□□□□ -0.92
USP29-201ENST00000254181 ZNF662Q6ZS27 426 aa9.32□□□□□ -0.92
USP29-201ENST00000254181 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.32□□□□□ -0.92
USP29-201ENST00000254181 ATL2Q8NHH9 583 aa9.32□□□□□ -0.92
USP29-201ENST00000254181 PIK3R5Q8WYR1 880 aa9.32□□□□□ -0.92
USP29-201ENST00000254181 DNAJC5Q9H3Z4 198 aa9.32□□□□□ -0.92
USP29-201ENST00000254181 CHGAP10645 457 aaKnown RBP9.32□□□□□ -0.92
USP29-201ENST00000254181 SLC20A2Q08357 652 aa9.32□□□□□ -0.92
USP29-201ENST00000254181 MYBPC2Q14324 1141 aa9.32□□□□□ -0.92
USP29-201ENST00000254181 CTR9Q6PD62 1173 aa9.32□□□□□ -0.92
USP29-201ENST00000254181 YY1AP1Q9H869 796 aa9.32□□□□□ -0.92
USP29-201ENST00000254181 SETD5Q9C0A6 1442 aa9.32□□□□□ -0.92
USP29-201ENST00000254181 NOM1Q5C9Z4 860 aaKnown RBP9.31□□□□□ -0.92
USP29-201ENST00000254181 TRAIPQ9BWF2 469 aa9.31□□□□□ -0.92
USP29-201ENST00000254181 SUGT1Q9Y2Z0 365 aa9.31□□□□□ -0.92
USP29-201ENST00000254181 TEX35Q5T0J7 233 aa9.31□□□□□ -0.92
USP29-201ENST00000254181 CEP83Q9Y592 693 aa9.31□□□□□ -0.92
USP29-201ENST00000254181 RB1CC1Q8TDY2 1594 aa9.31□□□□□ -0.92
USP29-201ENST00000254181 TESPA1A2RU30 521 aaPredicted RBP9.31□□□□□ -0.92
USP29-201ENST00000254181 MAP4K4O95819 1239 aaPredicted RBP9.31□□□□□ -0.92
USP29-201ENST00000254181 SSFA2P28290 1259 aa9.31□□□□□ -0.92
USP29-201ENST00000254181 SSR1P43307 286 aaKnown RBP9.31□□□□□ -0.92
USP29-201ENST00000254181 CLUAP1Q96AJ1 413 aa9.31□□□□□ -0.92
USP29-201ENST00000254181 SLC26A8Q96RN1 970 aa9.31□□□□□ -0.92
USP29-201ENST00000254181 NCAPD3P42695 1498 aa9.31□□□□□ -0.92
USP29-201ENST00000254181 PAX3P23760 479 aa9.3□□□□□ -0.92
USP29-201ENST00000254181 CDCA7LQ96GN5 454 aa9.3□□□□□ -0.92
USP29-201ENST00000254181 PHLDB1Q86UU1 1377 aa9.3□□□□□ -0.92
USP29-201ENST00000254181 SOGA1O94964 1423 aa9.3□□□□□ -0.92
USP29-201ENST00000254181 KRT222Q8N1A0 295 aa9.3□□□□□ -0.92
USP29-201ENST00000254181 TNPO1Q92973 898 aaKnown RBP9.3□□□□□ -0.92
USP29-201ENST00000254181 MTA3Q9BTC8 594 aa9.3□□□□□ -0.92
USP29-201ENST00000254181 ECM2O94769 699 aaPredicted RBP9.3□□□□□ -0.92
USP29-201ENST00000254181 MAPK8IP3Q9UPT6 1336 aa9.29□□□□□ -0.92
USP29-201ENST00000254181 CEP164Q9UPV0 1460 aa9.29□□□□□ -0.92
USP29-201ENST00000254181 SEC24BO95487 1268 aa9.29□□□□□ -0.92
USP29-201ENST00000254181 MCTP1Q6DN14 999 aa9.29□□□□□ -0.92
USP29-201ENST00000254181 GOLGA6CA6NDK9 693 aa9.29□□□□□ -0.92
USP29-201ENST00000254181 GOLGA6BA6NDN3 693 aa9.29□□□□□ -0.92
USP29-201ENST00000254181 CCDC172P0C7W6 258 aa9.29□□□□□ -0.92
USP29-201ENST00000254181 GOLGA6DP0CG33 693 aa9.29□□□□□ -0.92
USP29-201ENST00000254181 SPATA32Q96LK8 384 aa9.29□□□□□ -0.92
USP29-201ENST00000254181 GOLGA6AQ9NYA3 693 aa9.29□□□□□ -0.92
USP29-201ENST00000254181 RAB11FIP3O75154 756 aa9.29□□□□□ -0.92
USP29-201ENST00000254181 PDE3BQ13370 1112 aa9.29□□□□□ -0.92
USP29-201ENST00000254181 WDR43Q15061 677 aaKnown RBP eCLIP9.29□□□□□ -0.92
USP29-201ENST00000254181 OTUD6BQ8N6M0 293 aa9.29□□□□□ -0.92
USP29-201ENST00000254181 CEP120Q8N960 986 aa9.29□□□□□ -0.92
USP29-201ENST00000254181 VTI1AQ96AJ9 217 aa9.29□□□□□ -0.92
USP29-201ENST00000254181 NCAPGQ9BPX3 1015 aa9.29□□□□□ -0.92
USP29-201ENST00000254181 ANTXR1Q9H6X2 564 aa9.29□□□□□ -0.92
USP29-201ENST00000254181 CWC15Q9P013 229 aaKnown RBP9.29□□□□□ -0.92
USP29-201ENST00000254181 C22orf23Q9BZE7 217 aa9.28□□□□□ -0.92
USP29-201ENST00000254181 UNCXA6NJT0 531 aa9.28□□□□□ -0.92
USP29-201ENST00000254181 SH3BP5O60239 455 aa9.28□□□□□ -0.92
USP29-201ENST00000254181 NOLC1Q14978 699 aaKnown RBP eCLIP9.28□□□□□ -0.92
USP29-201ENST00000254181 MPHOSPH10O00566 681 aaKnown RBP9.27□□□□□ -0.93
USP29-201ENST00000254181 GPS2Q13227 327 aa9.27□□□□□ -0.93
USP29-201ENST00000254181 ICE2Q659A1 982 aa9.27□□□□□ -0.93
USP29-201ENST00000254181 ZNF710Q8N1W2 664 aa9.27□□□□□ -0.93
USP29-201ENST00000254181 FEZ2Q9UHY8 353 aaPredicted RBP9.27□□□□□ -0.93
USP29-201ENST00000254181 ERBB3P21860 1342 aa9.27□□□□□ -0.93
USP29-201ENST00000254181 CAPN2P17655 700 aa9.27□□□□□ -0.93
USP29-201ENST00000254181 ZFYVE27Q5T4F4 411 aa9.27□□□□□ -0.93
USP29-201ENST00000254181 KRBA2Q6ZNG9 492 aa9.27□□□□□ -0.93
USP29-201ENST00000254181 SIRT1Q96EB6 747 aa9.27□□□□□ -0.93
USP29-201ENST00000254181 NOL10Q9BSC4 688 aaKnown RBP9.27□□□□□ -0.93
USP29-201ENST00000254181 SATB1Q01826 763 aa9.26□□□□□ -0.93
USP29-201ENST00000254181 RPS6KL1Q9Y6S9 549 aa9.26□□□□□ -0.93
USP29-201ENST00000254181 NINLQ9Y2I6 1382 aa9.26□□□□□ -0.93
USP29-201ENST00000254181 NPHP1O15259 732 aa9.26□□□□□ -0.93
USP29-201ENST00000254181 NBPF9Q3BBW0 867 aa9.26□□□□□ -0.93
USP29-201ENST00000254181 ZNF280DQ6N043 979 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms